| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dde_0239 |
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| Symbol | |
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| ID | 3755099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007519 |
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| Strand | + |
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| Start bp | 223266 |
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| End bp | 224963 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637781099 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_386735 |
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| Protein GI | 78355286 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCAGGTGG TCATGAGCCA GCTACAAGAT GAAATCATCC TTTTTGCCCC CGATGACGCA
CATGAGGCAC CGCGGCAGTC CGCCGGCGGT GCATGGGATA TCCTTGTGGT GGATGACGAC
GAGGCTGTCC ATGCGGTGAC CCGCATGGTG CTGCAGCATC TGGTGTTTGA CGGGCGCAGC
ATACGGCTTG ATCATGCCGG CAGTGCGGCC GGTGCGGAAG AGAAGCTCCG CCGGAACACC
TATGCTCTGG TTCTTCTTGA TGTGGTGATG GAGACCGATA ACGCCGGACT GGAGCTTGTG
CGCTGCATCC GTGATCTTCC GGCCCTTGCG GAGACCAGAA TAGTGCTCTG CACCGGGCAT
CCGGGACAGG CGCCGGAAGA GCGCATCATG ATGGATTACG ACATAGATGA TTACCGTGAC
AAAAGCGGAC TGACGTCGCA GCGGCTCAAG ACTGCCGTGT TTGCCGCTCT GCGCAGTCAT
CAGCGGCTGT GCGAGAACAG AGACCAGCGG CTGGAGCTGG CCCGCAGCCG CAACCGCCTG
CAGGCCCTCA TGGGGGCGCT GCCTTCGGCC ATTGTGGGGA TAAGCGCGGG GGGGCACATC
ATCTTGTGGA ATCCTGCGGC GGAACGGCTT TCCGGCCTGC CCGAGGGCGA AGTGACCGGC
CGTGACTTTG CGCAGCCGCT TGAGCAGCTG TCCGTAGATG CTGCTCTGCT GCACCGCGTC
ATGCAGGACG GCGAAACCTA CACGCGCCTG CGCGAACGGG TGACTCTGCC GCAGGGCACA
ACCATCGTGC GGGACCTGCA TATCCACCCC GTGCCGCAGG CAGGGGGTGC GGTTGTGCGG
CTGGACGATG TTTCGGTGCG TGACCGTATG GAAAACCTGA TGGTGCAGAG CGAAAAAATG
CTCTCGCTGG GCAGCATGGC CGCAGGTATG GCGCATGAAC TGAACAATCC ACTGGGGGCA
GTGCTGCAGG GGGTGGATAC CGTGCGCCGC AGACTGGACG GCGCTCTGCC CGCCAACGTG
CGGGCCGCGC ACGAAACGGG TCTTACGCTG GCCGCTCTGG GACGTTACAT GGAACAGCGC
AGGATTCTGT ATTTTTTGGA CGGCATAGAA CATGCCGGAC GCCGTGCCGC CGTCATTGTG
CGTGATATGC TGGATTTCAG CCGCCAGAGC GGTGAAAAAC AGCCCGCAGA CGTGCACCGG
CTTATTGCTG CCGCGCTGGA ACTGGCCGAA AAAAGTTATG ATCTGCACGA CGCATGGGAT
TTCCGCAATG TGCAGGTGGA GCGCTGTTTC GCGTCGTCGC TGCCGCAGAT TCCCTGCGCT
GCGCAGGAAA TTGAACAGGT GCTGCTGAAC CTGTTTCACA ACGCCGCGCA GGCCATGACT
CCCGCAGTCA TGCAGAACAG AACCCCGCGG CTGTGCATCC GCACGGCTGC TCTGGAGACG
GGCGTGTGCA TAGAAGTGGA AGACAACGGG CCGGGAATCC CCGAAGACAT CTCAAAACGG
GTGTTTGATC CGTTTTTTAC CACCAAGCCG CCGGGCAAAG GTACCGGACT GGGCCTCTCA
GTTTCTTTTC ATATCGTGGT GGACCGCCAC GGTGGAGAGT TTCATATGAT TTCTCCGGAA
TCGGGCGGAG CCTGCTTCCG CATACTGCTG CCGTACACAG CCGGCCGTGG CGCGGGGGCA
CAGCAGCAGG CCTGTTGA
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| Protein sequence | MQVVMSQLQD EIILFAPDDA HEAPRQSAGG AWDILVVDDD EAVHAVTRMV LQHLVFDGRS
IRLDHAGSAA GAEEKLRRNT YALVLLDVVM ETDNAGLELV RCIRDLPALA ETRIVLCTGH
PGQAPEERIM MDYDIDDYRD KSGLTSQRLK TAVFAALRSH QRLCENRDQR LELARSRNRL
QALMGALPSA IVGISAGGHI ILWNPAAERL SGLPEGEVTG RDFAQPLEQL SVDAALLHRV
MQDGETYTRL RERVTLPQGT TIVRDLHIHP VPQAGGAVVR LDDVSVRDRM ENLMVQSEKM
LSLGSMAAGM AHELNNPLGA VLQGVDTVRR RLDGALPANV RAAHETGLTL AALGRYMEQR
RILYFLDGIE HAGRRAAVIV RDMLDFSRQS GEKQPADVHR LIAAALELAE KSYDLHDAWD
FRNVQVERCF ASSLPQIPCA AQEIEQVLLN LFHNAAQAMT PAVMQNRTPR LCIRTAALET
GVCIEVEDNG PGIPEDISKR VFDPFFTTKP PGKGTGLGLS VSFHIVVDRH GGEFHMISPE
SGGACFRILL PYTAGRGAGA QQQAC
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