| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0064 |
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| Symbol | |
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| ID | 3683476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 80617 |
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| End bp | 85761 |
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| Gene Length | 5145 bp |
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| Protein Length | 1714 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637715391 |
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| Product | Signal transduction histidine kinase |
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| Protein accession | YP_320585 |
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| Protein GI | 75906289 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG3920] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.274411 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCAAC GTTTCCCTCT AACCATTTTA CTGATTGATG ATTGCGCCGA AGATAGGGAG
ATATATCGTT TTTTTTTGCA GCAGGATAGA TTACATACCT ATGAGATTTT TCAATTGGAG
ACAGCACAAG AGGCAATGAC ATGGTGTGAG CAACAGACAC CAGATGTAAT TTTGCTGGAT
TATTTACTGC CCGACTACGA TGGATTAGAG TTTTTACAAC AACTTAGGGA ACACCTAAAT
AATAGCCAAT CTGCTGTGAT CATGCTCACA GGACAAGGGG ACGAAAGTAT CGCCGTCTGT
GCGATGAAAA ATGGCGCTCA AGATTATTTG GTGAAAAATT CTCTTACCCC GGAAACCTTA
CAAAGTGCAA TTCATTATGC TGTAGAACGG ATGCTGCTGA CAAGACAGTT AGAACAAAGT
CGGCAACAGC AACAACTAAT GGTGGCGATC GCTTTAAGAA TTAGGCAATC CCTGAAGCTA
GAAGATATTT TGAGTGTCAC AGTCGCGGAA GTGCGCCAGT TTTTACAAGC AGACCGGGTA
CTAATCTATC AATTTCAACC CGATATGAGT GGAATTGTGG TTGCAGAGTC TATACTTCCC
GGTTGGATAG CCACGAAAGG AGCGCAAATT GAAGATAGGT GCTTTCAAGA TAGTGCAGGA
CATAACCATC AAGTAAAAAA ACGAGCGATC AATGATGTTT ATCAGGCAGG CTTAACGAAC
TGTTATTTAG AACTACTAGA GCAGTTTCAA GTTAAAGCCA CTTTGATAGT ACCCATTATG
GTGACAAATC AATCATGGGG ATTATTAATT GCTCACCAAT GTGCTGCACC CCATCAATGG
CAGTCATTTG AACTGGACTT ATTGGAGCAG TTGGCGGTGC AGATAGCGAT CGCTATTCAG
CAAGCAAGTG CCTATGCGCA AATACAGACA GAACTACAAG AACGAAAACG AGTGGAAGCA
ACTCTGCGCG AGAGCGAACA ACGTTTTCGC CAGATGGCTG ATACTGCTCC CGTACTGATT
TGGATGTCGG GACTTGATAA ACTTTGCTAC TACTTCAATA AAACTTGGTT AGATTTTACT
GGCAAAACCT TAGAACAAGA AGTCGGTGAT GGTTGGGCGA AAGGAGTACA TCCCGATGAC
TTAAAAGATT GCTTAGACAT TTATGTCAAT GCCTTTGATA CCCGCCAAAA TTTTCAAATG
GAATATCGGC TCAAACGCTT TGACGGCGAA TATTGTTGGA TTTTGGATAC AGGCACTCCT
CGGTTCACCA CTGAAGGAGA GTTTCTGGGT TATATCGGTT CCTGTGTAGA TATTAGCGAA
CGAAAGCAAG TAGAAGCAGC CTTACAGCAG AATGAAGAGC GATTAACTAT GGCTCTAGAC
GCTGCGTGTA TGGGTAACTG GGAATGGAAT ATTCAAACAG GTGGAATTCA CTGGTCGGAG
AATTTGGAAA AACTATTTGG TATGGTTCCA GGGAGCTTCA ATGGTCATTT TGAAACGGTT
GTGTCGCTGA TACACCCAGA TGATCGGCAG AGGGTTTTAC AATCCATTAA TTGTGCTGTC
TATAACAGAG AAGATTTCAA CATCGAATTT CGGTTTATTA AACTTGATGG TACGCCACGT
TGGGCGCTCA GTAGAGGTAA AGTGTTCTAC GACCGAAACG GTAACCCTCT GCGAATGAGT
GGTATAGATT TTGATATCAC AGAACGTAAA CAGGCGGAAT CAAAGCTCCA AGAGAGTGAA
GGGCGGTTTC AGGCGTTTAT GAATAACAGC CCCTCAGCTT CCTGGATTAC CGATGACCAC
GGTCGAATAC TTTATCTGAG CCAGACCTAT GTCCGTACCT TTCAATTGCC ATTTGACAAA
GTAGAGAATG TCATGGGCAA AACAGTTTTT GAGCTTTATG CCCCAGAAAT AGCCCAGCAG
TTTTTGGATA ACATTCACCA GGTGGCACAG ACGCAACAAA TCCTCGAAAC CATTGAGAAG
GCTCCCAGAT TGGACGGTAC ATTGGGGGAT TTTTTAGTCT ATAAATTCCC CTTACCTGGG
ACTACGGGGG AATTATTGAT TGGTGGTGTA GCAGTTGATA TTAGCGATAA AATTCGGGCA
GAACAGGCAT TACAAAAGCT TAATCAAGAA CTTGAAGCGA GAGTGGCAGA ACGTACTGCC
GCTTTAAGGG AAAGCGAAGA ACGCTGGCAT TTAGCGCTAA GAGGCAGCAA TGATGGGATT
TGGGACAGAA ACATCACAAC TAATGAAGTT TTCTTCTCGA TTCGTTGGGA AGAAATGTTG
GGCTGTAGCA GTCAGGAACT GAGCCGAAAT CGAGAATCAT GGTTAAGCCG GATTCATCCT
GATGATCATG ATCGCATTAT GAGGGCGATC GCCGACCATT TAGCTCACAA AACACCCTTT
TTCCAAGAAG AATATCGGAT ACAGCGCAAA GATGGCTCCT ATATATGGAT ATTAGATCGA
GGTCAGGCTT TATGGGATGA ATCAGGCAAT GCCATTCGCA TGAGCGGCTC GGCAACAGAT
ATTACTAAAC GCAAGGAGAC AGAAAATCAG TTATTAAACA TTTCCAGATT GCAACACGCA
ATTCTTTCTA GCATCGATTA TGCAGTCATT TCTACCGATT CCGACGGCAT AATTCAAACT
TTTAACCTTG CTGCTCAAAG GATGTTGGGT TACACAGCCG ATGAGGTGAT TGGTAAGTTA
ACACCAAACA GCTTTCATGA GCCAGAGGAA CTCAGACAAC GGATGAATGA ACTGAAACAA
GAGATGGGTA GAGAAATTAC CCCTCAAGAT TTCATGGTCA AAACCCAGCA AGATAGTGAT
GAATTAGAAT GGACTTTTAT TCGTAAAGAT GGTTCGCGTT TCCCTGTGGC TCTCTCGGTT
AAACCCATGT TTAATCAAGA AGGAAAGCCT ATTGGTGGTG TGGGAATTGC CAAAAATATT
ACTCAACAAA AACAGATAGA AGCTCAACTT CGCAAAAATA CCTCTACTCT TGCTGCGGCA
CAACGGATTG CTCATCTGGG TAGTTGGGAA CTGGATTTGT CAACGCACAA CTTAATCTGG
TCACAAGAGG TTTTTCGCAT ATTTGGCCGC CATCCTGAAT CCGGGACACC AAGTTACGAC
GAAATGCTTG ATTGTATTCA TCCGGATGAT CGCAACTACC GCGATGTTGT CTTACATCAA
GCTATTACAC AAAGACAAGC TTATGAACTA GAGTATCGTT TTTATCGTGC TGATGGCAGT
TTGGGTTATT TACTATCACG AGGCGAAGTC ATATTAGACA CTCATGGGCA ACCATACCAG
TTAATCAGCA CTATCCTAGA CATTACCGAG CGTAAACAAA CAGAAGAACG ACTACGTAAC
CTTTCAGACC GATTGACCTT GGCAGTCAGT TCAGCCAATC TTGGTATTTG GGACTGGGAT
ATGATACAGG AAGCGGAATG GGATGACCGA ATGTATGAAC TATATAATTT ACAACAGTCT
GAGAATAAGG CAAAGTACCA AGATTGGATA GATAGGCTCC ATCCAGATGA TCGAGATGAA
GCAATGATGG CCTTTGAAGA TGCCATAAAG GGAGTCAGAG AATTTGATAC AGAATTTCGG
ATTGTTCTTG AAAATGGCAA TATCCGCTTT ATCAAAGCCT CCGCTTTAGT TCAACGCAAT
GAGTGGGGCG AACCACTACG CATGGTCGGG ATTAACTATG ATATTACTGA GCGCAAACAA
GTAGAAGCTG CCTTACGGGA AAGTGAAAAG CGCTATGCTA CCTTGACAGA AGCGGCTCCC
GTTGCTATTT TTCGGCTTGA TACTGCTAGT AATTGTATTT ACGTCAACGA ACGTTGGAGT
TTAATGACAG GTAGACCAAC ACAAGCAGCA TTGAAGAAGG GATGGTTAGA AAATATCCAT
GAAGAAGATC GCTATCACCT GGTGGTAGAT TGTGCTGGCC TCTGCGGAAA ACAATGTGGT
TTATCGGAAA CTTGTCGGCG GGAAGTCAGA TATGTACGTC CAGATGGTAG CATCACTTGG
TTCTACATCC AGATAGTACC CGAAACCGAC CTAAATGGTA CAATCTTGGG TTATATAGGT
AGCTTGACAG ATATCACTAC CCGCAAAACA ATTGAGTCAG AAGTTATTCA CCATCGTGAT
TTGCGAGAAG CGATTTTTAA TGAATCAGCC GATGCTCTTT TTTTAGTAGA TAGAGATACG
CAATTGATTT TTGATTGTAA TGATCGTGCG GTTGATTTGT TTGAAGTTGC CAATAAAGAA
GAATTACTCA ATATTCAAGG TAATACACTA CAACGTTACC AATTTACTCC CGAACAATTG
GATGAAATTA CACAGGAACT GAATCAAAAA TCTTGGTGGA GTCGAGAAAT TGAATATGCC
ACCCGCAAAG GTAATTTCTT CTGGGGAAAT TTAGCTGCTA AACAAATTAC TGTAGCTGGT
AAGGGTATTA ATTTAGTACG ATTGTCTGAT ATTAGCGAAC AGCAAGCCGC ACATCGTGAA
CGCAAACAAG CGGTAGAACA AATACAGCGA TCGCTAGATG AAAAAGAAAC CTTACTCAAA
GAAATTCATC ATCGGGTAAA AAACAACCTG CAAATAATCT CTAGTTTGCT CAGGATGCAA
TCTAGACGTT CCTTTGATGA AACAACTTTG TTGCTATTTA CAGAATCTCA AAATCGTGTA
CAGTCGATGG CTTTGATTCA CGAGCAACTT TATCAGTCGG CAGACATTAA TCAAATCAAC
TTTAGCGACT ACATCAAAAA TCTGACAGAT AGCTTATTTC GTTGCTACGG GGTCAGTCAA
AAGAATATAA GGATCAATAT AGAAACAAAT AGCATTAAAT TGGATCTAGA TAATGCTATT
CCCTGCGGAT TAATCATTAA TGAGTTAGTT TCTAATTGTC TGAAGTACGC ATTTCCAGAA
CAAAACGAAG ACAATAATAT TACTATTTCC CTGGAAGCAG TCCCAGGAAA TCAATTAACT
CTCTTAGTTA AAGATAACGG TATTGGCATT CCCGAAACAT TAGATTGGGA AAATGCCAAC
TCTTTAGGCT TAAGAATTGT CAAAAACCTA GTCAGACAAC TCAAAGGCAA GATTCTTTTA
GAGTGCGATC GCGGTACTGC TTTCTCCATT CGCTTCCCCC AATAA
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| Protein sequence | MNQRFPLTIL LIDDCAEDRE IYRFFLQQDR LHTYEIFQLE TAQEAMTWCE QQTPDVILLD
YLLPDYDGLE FLQQLREHLN NSQSAVIMLT GQGDESIAVC AMKNGAQDYL VKNSLTPETL
QSAIHYAVER MLLTRQLEQS RQQQQLMVAI ALRIRQSLKL EDILSVTVAE VRQFLQADRV
LIYQFQPDMS GIVVAESILP GWIATKGAQI EDRCFQDSAG HNHQVKKRAI NDVYQAGLTN
CYLELLEQFQ VKATLIVPIM VTNQSWGLLI AHQCAAPHQW QSFELDLLEQ LAVQIAIAIQ
QASAYAQIQT ELQERKRVEA TLRESEQRFR QMADTAPVLI WMSGLDKLCY YFNKTWLDFT
GKTLEQEVGD GWAKGVHPDD LKDCLDIYVN AFDTRQNFQM EYRLKRFDGE YCWILDTGTP
RFTTEGEFLG YIGSCVDISE RKQVEAALQQ NEERLTMALD AACMGNWEWN IQTGGIHWSE
NLEKLFGMVP GSFNGHFETV VSLIHPDDRQ RVLQSINCAV YNREDFNIEF RFIKLDGTPR
WALSRGKVFY DRNGNPLRMS GIDFDITERK QAESKLQESE GRFQAFMNNS PSASWITDDH
GRILYLSQTY VRTFQLPFDK VENVMGKTVF ELYAPEIAQQ FLDNIHQVAQ TQQILETIEK
APRLDGTLGD FLVYKFPLPG TTGELLIGGV AVDISDKIRA EQALQKLNQE LEARVAERTA
ALRESEERWH LALRGSNDGI WDRNITTNEV FFSIRWEEML GCSSQELSRN RESWLSRIHP
DDHDRIMRAI ADHLAHKTPF FQEEYRIQRK DGSYIWILDR GQALWDESGN AIRMSGSATD
ITKRKETENQ LLNISRLQHA ILSSIDYAVI STDSDGIIQT FNLAAQRMLG YTADEVIGKL
TPNSFHEPEE LRQRMNELKQ EMGREITPQD FMVKTQQDSD ELEWTFIRKD GSRFPVALSV
KPMFNQEGKP IGGVGIAKNI TQQKQIEAQL RKNTSTLAAA QRIAHLGSWE LDLSTHNLIW
SQEVFRIFGR HPESGTPSYD EMLDCIHPDD RNYRDVVLHQ AITQRQAYEL EYRFYRADGS
LGYLLSRGEV ILDTHGQPYQ LISTILDITE RKQTEERLRN LSDRLTLAVS SANLGIWDWD
MIQEAEWDDR MYELYNLQQS ENKAKYQDWI DRLHPDDRDE AMMAFEDAIK GVREFDTEFR
IVLENGNIRF IKASALVQRN EWGEPLRMVG INYDITERKQ VEAALRESEK RYATLTEAAP
VAIFRLDTAS NCIYVNERWS LMTGRPTQAA LKKGWLENIH EEDRYHLVVD CAGLCGKQCG
LSETCRREVR YVRPDGSITW FYIQIVPETD LNGTILGYIG SLTDITTRKT IESEVIHHRD
LREAIFNESA DALFLVDRDT QLIFDCNDRA VDLFEVANKE ELLNIQGNTL QRYQFTPEQL
DEITQELNQK SWWSREIEYA TRKGNFFWGN LAAKQITVAG KGINLVRLSD ISEQQAAHRE
RKQAVEQIQR SLDEKETLLK EIHHRVKNNL QIISSLLRMQ SRRSFDETTL LLFTESQNRV
QSMALIHEQL YQSADINQIN FSDYIKNLTD SLFRCYGVSQ KNIRINIETN SIKLDLDNAI
PCGLIINELV SNCLKYAFPE QNEDNNITIS LEAVPGNQLT LLVKDNGIGI PETLDWENAN
SLGLRIVKNL VRQLKGKILL ECDRGTAFSI RFPQ
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