Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2006 |
Symbol | |
ID | 4459672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 2456112 |
End bp | 2457521 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639702772 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_846124 |
Protein GI | 116749437 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR01386] heavy metal sensor kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCCA TCCGGGCGCG CCTCACCCTT TGGTACACGA GCCTCCTGAC CGTGACCCTC GTCCTGCTCG GGGGGACCGC ATACGCTCTC CTTTCCTACA GCCTGTCCCA CGAAGTGGAT GCGGCGCTCA ACGGCGTTGC ACGGTCTCTG ACCGAACGCG CGCACGGTCC GTCCGCCTTT GTTCCCGCCG AAGTGGACGA GGCCTTTCGC CGCTTTTTCG GGTTTTCACC GTGGAACCGG TACTTCCAGC TCTTCGATCC CCTGGGACAC CGAGACCCGC GCCAGCCCGC GCCGCATTCG GGAAGGCTGC CGCTCAGCGG CGAGGCCCTG AACAACGCCG CCAATGGAAT CTCCACCTAC GAAACGGTGC CGGGTTCCGA GGAACACCCG GTGCGCGTCC TCACCATGCC GGTCATGGAG GGAGGGCGGA TGGTCAACCT GGTCCAGGTG GGGATGTCTC TCAAGAGTGT CCTCGAGACG CGCACGCGGT TTCTGCTCAT CATGGCCGTG CTTTTCCCCG TCGGCCTGGT GCTTGCCGCG ACGGGCGGGC TGCTGCTGGC GCGACGGGCG TTGCGGCCCG TGGACCGGAT GGCGGAGGCT GCCCGGCGTA TCAGTGCCGA ACATCTTGCC GAACGCATCG GCGGAACCGG CGCCGGCGAT GAACTGGACC GGCTGGCGTC GACTCTGAAC GAAATGCTGG GGCGCCTGGA TACGGCGTTC ACACAGGTCA GGCGTTTCAG CGCGGACGCG TCTCACGAGC TGCAGACGCC CCTCACCATA CTCAAGGGGG AACTGGAAGT CGCGCTTCGC TCGCCCAGAA CCCCGGAAGA ATACCAGGCC GTTCTGAAGA GTGCGCTCGA GGAGATCGAC CGGATCGCCC ACCTGGTGGA AGGACTTTTG CTGCTTGCCA GGGCCGAAGC CGGCGTCCTG CGCATGGACC GCCGGCCGGT GGACCTGGAG CAGCTTGCCG AAGAAGTCTA CTGGCGGCTC AAGGTATTGG CGGACTCACG ATCCATCCGA TTCGACAGCG AGCTTGCCGA ACCGGTCGTG GTCCCTGGAG ACCGTGAAAG GCTGAGGCGG CTGCTGTTCA ATCTCGTCGA CAACGCCATC AAGTACACCC GGCCGGGAGG CGTCGTGCGG CTTTCCGTTC GATCCGCCGA TGGAACCGCC GTCGTGGACG TTTCCGATTC CGGTCCGGGC ATTGCCGCCG AGGATTTGGA GAAGATCTTC CTGCCGTTTC AACGGGTTCC CATGACCGCT CCCGGCACGG AGCGCGGAGC GGGGCTCGGG CTGAGCATTG CCCGCTCCAT CGCGACGGCG CACGGAGGGC GGATCCAGGT TCGAAGCTTT CCCGGGAAGG GAAGCACCTT CAGCGTGTAC ATTCCCATGA GTCCCGAAGC GCCCTCCTGA
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Protein sequence | MKSIRARLTL WYTSLLTVTL VLLGGTAYAL LSYSLSHEVD AALNGVARSL TERAHGPSAF VPAEVDEAFR RFFGFSPWNR YFQLFDPLGH RDPRQPAPHS GRLPLSGEAL NNAANGISTY ETVPGSEEHP VRVLTMPVME GGRMVNLVQV GMSLKSVLET RTRFLLIMAV LFPVGLVLAA TGGLLLARRA LRPVDRMAEA ARRISAEHLA ERIGGTGAGD ELDRLASTLN EMLGRLDTAF TQVRRFSADA SHELQTPLTI LKGELEVALR SPRTPEEYQA VLKSALEEID RIAHLVEGLL LLARAEAGVL RMDRRPVDLE QLAEEVYWRL KVLADSRSIR FDSELAEPVV VPGDRERLRR LLFNLVDNAI KYTRPGGVVR LSVRSADGTA VVDVSDSGPG IAAEDLEKIF LPFQRVPMTA PGTERGAGLG LSIARSIATA HGGRIQVRSF PGKGSTFSVY IPMSPEAPS
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