Gene Gbem_1533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGbem_1533 
Symbol 
ID6781521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter bemidjiensis Bem 
KingdomBacteria 
Replicon accessionNC_011146 
Strand
Start bp1777628 
End bp1779094 
Gene Length1467 bp 
Protein Length488 aa 
Translation table11 
GC content63% 
IMG OID642767527 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_002138347 
Protein GI197117920 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCTA CCCGGTTCAG CCTCACCTTC TATACCCTCT CCGCCCTGAG CATCATGCTG 
GTGCTCACCT GGGTGCTTCT TTCCGTAATC TCCTTCAACA CCGCCGAAAA AGACCTGCTG
AACCAAAAGG GGGAAGAAGG AAAGCTGTTG CTTTCCAGCA TCGTCCTTCT GCTGCCGCGT
CCTTTGGCCC CGCCCGAACC AGGTTCGGCC GCGGCCAAGT ACCTGGAGCA CCTTAGGAAG
GACCGTGCCT TCGTGGGGCT GCTGGTGATC GATTCCGCGG GGCGAGACCT CTACACCCTC
TCCGATCCGG GCGGGGCCAA TGCCGCTTTG CTCGGCGTAT TGCGCCGTGG GCGCGGGACC
TTCCAGGTGT CGCCGGACGG CCGGCTTGCG TGGTGCTACC TTCCGGTCAT GGAGCAGGGG
AGGGCGATCG GGGCGGCTCG GCTCACCCTG TCGCTGCTTC CCGAGCGGGA AAAGCTCAGA
GGTTCCCGGA ACCTTTTTCT TTCCTACTTC ATCCTCGATT TCCTGCTGCT CCTGGTGGTC
GGCTCATATC TTCTTTCCTC AAGCGTAGTT GTGCCGATAA GAAGACTGTT GGCGGCGACC
CGCAGAATCG CGGCGGGGGA TTTGAGCGGC ACCGTGGACA TCCCCGGAAG CCAGGAAGTG
GCGGAACTGG GCGACGCCTT CAATACGATG GTGGTGGCGC TCAGGGAGAA GAGGGAGGAG
GTCGAGGCAA ATGTAGCCTC CTTGAACCGC GCCAACCGGG AGATCATCGA GGCGCGCAAC
GAGGCGATAC GTTCCGAGAA GATGGCGTCC GTTGGGCTTT TGGCGGCCGG GATGGCACAC
GAAATCGGGA CTCCGCTTGC GGCCATCATG GGGTACAGCG GGATTCTCTC CGAGGAGGTT
GCCGGCGACC CGGAGAAGTC AGATTACCTG CGCAGGATCA CCGAAGAGTC GAAGCGGATC
GACAGGATCG TCAGGGGGCT TTTGGACTAT GCCCGGCCCA AGGGTAGCCA GCGTGAGGAA
ATAGAAGTGC TGCAGCTGTT GGAGAAGGTG GTGGAGCTTC TGGAGGCACA GGGGGCGTTG
AAGCTCTTGG AGGTCACGGT CGAGGCGGAG CCGTCCCTGC CGCGGCTGTA TGCCGACCCG
CACCAGTTGG AGCAGCTGCT CATCAACCTC ATCATGAATG CCAAGGATGC CATGCCCAAG
GGGGGCAAGC TGCAGCTCAA GGGGATGAGC GTGGGAGGGG GCGTCGCCAT CGAGGTTGCC
GACACCGGTG AAGGTATGCC GCCCGAGCAC CTGCCGCTGG TATTCGACCC CTTCTTCACC
ACCAAGGAGC CCGGTAAGGG AACCGGTCTG GGGCTAGCCA TCGCGGCCAG GATAGCCGAG
TCGTGCGGCG GGACACTCAC CGTGCAAAGC GAGTTGGGAG AGGGGAGCCG GTTCAGGCTG
ACGCTGCCGG CGGGAGGCAG TGGCTAG
 
Protein sequence
MKPTRFSLTF YTLSALSIML VLTWVLLSVI SFNTAEKDLL NQKGEEGKLL LSSIVLLLPR 
PLAPPEPGSA AAKYLEHLRK DRAFVGLLVI DSAGRDLYTL SDPGGANAAL LGVLRRGRGT
FQVSPDGRLA WCYLPVMEQG RAIGAARLTL SLLPEREKLR GSRNLFLSYF ILDFLLLLVV
GSYLLSSSVV VPIRRLLAAT RRIAAGDLSG TVDIPGSQEV AELGDAFNTM VVALREKREE
VEANVASLNR ANREIIEARN EAIRSEKMAS VGLLAAGMAH EIGTPLAAIM GYSGILSEEV
AGDPEKSDYL RRITEESKRI DRIVRGLLDY ARPKGSQREE IEVLQLLEKV VELLEAQGAL
KLLEVTVEAE PSLPRLYADP HQLEQLLINL IMNAKDAMPK GGKLQLKGMS VGGGVAIEVA
DTGEGMPPEH LPLVFDPFFT TKEPGKGTGL GLAIAARIAE SCGGTLTVQS ELGEGSRFRL
TLPAGGSG