Gene Phep_2551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2551 
Symbol 
ID8253658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2968283 
End bp2969479 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content44% 
IMG OID644936201 
ProductATP-binding region ATPase domain protein 
Protein accessionYP_003092817 
Protein GI255532445 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTACGC ATACAGCTCA GGATCTGGTT TCGGTTGAAG ACGAAAGGAT TAAAACACTG 
TACAATTACG ATCTGCTGGA TACGCCTCCG GAGGTACCAT TTGATAAATT GACCCGACTG
GCGGCAAACC TGCTTAAAGT ACCCATAGCC ATTATATTAC TGGTAGACAA AGAGAGAATT
TGGTTTAAAT CAAAGTATGG TCTGGAAACC CGGCAAATAG ACCGTGAAGA GGGCTTGTGT
GATTCTGCTG TATTGGCGGA GGATCTTTAT CTGGTCGAAA ATGCAGCTGC TGACCCAAGG
ACTATGGGGC ACCGCCTGGT AACGGGGACT TTTGGATTAA GGTTCTATGC GGCCTACCCA
CTTAAAACCA GGGACGGCTA TAACCTTGGG GCTTTCTGTG TGATCAGTAA AGAACCCAGA
AAAATGAGCA GGGAGGATTC GGAAATTTTA AGGGACATCA GGGACATTGT GATGCACAAT
ATTGAGCTCA GGTTAACTTC TAAGCTATCG GCTGCAAGAC AGCAACAAAT ATTAAATACA
ACGGCACACG ATCTTAAAAA TCCCTTAACC ACCATTCCGG TTCGTGCAGA TCTGATCAAA
ATGAAGAAAA ATAATCCGGA GATGGTAGAT ACCATGTGCG ATCAGATTAA AGTTGCAAGT
TTAAATATGG TCCGCATCAT AGATGAACTG TTGCAATCGG GCAGTATGGA ATCCGATCAG
GTCCATTTGC TGATGATGAA ACTCAATGTT TCCTTTCTGG TCAGTAATGT AGTATCCATG
AACCTGCCTT TGGCAGAAAG AAAAGGCCAG ACCATACATT TCAGTTCGGA GATGGATGTA
ATGGCGACTG GTGATGAGGG GAAACTGAAC GAAGTGATAG ATAACCTGGT CAACAATGCC
ATCAAGTATT CACCACTCAA TACCAACATT TATGTCCGTG TAAAAACATT CCCCAATCAT
GTACTGATAG AAGTTGAAGA TGAGGGGCAG GGCTTAACTG CTGAAGATAA AAAACAATTG
TTCCAGCGTT TTACCCGATT AAGTGCGAGA CCTACAGCCG GTGAGCATTC TACCGGTCTT
GGACTTTCTA TCGTTAAAAC CCTGGTTGAA GCCCATGGCG GCCGGATCTT TGCCGAAAGT
GCAGGAAAGG GTTCAGGTGC TAAATTTAGC GTTGAACTCC CTTTGCGCAC AAATTAA
 
Protein sequence
MVTHTAQDLV SVEDERIKTL YNYDLLDTPP EVPFDKLTRL AANLLKVPIA IILLVDKERI 
WFKSKYGLET RQIDREEGLC DSAVLAEDLY LVENAAADPR TMGHRLVTGT FGLRFYAAYP
LKTRDGYNLG AFCVISKEPR KMSREDSEIL RDIRDIVMHN IELRLTSKLS AARQQQILNT
TAHDLKNPLT TIPVRADLIK MKKNNPEMVD TMCDQIKVAS LNMVRIIDEL LQSGSMESDQ
VHLLMMKLNV SFLVSNVVSM NLPLAERKGQ TIHFSSEMDV MATGDEGKLN EVIDNLVNNA
IKYSPLNTNI YVRVKTFPNH VLIEVEDEGQ GLTAEDKKQL FQRFTRLSAR PTAGEHSTGL
GLSIVKTLVE AHGGRIFAES AGKGSGAKFS VELPLRTN