Gene Cagg_3142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3142 
Symbol 
ID7269891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3815917 
End bp3819975 
Gene Length4059 bp 
Protein Length1352 aa 
Translation table11 
GC content54% 
IMG OID643567963 
Productmulti-sensor hybrid histidine kinase 
Protein accessionYP_002464436 
Protein GI219850003 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCCGGT TGCACCAGCG CTATCTGTTC GGTTTCAGCC TTGTATATGC TGTACTCATC 
TGGCTAGACG TACAGCTTGC GTTGGTGCGC TCTGATACCC TATTAGTGTG GTTTGCTACC
GGGTTGTCAA TCGGTGGCGT ATTGGCCTTT GGGAACCGGG CGCTTTGGCC GATCCTCTTT
GGGGCACTCG TTGGATGTAG CGTCGTATGT TGGCAACTAG GCCTTGAGCC GTACCGCCTG
ATCACCGTGA CGATGCTGTT TGCCTTCAGC GCCGTAGGGC AGGCGTGGTT GGCCGGTTGG
TTAGTGCGCC GATTCGGTCG TTCACTGCCA CCGGCTTCGT TGCGCTGGGG GTTGCATACG
TGCGGATTGC TGGCGCTGGC TGTACTACCG GCACCGGTGT TATGGTTAAC GGTACTAACT
GCCCTAGATG TGGTGGTGGT ATCCGATCTG TGGATCGCTG CTCTCCAATG GTGGCTCAAT
CTCCTGACCA GCGTTTGGTT GGTCGCACCT TGGGTGGTTT TGGGTGTTAC CTATTGGCGA
CGAAAATCAA TACGCGAGCC GTGGCTGTGG CCGGTAAGTA GTCTGCTGCT AGCGTTGTTA
TTGTTTACCC TCCAGCTCGT TTGGCGCGAT GCACAGCAGC GCTACGCAAC AAAGGTGCAG
TCCGATGCAG CCGAAATTGT GAGCGTTATC GATGATCGTT TGCTCCGCTA CGAACAGGCG
ATGCAGAGCC TGAGTGCATT CTTTTATGCG TCACAGTCTG TAGAACAGCA CGAGTTTAGT
GCTTTTGGGC GCACGATCCT TGAACAATTA CCGGCGGTGC AGTCGGTGGG ATGGGTGCGT
CGGGTACGAC AGGCCGAGCG GTTAAACTTT GAGTATGCTC AGCAGGAGCG CGGGATACCC
GACTTTGTAA TTCGCGAACC GGGTGTTACA GGGCCACCAG CCGCAGTTCG CGATGAATAT
TACCCGCTGA CCTACGTCGA ACCGTTCGCG ACTCGTCGTG CATTGTTGGG GATGGATATG
GCTATGGAGC CATACCAACG CGATGCGTTG TACGAGGTGC GTGATAGTGG ACAAGTGGTG
ATGACAGGGC CGATTCAGCC CTATGCGACC GATGTCGAAT CACCGGCTGT GCTCTTGATC
ATGCCGGTTT ATACGTCTGG CCCACCTCCG CAAACCGTGG AGGAGCGACG GCAACGGATT
CAAGGTGTGG TCTTGATGCT CGTATCACCG GCAGAGCTGC TCAAACAGGC GCTACAACCT
ATCGCTGCCC CCGATTTCGA CATCCTTCTG ATTGATGCAA GTGCAGTGCC ACCTCGTCCC
CTCGCCTTTC ATTCGTTGGC GACAACGCAG GTTGATACAT TACCCGACCC GGTGAGCTAT
GTGCGTGAGG CAATCATCAT TCACGAACTA TCACGTTATG GGCGCGTATG GCAAGTTGCG
TTCCGTCCCG GACCGACCTA TCCACAGCGT TGGTTAAACG AGGATGCCAT ATGGCGTAGT
GTGTTGGCGG TAGGTAGTGT AGCGATCTTT TTTCTCTTCG TCGGTGTGCG CCAGCGTCAC
GAAGTTCGCC AGCGTCGGCT CACGCGGACC TACGCCCTGC TTAGTGCCAT CAACAAAATG
ATTATTCGCG AACGCGAACC ACTGCGTATC TTTCAGGCAG TCTGCCAAAT TGCGGTGAAA
CAGGGTGGTT TTCGGATGGC GTGGGTAGGG TTACGGAATA CGACGAATAA CCGTCTCGAA
CCGATTGCGG TTGCCGGTAA GGCAGATGAT TATCTTGCCC AACTCGATAT TGTGCTAACC
GAAGATAATC CCTGTCCTAC AGCGCAAGCG TTGCTCCGCA AGCAGGCGAT CATTGTCAAC
GATGTTGCTA ACGATCGGCG GGTAGCGATA TGGCGTGAGG CGGCGTTACG TTTAGGGTAT
CGCGCATCGG CGAGTTTTCC GATTTTGATT GATGGTGAAG TATATGCCAC GCTCAGTTTG
TATGCTGCTC AGCCGGGATT TTTTGATACA GCGGAAGTTC ATTTGCTGAA TGAACTGGTG
CAGGATATTG CGTTTGCTAT TGTCGTTAGG CGGCAAGAAG CTCAGCTACG GGCGAGTGAA
CAACGGAATC ACTTGATCGT CAGTACGTTA CCCGATATTG TATTTCGCCT CAACCGGGAA
GGACGGATTA TCGATGTTGC GGACGGCAAT ACGAACAGTT TGCTCAAACC ACCGGCAGAA
ATTCTGAACC AGACGTTAGA AGACTTGAGC GATGTGCTGA GTTCAGAGAT GATTAGCGAG
CTTCGCTTGG CATTGACAAC CGCTTTTGCC ACCGGCGAAC TACAAACGGT GGCGTATAAG
CTGCTTTTTT CAGGCCAAGA ACGATTCTTT GAGGCGCGGA TCAAAGCCAT CCCGACCGGT
GATGAAGCGA TTGTGCTGGT GCGCGACATT ACTGCCTGGC GGGTTGCCGA ATTGCAGTTG
CAAGCCGAGC GTGATTTGTT GGCGCAGCGT GTCGCGGAAC GTACTGCCGA ACTTAGTCGG
GCCAATGCTG AACTGGCCCG GTCGGTGCGG GTCAAAGATG AATTTCTCGC TAATATGAGC
CACGAGTTAC GCACGCCACT CAACACCATC CTTACCCTGA GTGAGAGCTT GCTGGAAGAA
CTGCGCGGTC CGCTCAACGA ACGGCAACGG GCATCAATCC AATTGATCGA AACGAGTGGT
CGTCATCTAT TAACGCTCAT CAACGATGTG CTCGATGTGG CAAAGATTGA GGCAGGACGG
ATGGAGCTGG TCAAAGAGGT GGTTGCGGTC AGTGATGTGT GTGAGTCCAG TTTGGTTTTA
ATTAAAGAAC AAGCGGCCAA GAAACAGATT CGGCTGCATT GTGTCATCGA TGCTCCGCAT
ACCCGTTTCC TCGCCGATCC GCGTCGTTTG AAGCAGATAT TGGTCAATCT GTTGAGTAAC
GCCGTTAAGT TCACACCGGA AGGTGGTTCG GTCGAGTTGC GGGTGACTAC CGATACGGCG
CAAGGAACGA TTGCGTTTGC AGTCAGTGAT ACAGGAATTG GGATTGCACC TGACCAGTTG
CCACGACTAT TTCAGCCGTT TGTGCAGCTT GACAGCAGTC TCACCCGAGA ACACGAAGGG
TCGGGCTTGG GGTTGGCGTT AGTGAGGCGG CTGGTTGATC TTCACGGCGG TAGTGTGAGT
GTTACCAGCA CGCCGGGATC TGGTAGCGTA TTTACCGTCA CGTTACCGTA CCAACCACTC
CAGTATGCGG TACCTAATCC TGCGGCAAAT GATCCATTAC CGCCGGTGCG ATCGGCACTG
ATTATTGAAA GTTCAGCCGT CGTTGCCGAA CAACTAGCCC GCTACCTCGC CGAGCAAAAC
ATTCAGCCGG TGGTGTGGCT GTACGGTAAC GGTGCGGTTG AGCAAGTGGC AGCCATGCGT
CCTGATTTAA TCGTGCTCAG TGTCGAGATA CCAGATCGCT CCGGCTGGGA GATTCTCGCC
GATCTGCAAC GTGATCCAGA GCTACGCCGT ATTCCCGTGA TCGTTGTCTC GGTAGTTGAT
GAACCGGAAC GAGGTTTTAC GGCAGGCGCT GCGGCGTATC TCGTCAAACC GATCAATCGG
GCGATGCTAC AGCAAGCATT GAGCCAAATC TCGTTTTCGG CTGTCTTACC CGCTGAGCCG
GTAGTAGGAA AAGGTAGCAG TGCGCGCGTG TTGGTAGCTG AAGACAATGA GATGAATCTC
ATGGTTTTGA GTGAATATCT GCAAGCTTAT GGTTACGAGG TGTGTGTGGC GCGGAACGGA
CGTGAAGCGT TACAGGTGGC AGCGGAGTGG CGACCGGATC TCATCATTAT GGATATCCAG
ATGCCCGAAC TTGATGGTTT AGAGGCCATC CGTCAGTTAC GGGCGCAGGC GGCGTATGCG
ACCACGCCGA TCATTGCGGT AACGGCACTG GCGATGCCGG GTGATCGTGA ACAGTGTTTG
CTGGCCGGTG CCACTGACTA CCTCACCAAG CCGATTAGTT TACGTCGGTT GGCTCGACAC
ATCGAACGAT TGCTGACTCA CTCGCAACAT GCCAGATAA
 
Protein sequence
MGRLHQRYLF GFSLVYAVLI WLDVQLALVR SDTLLVWFAT GLSIGGVLAF GNRALWPILF 
GALVGCSVVC WQLGLEPYRL ITVTMLFAFS AVGQAWLAGW LVRRFGRSLP PASLRWGLHT
CGLLALAVLP APVLWLTVLT ALDVVVVSDL WIAALQWWLN LLTSVWLVAP WVVLGVTYWR
RKSIREPWLW PVSSLLLALL LFTLQLVWRD AQQRYATKVQ SDAAEIVSVI DDRLLRYEQA
MQSLSAFFYA SQSVEQHEFS AFGRTILEQL PAVQSVGWVR RVRQAERLNF EYAQQERGIP
DFVIREPGVT GPPAAVRDEY YPLTYVEPFA TRRALLGMDM AMEPYQRDAL YEVRDSGQVV
MTGPIQPYAT DVESPAVLLI MPVYTSGPPP QTVEERRQRI QGVVLMLVSP AELLKQALQP
IAAPDFDILL IDASAVPPRP LAFHSLATTQ VDTLPDPVSY VREAIIIHEL SRYGRVWQVA
FRPGPTYPQR WLNEDAIWRS VLAVGSVAIF FLFVGVRQRH EVRQRRLTRT YALLSAINKM
IIREREPLRI FQAVCQIAVK QGGFRMAWVG LRNTTNNRLE PIAVAGKADD YLAQLDIVLT
EDNPCPTAQA LLRKQAIIVN DVANDRRVAI WREAALRLGY RASASFPILI DGEVYATLSL
YAAQPGFFDT AEVHLLNELV QDIAFAIVVR RQEAQLRASE QRNHLIVSTL PDIVFRLNRE
GRIIDVADGN TNSLLKPPAE ILNQTLEDLS DVLSSEMISE LRLALTTAFA TGELQTVAYK
LLFSGQERFF EARIKAIPTG DEAIVLVRDI TAWRVAELQL QAERDLLAQR VAERTAELSR
ANAELARSVR VKDEFLANMS HELRTPLNTI LTLSESLLEE LRGPLNERQR ASIQLIETSG
RHLLTLINDV LDVAKIEAGR MELVKEVVAV SDVCESSLVL IKEQAAKKQI RLHCVIDAPH
TRFLADPRRL KQILVNLLSN AVKFTPEGGS VELRVTTDTA QGTIAFAVSD TGIGIAPDQL
PRLFQPFVQL DSSLTREHEG SGLGLALVRR LVDLHGGSVS VTSTPGSGSV FTVTLPYQPL
QYAVPNPAAN DPLPPVRSAL IIESSAVVAE QLARYLAEQN IQPVVWLYGN GAVEQVAAMR
PDLIVLSVEI PDRSGWEILA DLQRDPELRR IPVIVVSVVD EPERGFTAGA AAYLVKPINR
AMLQQALSQI SFSAVLPAEP VVGKGSSARV LVAEDNEMNL MVLSEYLQAY GYEVCVARNG
REALQVAAEW RPDLIIMDIQ MPELDGLEAI RQLRAQAAYA TTPIIAVTAL AMPGDREQCL
LAGATDYLTK PISLRRLARH IERLLTHSQH AR