Gene Ddes_0567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0567 
Symbol 
ID7284239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp686249 
End bp686926 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content63% 
IMG OID643581363 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_002479155 
Protein GI220903843 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID[TIGR02154] phosphate regulon transcriptional regulatory protein PhoB 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.463355 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCAAC AGATATTGAT AGTTGAAGAT GAAGCCGACA TTCGCGAGCT TTTGCGCTTT 
AATCTCGAGC GTGAGGGCTT CAGCGTTCTG GAGGCGGCGG ATGGCAACGA GGCGCTCAGG
CTGGCCCGCC AGCATCTGCC GGACCTCATG CTGCTGGACG TCATGATGCC CGGGCCGGAC
GGGTTCGAGA TCTGCCGCCT TTTGGGGGCG CAGGCTGAAA CCGCCCATAT CCCCGTGCTT
ATGCTGACGG CCAGAGGCGA AGAAATGGAC CGCGTGGTGG GCCTGAGCCT TGGCGCGGAC
GATTATGTGG TCAAACCTTT CAGCGTGCGT GAGCTTATGC TGCGCATCCG GGCAGTGCTG
CGGCGCGGGA CGCGCAGCGG CGAAAGCCCG GTGCTGGAAC GCCACGGCAT ACGCCTGCGC
CCCGATGCCC ATACGGCGGA GGCGCACGGC GAAGAACTGC AGTTGACAGC CACGGAGTTT
CGCCTGCTGG AAGACCTGCT GCGCCATGCC GGGTCGGTGC GCACGCGTGA GCAGCTGCTC
AACAAGGTAT GGGGCTATTC CTTTGAAGGA TATGCCCGCA CGGTGGATAC CCACGTGCGC
CGCCTGCGCG CCAAGCTGGG GCATGCGGCC TCCATGCTGG AGACCGTGCG CGGGGTAGGC
TACAGGATAA AGGAATAG
 
Protein sequence
MSQQILIVED EADIRELLRF NLEREGFSVL EAADGNEALR LARQHLPDLM LLDVMMPGPD 
GFEICRLLGA QAETAHIPVL MLTARGEEMD RVVGLSLGAD DYVVKPFSVR ELMLRIRAVL
RRGTRSGESP VLERHGIRLR PDAHTAEAHG EELQLTATEF RLLEDLLRHA GSVRTREQLL
NKVWGYSFEG YARTVDTHVR RLRAKLGHAA SMLETVRGVG YRIKE