Gene Meso_2142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_2142 
Symbol 
ID4182454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp2295298 
End bp2296020 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content62% 
IMG OID638068038 
Producttwo component transcriptional regulator 
Protein accessionYP_674699 
Protein GI110634491 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.46457 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTACCC GTGAGGACAT CGTTGCCGAG GTGAATGCGC CGGCGGACGA TGCGCCGCAT 
CTCCTCGTCG TTGACGATGA CACGCGCATT CGCACGCTGC TCAAGCGTTT CCTAACCGAA
GAAGGGTTTC GGGTGACGGT GGCGGCAAAT GCCGCCGAAG CGCGCCGAAA GCTTGCCGGC
CTGGATTTCG ACCTCCTCGT CCTTGACGTC ATGATGCCGG GTGAGGACGG CGTGGGGCTG
ACGCGCAGCC TCCGTCAGGA ACGTGACGTG CCAATTCTTA TGCTGACGGC GCTTTCCGAA
ACCGAAAGCC GCGTGACGGG CTTGCAAGCG GGCGCCGACG ATTATCTGCC AAAGCCGTTC
GACCCGCGTG AACTCGTGCT GCGCGTCAAC AATATCCTTC GCCGTGGTGG ACAGCCGACC
ACGCCGAAGC TGGAGCAGAT TGTCTTCGGT CCCTACACCT TCCAGATCAC CAGGCGAGAG
CTGAAACGCG CCGGCGAGCT ATTGAAACTG ACCGAACGCG AGCGTGAAAT CATGGCCATC
TTTGCCGAGC GCGCAGGCGA GACCATTCCA CGCCACGAGC TGGTGGGCGA GGATTCGGAG
GTGGGCGAAC GCACGATCGA CGTGCAGATC AACCGGCTGC GCCGCAAGAT CGAGCGCGAT
CCCGCCAACC CGATCTGGCT GCAGACCGTA CGCGGAATCG GCTATCGCCT GAGCATTGAG
TAA
 
Protein sequence
MITREDIVAE VNAPADDAPH LLVVDDDTRI RTLLKRFLTE EGFRVTVAAN AAEARRKLAG 
LDFDLLVLDV MMPGEDGVGL TRSLRQERDV PILMLTALSE TESRVTGLQA GADDYLPKPF
DPRELVLRVN NILRRGGQPT TPKLEQIVFG PYTFQITRRE LKRAGELLKL TEREREIMAI
FAERAGETIP RHELVGEDSE VGERTIDVQI NRLRRKIERD PANPIWLQTV RGIGYRLSIE