Gene Ddes_0768 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_0768 
Symbol 
ID7284442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp899903 
End bp901924 
Gene Length2022 bp 
Protein Length673 aa 
Translation table11 
GC content62% 
IMG OID643581564 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_002479354 
Protein GI220904042 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.670648 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGCA GAGTCTCAAG ACTGTTTTCC GCCAGGGGCC TGCGCGCCCT GCATCTAGGC 
CTTTCACCCT GGATGGTGGT CGGCATGGCC ATCATTCTCG GCCTTGCCAT CACCGCGCTT
GCGGTGCGCA GCAATCAGCG CGGCAAGACA TATATGATAC AGAATCTCAT AGACAGGGCC
GAAGCCCTCA TCTGGGCCTT GGAAGCCGGC GCGCGCACAG GGCTGTGCAC GCCTCTGGGC
ACGTTGGGTA CAACTGACGG CCTTCAATCC TTGCTGACGG AAACCGCCAA GCAGCCCGGC
ATTGTTTTTA TGGCTGTAGC CAGTGATGAA GGTAAAATGC TTGCCTACAG CGTGCCTGTG
CGCAACAGGG ACAGAAGCCG GCCAGAGCGC GAAAACGCAT CTCCGCGAGA AATGACGGGC
GTGCAGCCCG GTGAGCGGGC ACTGGCCCTC ATCATGCCCA CCGGGGTGCA GGTAACAGAA
AAGCCCGCCT GGCGCATACG GCAGTGGAAC GGAAAAAAAG TTTTTGAGGT TTACCGGGCT
TTTGTGCCGC TGGCTGATGT TCGGCCCATG CCCATGCCCA TGCCCATGCG CGGGCATGGG
CAACATATGG GCCGCGGGCG CAGTATGGGC GGCGCAGGCA TGCCGCATGG CCCCATGACC
CTGAAAGATA TGAGCCCGCC CGGTTCCATG CGGCCCATGC CGGAAGGCAG ACACGGGGGC
ATGTCTTCCT CCGGACCAGG CGTCATGCCT GGCGGCGCCG AAGGGCAATG GCAGCAGGAG
CAGGTCCGGC AGCCCATGGG CGTGGTGGTG ATCGGGCTTG ACCTCAAGCC TTTTGAAGCC
GCGCTGGCAG CAGATTTACG CCACAATCTC ACCTCGGCGG CCCTTCTTGC GGCCCTGGGG
CTTGCCGGTT TTGTTTCCCT GTTCTGGGCG CACAACTACC GCCGTTCACG ACGTATGTTG
CGCGATTCCC GGGCCATGGC TTCGGAGGTC GTTGCCAATC TGCCTCTGGG GCTTCTCACC
AGCGACCCTT ACGGCAGGGT CGCCATGGTC AACGACACGG CCCTGAGCAT GTTTGAACTG
GACAGAAGTA CAGCTGTGTA CGCGCCCCTG ACCGGCCTGC CAGGTCTGGA CTGGAGCGCC
CTTGTGGCGG AGCTGGCCAG CGGGCGAAAG GTGCTTGAGC GTGAGTGCGC GCTCACCACA
GGCCGGGCGG GAGCCGTCAT CAGCCTAAGT GCGGCATCCA TGCACAATCA GGATGGCGTG
TTTCTCGGCA ACGTGTTCAT CCTCAGGGAC ATAACCGAGG TCAAACGCCT GCAGGCCGAC
GCACAGCGCA ACGACCGCCT GTCCGCCTTG GGGCATCTGG CGGCGGGTGT GGCGCACGAG
GTGCGCAATC CCCTGAGCAC CATCAAGGGG GTGGCCCTGT ATATAGCCAA ACGCATGTTG
CCCGGCGGCC GGGAAGAAGA GGCCGCGCAA CGCATGATTG ACGAAGTGGA CAGGCTCGAC
CGCGTGGTGT CTGAATTGCT GGAATTTGCC CGGCCCGGAG CCATCAATAC GGCTGAAGCC
GACCTTGCAG AAGTGATCGG CCGTGCGTTG AGGCTGGCAG AGGCTGATAT GCGCTCACGG
CATATTCATG TGGTTCTTGA TGTGCCGCCG GGCCTGCCGC CAGTGCGCGT CAACACCGAG
CGGCTTACCC AGGCCCTGCT GAATCTTTTT CTCAACGCTG CGCAGGCTAT GGGGGAGGGC
GGCGAACTGC GCGTGGGCGC GCGACTCTGT TCCGGCGGGC AGACCTTCTG CATCACGGTG
GCCGATAACG GACCAGGCAT TGCCAGAGAC ATTCAGGCGG CCATTTTTAC GCCCTATTTT
ACGACCAAGC CTTCAGGCAC GGGCCTTGGC CTTGCCATTG TACACCAGAT TGTGGAAGGC
CACGGCGGCA ATGTCAGCGT GACCTCTGCG CCTGGCCGGG GTACGGAATT TACCCTTGAA
CTGCCGGTGC GGGGCAGGGA TGCTGCTCCG GCGGGCGGAT AA
 
Protein sequence
MKSRVSRLFS ARGLRALHLG LSPWMVVGMA IILGLAITAL AVRSNQRGKT YMIQNLIDRA 
EALIWALEAG ARTGLCTPLG TLGTTDGLQS LLTETAKQPG IVFMAVASDE GKMLAYSVPV
RNRDRSRPER ENASPREMTG VQPGERALAL IMPTGVQVTE KPAWRIRQWN GKKVFEVYRA
FVPLADVRPM PMPMPMRGHG QHMGRGRSMG GAGMPHGPMT LKDMSPPGSM RPMPEGRHGG
MSSSGPGVMP GGAEGQWQQE QVRQPMGVVV IGLDLKPFEA ALAADLRHNL TSAALLAALG
LAGFVSLFWA HNYRRSRRML RDSRAMASEV VANLPLGLLT SDPYGRVAMV NDTALSMFEL
DRSTAVYAPL TGLPGLDWSA LVAELASGRK VLERECALTT GRAGAVISLS AASMHNQDGV
FLGNVFILRD ITEVKRLQAD AQRNDRLSAL GHLAAGVAHE VRNPLSTIKG VALYIAKRML
PGGREEEAAQ RMIDEVDRLD RVVSELLEFA RPGAINTAEA DLAEVIGRAL RLAEADMRSR
HIHVVLDVPP GLPPVRVNTE RLTQALLNLF LNAAQAMGEG GELRVGARLC SGGQTFCITV
ADNGPGIARD IQAAIFTPYF TTKPSGTGLG LAIVHQIVEG HGGNVSVTSA PGRGTEFTLE
LPVRGRDAAP AGG