More than 300 homologs were found in PanDaTox collection
for query gene Oter_3856 on replicon NC_010571
Organism: Opitutus terrae PB90-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010571  Oter_3856  response regulator receiver sensor signal transduction histidine kinase  100 
 
 
378 aa  769    Opitutus terrae PB90-1  Bacteria  normal  normal  0.215089 
 
 
-
 
NC_011769  DvMF_1131  response regulator receiver sensor signal transduction histidine kinase  41.64 
 
 
500 aa  263  3e-69  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008751  Dvul_0579  response regulator receiver sensor signal transduction histidine kinase  39.67 
 
 
487 aa  244  1.9999999999999999e-63  Desulfovibrio vulgaris DP4  Bacteria  normal  0.721447  normal 
 
 
-
 
NC_014248  Aazo_4229  response regulator receiver sensor signal transduction histidine kinase  35.77 
 
 
383 aa  215  9.999999999999999e-55  'Nostoc azollae' 0708  Bacteria  normal  0.599633  n/a   
 
 
-
 
NC_010571  Oter_0959  response regulator receiver sensor signal transduction histidine kinase  35.48 
 
 
372 aa  207  2e-52  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_3271  PAS/PAC sensor hybrid histidine kinase  33.75 
 
 
1691 aa  207  2e-52  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_0809  response regulator receiver sensor signal transduction histidine kinase  36.74 
 
 
367 aa  201  1.9999999999999998e-50  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_013216  Dtox_3783  histidine kinase  31.17 
 
 
544 aa  189  7e-47  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.401083  normal 
 
 
-
 
NC_008340  Mlg_1802  GAF sensor signal transduction histidine kinase  40.98 
 
 
456 aa  179  8e-44  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_009012  Cthe_1826  response regulator receiver sensor signal transduction histidine kinase  32.51 
 
 
363 aa  177  4e-43  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0975  response regulator receiver sensor signal transduction histidine kinase  33.06 
 
 
383 aa  174  2.9999999999999996e-42  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011726  PCC8801_2743  response regulator receiver sensor signal transduction histidine kinase  30.69 
 
 
395 aa  174  2.9999999999999996e-42  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_3359  response regulator receiver sensor signal transduction histidine kinase  30.69 
 
 
395 aa  174  2.9999999999999996e-42  Cyanothece sp. PCC 8802  Bacteria  normal  0.361398  normal 
 
 
-
 
NC_013440  Hoch_3251  response regulator receiver sensor signal transduction histidine kinase  30.14 
 
 
418 aa  173  5e-42  Haliangium ochraceum DSM 14365  Bacteria  normal  0.35487  normal  0.0265543 
 
 
-
 
NC_013440  Hoch_2175  response regulator receiver sensor signal transduction histidine kinase  33.69 
 
 
395 aa  172  5.999999999999999e-42  Haliangium ochraceum DSM 14365  Bacteria  normal  0.924768  normal  0.400775 
 
 
-
 
NC_011146  Gbem_3274  response regulator receiver sensor signal transduction histidine kinase  32.71 
 
 
383 aa  172  6.999999999999999e-42  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_2262  response regulator receiver sensor signal transduction histidine kinase  31.96 
 
 
406 aa  171  2e-41  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.146487 
 
 
-
 
NC_011831  Cagg_0838  GAF sensor signal transduction histidine kinase  45.26 
 
 
461 aa  171  2e-41  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_010551  BamMC406_1236  response regulator receiver sensor signal transduction histidine kinase  31.06 
 
 
386 aa  169  6e-41  Burkholderia ambifaria MC40-6  Bacteria  normal  0.493129  normal 
 
 
-
 
NC_010623  Bphy_4530  response regulator receiver sensor signal transduction histidine kinase  30.79 
 
 
386 aa  168  1e-40  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_4555  response regulator receiver sensor signal transduction histidine kinase  32.62 
 
 
406 aa  168  1e-40  Cyanothece sp. PCC 7425  Bacteria  normal  0.330139  normal  0.677797 
 
 
-
 
NC_007519  Dde_1941  response regulator receiver sensor signal transduction histidine kinase  32.23 
 
 
395 aa  167  2e-40  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.0596409  n/a   
 
 
-
 
NC_011729  PCC7424_2188  response regulator receiver sensor signal transduction histidine kinase  31.19 
 
 
384 aa  167  2e-40  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.00677544 
 
 
-
 
NC_013061  Phep_4249  ATP-binding region ATPase domain protein  33.16 
 
 
374 aa  167  2e-40  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_2393  response regulator receiver sensor hybrid histidine kinase  35.05 
 
 
518 aa  167  2e-40  Magnetococcus sp. MC-1  Bacteria  normal  0.991201  normal  0.0787545 
 
 
-
 
NC_011729  PCC7424_0500  response regulator receiver sensor signal transduction histidine kinase  30.38 
 
 
373 aa  166  5e-40  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_010322  PputGB1_2145  response regulator receiver sensor signal transduction histidine kinase  31.22 
 
 
408 aa  166  6.9999999999999995e-40  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.001377 
 
 
-
 
NC_007413  Ava_1562  response regulator receiver Signal transduction histidine kinase  29.54 
 
 
369 aa  166  8e-40  Anabaena variabilis ATCC 29413  Bacteria  normal  0.847548  normal  0.236297 
 
 
-
 
NC_011884  Cyan7425_4611  response regulator receiver sensor signal transduction histidine kinase  31.87 
 
 
1002 aa  166  8e-40  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.367657 
 
 
-
 
NC_008609  Ppro_2968  response regulator receiver sensor signal transduction histidine kinase  26.55 
 
 
392 aa  166  8e-40  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009507  Swit_5356  response regulator receiver sensor signal transduction histidine kinase  31.56 
 
 
377 aa  165  1.0000000000000001e-39  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.940445 
 
 
-
 
NC_011984  Avi_9098  bacteriophytochrome protein  32.53 
 
 
378 aa  164  2.0000000000000002e-39  Agrobacterium vitis S4  Bacteria  normal  0.384054  n/a   
 
 
-
 
NC_009972  Haur_0593  response regulator receiver sensor signal transduction histidine kinase  27.5 
 
 
397 aa  165  2.0000000000000002e-39  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.177467  n/a   
 
 
-
 
NC_011884  Cyan7425_2570  response regulator receiver sensor signal transduction histidine kinase  31.02 
 
 
381 aa  164  2.0000000000000002e-39  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_3693  histidine kinase  30.41 
 
 
667 aa  164  2.0000000000000002e-39  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B4539  response regulator receiver:ATP-binding region, ATPase-like:histidine kinase A, N-terminal  30 
 
 
1152 aa  163  4.0000000000000004e-39  Ralstonia eutropha JMP134  Bacteria  normal  0.329946  n/a   
 
 
-
 
NC_007947  Mfla_2590  response regulator receiver sensor signal transduction histidine kinase  30.33 
 
 
405 aa  163  4.0000000000000004e-39  Methylobacillus flagellatus KT  Bacteria  normal  normal  0.413696 
 
 
-
 
NC_007492  Pfl01_2649  response regulator receiver Signal transduction histidine kinase  29.95 
 
 
404 aa  163  6e-39  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.699737 
 
 
-
 
NC_008781  Pnap_1070  response regulator receiver sensor signal transduction histidine kinase  32 
 
 
402 aa  163  6e-39  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.947697  normal  0.86399 
 
 
-
 
NC_009012  Cthe_0286  response regulator receiver sensor signal transduction histidine kinase  28.65 
 
 
424 aa  162  1e-38  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.136894  n/a   
 
 
-
 
NC_008312  Tery_0615  response regulator receiver sensor signal transduction histidine kinase  32.56 
 
 
395 aa  161  2e-38  Trichodesmium erythraeum IMS101  Bacteria  normal  hitchhiker  0.00858549 
 
 
-
 
NC_007413  Ava_3616  response regulator receiver Signal transduction histidine kinase  30.3 
 
 
393 aa  158  1e-37  Anabaena variabilis ATCC 29413  Bacteria  normal  0.159723  normal  0.789101 
 
 
-
 
NC_011726  PCC8801_1483  response regulator receiver sensor signal transduction histidine kinase  29.48 
 
 
374 aa  159  1e-37  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_1510  response regulator receiver sensor signal transduction histidine kinase  29.48 
 
 
374 aa  159  1e-37  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_2005  response regulator receiver sensor signal transduction histidine kinase  30.38 
 
 
408 aa  157  2e-37  Pseudomonas putida F1  Bacteria  normal  normal  0.343751 
 
 
-
 
NC_002947  PP_3758  response regulator receiver sensor signal transduction histidine kinase  30.38 
 
 
408 aa  157  3e-37  Pseudomonas putida KT2440  Bacteria  normal  normal  0.734482 
 
 
-
 
NC_013501  Rmar_1190  histidine kinase  35.16 
 
 
646 aa  157  4e-37  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_2802  response regulator receiver sensor signal transduction histidine kinase  31.23 
 
 
406 aa  156  5.0000000000000005e-37  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_0932  response regulator receiver sensor signal transduction histidine kinase  28.49 
 
 
374 aa  155  1e-36  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_0735  PAS/PAC sensor signal transduction histidine kinase  41.2 
 
 
841 aa  155  1e-36  Delftia acidovorans SPH-1  Bacteria  normal  0.310558  normal 
 
 
-
 
NC_013440  Hoch_6548  response regulator receiver sensor signal transduction histidine kinase  31.6 
 
 
397 aa  155  2e-36  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.543575 
 
 
-
 
NC_013440  Hoch_6238  histidine kinase  31.35 
 
 
519 aa  154  2e-36  Haliangium ochraceum DSM 14365  Bacteria  normal  0.547868  normal 
 
 
-
 
NC_011884  Cyan7425_3767  response regulator receiver sensor hybrid histidine kinase  29.47 
 
 
587 aa  155  2e-36  Cyanothece sp. PCC 7425  Bacteria  normal  0.634012  normal 
 
 
-
 
NC_011729  PCC7424_0037  response regulator receiver sensor signal transduction histidine kinase  31.11 
 
 
387 aa  154  2e-36  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_007948  Bpro_3898  multi-sensor signal transduction histidine kinase  29.97 
 
 
1003 aa  153  4e-36  Polaromonas sp. JS666  Bacteria  normal  0.504038  normal  0.0804481 
 
 
-
 
NC_007348  Reut_B4602  response regulator receiver:ATP-binding region, ATPase-like:histidine kinase A, N-terminal  31.19 
 
 
396 aa  153  5e-36  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_1114  response regulator receiver sensor signal transduction histidine kinase  29.44 
 
 
373 aa  153  5e-36  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011831  Cagg_2626  response regulator receiver sensor signal transduction histidine kinase  29.12 
 
 
392 aa  153  5e-36  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_008751  Dvul_2282  histidine kinase  29.43 
 
 
667 aa  153  5e-36  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_007796  Mhun_2640  histidine kinase  35.12 
 
 
397 aa  152  7e-36  Methanospirillum hungatei JF-1  Archaea  normal  0.976353  normal 
 
 
-
 
NC_010571  Oter_0263  integral membrane sensor signal transduction histidine kinase  39.38 
 
 
501 aa  152  7e-36  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_2109  response regulator receiver sensor signal transduction histidine kinase  29.62 
 
 
408 aa  152  1e-35  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_0047  histidine kinase  35.32 
 
 
508 aa  151  2e-35  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_011729  PCC7424_1421  response regulator receiver sensor signal transduction histidine kinase  28.57 
 
 
404 aa  150  2e-35  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_004578  PSPTO_2715  sensor histidine kinase/response regulator  29.11 
 
 
393 aa  150  3e-35  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.615592  n/a   
 
 
-
 
NC_009439  Pmen_0172  response regulator receiver sensor signal transduction histidine kinase  30.53 
 
 
395 aa  150  3e-35  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_3142  multi-sensor hybrid histidine kinase  34.36 
 
 
1352 aa  150  3e-35  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_2149  response regulator receiver Signal transduction histidine kinase  29.98 
 
 
407 aa  150  5e-35  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.142048 
 
 
-
 
NC_007005  Psyr_2448  response regulator receiver:ATP-binding region, ATPase-like:histidine kinase A, N-terminal  29.29 
 
 
393 aa  148  1.0000000000000001e-34  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.760608  hitchhiker  0.00120668 
 
 
-
 
NC_011884  Cyan7425_4608  multi-sensor signal transduction histidine kinase  32.55 
 
 
1645 aa  149  1.0000000000000001e-34  Cyanothece sp. PCC 7425  Bacteria  normal  0.284957  normal  0.407853 
 
 
-
 
NC_013525  Tter_1031  histidine kinase  34.36 
 
 
617 aa  148  2.0000000000000003e-34  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011662  Tmz1t_1845  multi-sensor hybrid histidine kinase  36.16 
 
 
878 aa  148  2.0000000000000003e-34  Thauera sp. MZ1T  Bacteria  normal  0.187428  n/a   
 
 
-
 
NC_010002  Daci_1871  PAS/PAC sensor signal transduction histidine kinase  39.91 
 
 
842 aa  147  4.0000000000000006e-34  Delftia acidovorans SPH-1  Bacteria  normal  0.464371  normal 
 
 
-
 
NC_009767  Rcas_3600  histidine kinase  34.47 
 
 
548 aa  147  4.0000000000000006e-34  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.94225  normal 
 
 
-
 
NC_007413  Ava_3976  response regulator receiver Signal transduction histidine kinase  33.49 
 
 
431 aa  146  5e-34  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0119459  decreased coverage  0.00202838 
 
 
-
 
NC_013440  Hoch_2075  response regulator receiver sensor hybrid histidine kinase  30.75 
 
 
572 aa  146  5e-34  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_0711  response regulator receiver sensor signal transduction histidine kinase  36.8 
 
 
581 aa  146  7.0000000000000006e-34  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_013161  Cyan8802_1522  response regulator receiver sensor signal transduction histidine kinase  30.97 
 
 
389 aa  145  8.000000000000001e-34  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_1561  response regulator receiver Signal transduction histidine kinase  29.47 
 
 
443 aa  145  9e-34  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.414952 
 
 
-
 
NC_011726  PCC8801_1495  response regulator receiver sensor signal transduction histidine kinase  30.97 
 
 
389 aa  145  9e-34  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_002939  GSU0149  sensor histidine kinase/response regulator  30.54 
 
 
371 aa  145  1e-33  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_5276  response regulator receiver sensor signal transduction histidine kinase  36.8 
 
 
579 aa  145  1e-33  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.606728  n/a   
 
 
-
 
NC_011729  PCC7424_1422  response regulator receiver sensor signal transduction histidine kinase  31.34 
 
 
361 aa  145  1e-33  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_009767  Rcas_1646  response regulator receiver sensor signal transduction histidine kinase  29.41 
 
 
391 aa  144  2e-33  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.930467  normal  0.0178265 
 
 
-
 
NC_011769  DvMF_0064  histidine kinase  28.43 
 
 
598 aa  144  2e-33  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_0065  histidine kinase  26.49 
 
 
578 aa  144  3e-33  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_5514  multi-sensor signal transduction histidine kinase  35.77 
 
 
1010 aa  143  4e-33  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_4564  response regulator receiver sensor signal transduction histidine kinase  30.73 
 
 
376 aa  143  5e-33  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.531352 
 
 
-
 
NC_008530  LGAS_0065  Signal transduction histidine kinase  30.28 
 
 
621 aa  143  5e-33  Lactobacillus gasseri ATCC 33323  Bacteria  normal  normal 
 
 
-
 
NC_007964  Nham_3684  response regulator receiver sensor signal transduction histidine kinase  35.6 
 
 
580 aa  143  6e-33  Nitrobacter hamburgensis X14  Bacteria  normal  0.896547  n/a   
 
 
-
 
NC_007925  RPC_0095  response regulator receiver sensor signal transduction histidine kinase  35.04 
 
 
582 aa  142  8e-33  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_2687  response regulator receiver sensor signal transduction histidine kinase  27.18 
 
 
1013 aa  142  9e-33  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.70216  normal 
 
 
-
 
NC_010623  Bphy_4207  response regulator receiver sensor signal transduction histidine kinase  32.45 
 
 
370 aa  142  9.999999999999999e-33  Burkholderia phymatum STM815  Bacteria  normal  normal  0.728065 
 
 
-
 
NC_007519  Dde_1522  histidine kinase  27.37 
 
 
544 aa  141  9.999999999999999e-33  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1662  response regulator receiver sensor signal transduction histidine kinase  27.68 
 
 
396 aa  142  9.999999999999999e-33  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008553  Mthe_0065  PAS/PAC sensor signal transduction histidine kinase  32.28 
 
 
377 aa  142  9.999999999999999e-33  Methanosaeta thermophila PT  Archaea  normal  n/a   
 
 
-
 
NC_009635  Maeo_1437  integral membrane sensor signal transduction histidine kinase  31.2 
 
 
640 aa  142  9.999999999999999e-33  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_010676  Bphyt_5387  response regulator receiver sensor signal transduction histidine kinase  29.81 
 
 
375 aa  142  9.999999999999999e-33  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.0971839 
 
 
-
 
NC_012918  GM21_2551  response regulator receiver sensor signal transduction histidine kinase  27.68 
 
 
396 aa  141  1.9999999999999998e-32  Geobacter sp. M21  Bacteria  n/a    hitchhiker  1.14529e-19 
 
 
-
 
NC_008752  Aave_2974  histidine kinase  35.32 
 
 
298 aa  141  1.9999999999999998e-32  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.355012 
 
 
-
 
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