Gene Cagg_0838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0838 
Symbol 
ID7268290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1041692 
End bp1043077 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content54% 
IMG OID643565687 
ProductGAF sensor signal transduction histidine kinase 
Protein accessionYP_002462196 
Protein GI219847763 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCCCT ACAACTCACC TACAGCCGAC GAAATCGAAC GGCTCGTCGA AATTGCCGAA 
CACTTACGCG ACGGCGACTT CACTGTTGAT GTACCGGTTC TACGTAACAA CGACGAACGT
CTCGCCCGAT TAGCGGCGTC ACTTCGTGAA CTGGCCAAAA CCCTCGCCCG TCGTCAGCGT
GAGCTTGAAA TGCTCCACCG TATCACCAGC CGGATCAACG CCGGTCTTAT GCTCGACGAA
ATTCTCGATG GGGTCTACAA CGACTTTCGC GATGTCATCC CCTATGAGCG GATCGGTTGT
GCGTTGCTTG AAGAGGGCGG CAAGGTGGTA CGCGCACGCT GGGCACGTAC CAGCCTACCT
ACCGTTCACC TCAAACGAGG CTATGCAGCG GCAATGGCCG GCAGCAGCCT GGAAAAGATT
ATACAGACCG GACAACCGCG GATTATTAAC GATCTCGTAC AGTACCTGCG CCAAAAGCCC
GAATCAGAAT CAACGCGCCT GATAGTGAAC GAAGGGATTC GCTCATCACT TACCTGTCCG
TTAATCGCCA ATGGGGTGCC AATCGGGTTT ATCTTCTTTT CGAGTACCCA AACCAACACG
TACACGAACG AACATATCGA GCGCTACATG CAGATCGCCG AACAGTTATC GGTGATCGTC
GAAAAAGGTA ACCTTGTCTC GCAACTAGCT GCGCAGAAAG AACTCCTTGA ACAGCAGAAT
GCAGAACTAC GACGGCTTTC AGCATTGAAA AACAACCTGT TCGGCATGGT CGCACACGAT
CTGCGCAACC CGGTAGCGAT CATCCAAATG ATGACGGCTA TTCTCCGCAA CCCGAACTTG
CCACGGTCAC CAGAAGAGCG CCAGCGGCTC CTTGACGACA TTTACCGACA GACCGAACAC
ATGTTGCTCT TGCTCAACGA TCTCCTCGAC CTAAGCCAGA TCGAAAACGG GACCGTCACT
ATATCCCCTG AACCGGTGCC CGTTGAGCCA CTACTCGAAG AAACGGTCAA CCGGCATCAA
ATGCTCGCCG CCCCCAAACA CACCCGGATC GAACTAACAG GTGATCGCCA TGGAAAGGTG
TATGCCGATC CGCTCCGCGT CCGGCAAGTA TTCGATAACC TGATCTCGAA TGCCGTCAAG
TTTTCGCCAC CCGGTAGCGT TATTACCATC AGCGCCGAGC GAGACGGCGA CTGGTGGAAG
TTTTCCGTCA CCGATCAAGG TCCGGGCATT AGTCCAGAAG AGCGGAGTCG TATGTTTGAA
GCATTTAGCC GGCTATCAGC TCGGCCGACC GGCGGCGAAA AGAGCACCGG TCTGGGGTTA
GCTATTGCGC GTAAAGTCGT CTTGGCTCAC GGTGGTGTCA TTGATGTCTC TTCTACACCG
GGCTAG
 
Protein sequence
MDPYNSPTAD EIERLVEIAE HLRDGDFTVD VPVLRNNDER LARLAASLRE LAKTLARRQR 
ELEMLHRITS RINAGLMLDE ILDGVYNDFR DVIPYERIGC ALLEEGGKVV RARWARTSLP
TVHLKRGYAA AMAGSSLEKI IQTGQPRIIN DLVQYLRQKP ESESTRLIVN EGIRSSLTCP
LIANGVPIGF IFFSSTQTNT YTNEHIERYM QIAEQLSVIV EKGNLVSQLA AQKELLEQQN
AELRRLSALK NNLFGMVAHD LRNPVAIIQM MTAILRNPNL PRSPEERQRL LDDIYRQTEH
MLLLLNDLLD LSQIENGTVT ISPEPVPVEP LLEETVNRHQ MLAAPKHTRI ELTGDRHGKV
YADPLRVRQV FDNLISNAVK FSPPGSVITI SAERDGDWWK FSVTDQGPGI SPEERSRMFE
AFSRLSARPT GGEKSTGLGL AIARKVVLAH GGVIDVSSTP G