Gene Tcr_1445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_1445 
Symbol 
ID3760792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp1562445 
End bp1563617 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content42% 
IMG OID637786176 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_391711 
Protein GI78485786 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTGCAA TCGAAAAGGA AGTTGAACAA AAGCGTTTAG CCGAATTAGA AGAGGCCTTT 
GAACTTTTTA ATCAAACTTC CTCGCAACTG ACGGTCGCGT ATGAATCCTT ACAAAATCAA
GTAGAAGATT TACAAGAAAA GTTAGCGGAA AGTAACCGTG AAAAGCACCA AGTTGGTGAA
CGTCTTGAAC AATTATTAAA TCTTCTACCT GCCGGTGTTA TTGTCTTAGA TGAGCAACAA
AGAATCACTG ATATGAATCC GGCAGCCGAA AATATTCTAG GAAAAGATGC GGTAGGACGT
CTTTGGGATG TGGTGGTTAG GAATGCTTTT TTAACGTTCA ATGATGCCGG AGAGCTTATT
ACTCATAACC AAATGACGTT TCAATTATCC GAATCCCCTC TAAATTTTTC TTTTGATGGC
CAAAATGTTA CAGGTAAGAT TTTATTGATT CAGGATGTGA CGGATGCCAG AGATTTGCAA
CAGCATATCA GTCGTCATCA ACGTTTAAGT TCCATGGGGG AAATGGCCGC TTCTTTAGCA
CACCAGATTC GAACTCCTCT TGCGTCAGCC TTGCTTTATG TTTCCCAAAT GTCTTCCGGT
CAATTAGATT CTCAAAAACG AGAAAAGTTT GTTCACAAAT CGTTAAACAG TTTGCGTCAC
CTTGAATCCT TAGTGAACGA TATGTTGCAG TACGCAAAAG GCGGCAAGGC GAAAGATCAA
AAAGTGGCGG TGGATGCATT GCTAGAGAAC TTAAAGCAAG CGGTTGAGGC AAAAGCCCAA
CAATCAAGAA GTGTGATTGA ATTTGATGAA ATTCCGCCAG GCCTGGTCGT TTTAGGGGAT
CAAGACGCTC TGTTAACAGC CTTAGAGAAT TTGGTAAGTA ATGCGATTGA CATTGTTTCT
GAACAGGCGG AAATTTCAGT TTCAGTGAAA ACAACACAGA ATTTGGTTGA TATTATGGTT
GCAGATAATG GACCAGGATT GACAGAAGAA ATGAATGAGA AAATTTTTGA ACCTTTTTTT
ACCAGTCGTG CACAAGGGAC AGGACTTGGT TTAGCGGTGG TTAGAGCCGT GGCTGAAGCA
CATGGGGGAG AAGTATGGGT GAACTCGGTA GTGGGAAGAG GGGCCGTTTT CGGCGTGCGC
TTACCCTTGT TGAAAATTGA GGAGAGCTCA TGA
 
Protein sequence
MSAIEKEVEQ KRLAELEEAF ELFNQTSSQL TVAYESLQNQ VEDLQEKLAE SNREKHQVGE 
RLEQLLNLLP AGVIVLDEQQ RITDMNPAAE NILGKDAVGR LWDVVVRNAF LTFNDAGELI
THNQMTFQLS ESPLNFSFDG QNVTGKILLI QDVTDARDLQ QHISRHQRLS SMGEMAASLA
HQIRTPLASA LLYVSQMSSG QLDSQKREKF VHKSLNSLRH LESLVNDMLQ YAKGGKAKDQ
KVAVDALLEN LKQAVEAKAQ QSRSVIEFDE IPPGLVVLGD QDALLTALEN LVSNAIDIVS
EQAEISVSVK TTQNLVDIMV ADNGPGLTEE MNEKIFEPFF TSRAQGTGLG LAVVRAVAEA
HGGEVWVNSV VGRGAVFGVR LPLLKIEESS