Gene Dd703_3909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd703_3909 
Symbol 
ID8087294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya dadantii Ech703 
KingdomBacteria 
Replicon accessionNC_012880 
Strand
Start bp4531219 
End bp4531941 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content54% 
IMG OID644838000 
ProductDNA-binding transcriptional activator DcuR 
Protein accessionYP_002989484 
Protein GI242241303 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG4565] Response regulator of citrate/malate metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAATG TACTGATCGT AGACGATGAC GCTATGGTGG CGGAGTTGAA CAAGTGTTAC 
CTGAGCCAGA TCTCGGGGTT TAGCTGCTAT GCGACGGTGC CCACGCTGCA GCAAGCGCGG
AATCTGCTGA TGCAGCCGGA TTGCGAGATA GACTTGGTTC TGCTGGATAT TTATATGCAG
CAGGACAACG GTCTGGATCT GTTGCCGACC ATCCGTGAAT TCAGCGAACA CACGGATGTG
ATCATCATTT CGTCGGCCAG CGATGTGTAC ACCATCAAAA AAGCGCTGCA TTACGGCGTG
GTGGATTATC TGATCAAGCC TTTCCAGTTC GCCCGTTTTG AACAGGCGCT GACCGCTTAC
CGCGAAGAAG CTAATCTGTT CAAACACCGG GACTTCGTGG CGCAGGCGGA TATCGATAAC
CTGATCCGCC GCACCAGCGG CAGCCCGGTA GCGGAGCGCA AGAAATTACC CAAAGGGCTG
ACCAGCCTGA CGTTGCGCAC GGTATGCGAG TGGATCGAGG GCAACCAGAA CACCGAGTTT
TCGACCGAAA TGCTGGCCAA TGCGATCGGC ATTTCTCGCG TGTCCTGCCG TAAATATCTG
ATCTATCTCG CTGAAACCGG TGTTTTGGCA ACCAACATTC TCTACGGTTC CACCGGTCGC
CCGGTTTATC TTTACCGGTT GCTGCCGGAA AAACAGGATG CGCTGCGCCA GTATTGCGAA
TAA
 
Protein sequence
MINVLIVDDD AMVAELNKCY LSQISGFSCY ATVPTLQQAR NLLMQPDCEI DLVLLDIYMQ 
QDNGLDLLPT IREFSEHTDV IIISSASDVY TIKKALHYGV VDYLIKPFQF ARFEQALTAY
REEANLFKHR DFVAQADIDN LIRRTSGSPV AERKKLPKGL TSLTLRTVCE WIEGNQNTEF
STEMLANAIG ISRVSCRKYL IYLAETGVLA TNILYGSTGR PVYLYRLLPE KQDALRQYCE