Gene Ppro_0420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_0420 
Symbol 
ID4572999 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand
Start bp440204 
End bp441580 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content56% 
IMG OID639754460 
ProductGAF sensor signal transduction histidine kinase 
Protein accessionYP_900112 
Protein GI118578862 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00956949 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAACC AGAACAACAC CCCCCACTGC GACACCACGG ACAAGAAACT CAACGAGCTG 
GCACTGTTGT ACCAGCTCAG CAACACCTTG TTATCAACCA TCCGCCTCAA CAAACTCATC
CACCTGATCC TTACCGCTCT GACATCCGGC CCATCTCCGC TCTTCCAGCG AGCCATGCTC
TTCCTGCACA ACGAAAAGTC CCGTACGTTG CAGGGGATGC TCGGCGTCAC CAGCGACACC
TCCGAAAGAC TGGTTGTCGA GGGCGACGAA GAAAACCGGC TCAGCAACCG CTGGGACATC
AGCGATCAGG TCATCGCCCA CCAACGTGCA ACGAACTTTT GCAACCAGGT ACGGTCAACC
CGCATCGATA TCGACGGAAG CTGTCAAGTC ATCAGCAAGG TCATGGTGGA AAACGTCGTA
TACCATGCCG AGCAACCGGA GAGCGACGCC TGCCCGGCAT GCCTTGCCCT CAGGGAGTTG
GGCGTGTACG CCTTTGCCGC CGTCCCCCTG ATGGCGCGGG ACAAAAACCT GGGCATGATC
GCAGTGGACA ACCCCGGATC CGGCGCCAAG ATCACCCTGG ATGACCTGCA CTTCCTGCAA
CTCTTCGCAA ATCAGGCCGG CATGGCCGTG GAAAACTCCA TGCTCTACAA TCGTGTCGAA
GAGGCCCACT CCAACCTGCG TGACGCCCGT GAACGCCTGA TACGCGGCGA GCGCCTGGCT
GCAGTGGGAG AGATGGCGGC AAAACTGGCC CATGAGCTGA AGAATCCGCT CATAACCATT
GGAGGATTCT CCTGGCGCCT GATCAAGAAC CTGGCAACGG AATCGCCCGA ATACCGCTAC
GCCGATATCA TCAGCAAAGA GGTCTGTCGC CTGGAGAGGA TGTTAACCGA CATCCTCAGC
TTTACCAGCA AACCGATGGT CTGCTTCGAC TACGGCAACT GCGATCTGGA GGAGATTCTT
GGCGAGTGTT TCGAAGTCAG CAGCACCCCC CTGGAAGAGA ATAACGTAAG CCTGACGACC
TCGTTCAGCG GCGGCCCTTG GATCGTCCTG GGAGACGCCC ACCAACTCAA GCAGGTCTTC
CTCAACCTGA TTCTGAATGC CTGTGAATGC ATGACGGACG GAGGAGCGCT GGAGATCGGG
CTACAGAAAG TATTTCTTGA CAAAAATTCA GTAATGATTA GCATTAGCGA CACTGGCGGC
GGCATCCATC CCGACATGCT GCCCCGGATT TTCGATCCGT TCTTTACCAC CAAACCCCAA
GGAAGCGGGC TCGGACTGGC CATTGTCAAG CGCATCATGC TGAACCACAA CGGCTCCATT
GACGTGGAAA ACGGAGAACG AGGAGCGGTT TTCACGTTAA CACTGCCGCT CATATAG
 
Protein sequence
MENQNNTPHC DTTDKKLNEL ALLYQLSNTL LSTIRLNKLI HLILTALTSG PSPLFQRAML 
FLHNEKSRTL QGMLGVTSDT SERLVVEGDE ENRLSNRWDI SDQVIAHQRA TNFCNQVRST
RIDIDGSCQV ISKVMVENVV YHAEQPESDA CPACLALREL GVYAFAAVPL MARDKNLGMI
AVDNPGSGAK ITLDDLHFLQ LFANQAGMAV ENSMLYNRVE EAHSNLRDAR ERLIRGERLA
AVGEMAAKLA HELKNPLITI GGFSWRLIKN LATESPEYRY ADIISKEVCR LERMLTDILS
FTSKPMVCFD YGNCDLEEIL GECFEVSSTP LEENNVSLTT SFSGGPWIVL GDAHQLKQVF
LNLILNACEC MTDGGALEIG LQKVFLDKNS VMISISDTGG GIHPDMLPRI FDPFFTTKPQ
GSGLGLAIVK RIMLNHNGSI DVENGERGAV FTLTLPLI