More than 300 homologs were found in PanDaTox collection
for query gene Acid345_2167 on replicon NC_008009
Organism: Candidatus Koribacter versatilis Ellin345



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008009  Acid345_2167  response regulator receiver protein  100 
 
 
204 aa  414  9.999999999999999e-116  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.965673 
 
 
-
 
NC_008009  Acid345_2479  response regulator receiver protein  56.35 
 
 
204 aa  152  4e-36  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.303056 
 
 
-
 
NC_008009  Acid345_4655  response regulator receiver protein  43.55 
 
 
125 aa  110  2.0000000000000002e-23  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.230035  normal 
 
 
-
 
NC_013515  Smon_0737  two component transcriptional regulator, winged helix family  31.61 
 
 
224 aa  82.4  0.000000000000004  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_009972  Haur_0719  multi-sensor signal transduction histidine kinase  35.38 
 
 
531 aa  82  0.000000000000006  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_0931  response regulator receiver modulated diguanylate cyclase  37.5 
 
 
457 aa  80.5  0.00000000000001  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.436852  normal  0.104843 
 
 
-
 
NC_010172  Mext_0967  diguanylate cyclase  37.5 
 
 
457 aa  80.5  0.00000000000001  Methylobacterium extorquens PA1  Bacteria  normal  0.555277  normal  0.0207283 
 
 
-
 
NC_010725  Mpop_0907  response regulator receiver modulated diguanylate cyclase  38.24 
 
 
457 aa  80.5  0.00000000000002  Methylobacterium populi BJ001  Bacteria  normal  0.401363  normal  0.40647 
 
 
-
 
NC_011729  PCC7424_1422  response regulator receiver sensor signal transduction histidine kinase  34.33 
 
 
361 aa  80.5  0.00000000000002  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_010001  Cphy_1954  two component transcriptional regulator  32.41 
 
 
229 aa  79  0.00000000000005  Clostridium phytofermentans ISDg  Bacteria  decreased coverage  0.000155813  n/a   
 
 
-
 
NC_009253  Dred_1269  signal transduction histidine kinase, nitrogen specific, NtrB  32.84 
 
 
509 aa  78.6  0.00000000000006  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0050  two component transcriptional regulator, winged helix family  31.72 
 
 
235 aa  77.4  0.0000000000001  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_3814  response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor  37.86 
 
 
1131 aa  77  0.0000000000002  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.257486 
 
 
-
 
NC_014248  Aazo_4229  response regulator receiver sensor signal transduction histidine kinase  30 
 
 
383 aa  76.6  0.0000000000002  'Nostoc azollae' 0708  Bacteria  normal  0.599633  n/a   
 
 
-
 
NC_013757  Gobs_4602  two component transcriptional regulator, winged helix family  39.84 
 
 
226 aa  77  0.0000000000002  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_03422  hypothetical protein  37.38 
 
 
1128 aa  76.6  0.0000000000002  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_010506  Swoo_1961  multi-sensor hybrid histidine kinase  37.72 
 
 
1713 aa  75.9  0.0000000000004  Shewanella woodyi ATCC 51908  Bacteria  normal  0.280335  normal  0.123564 
 
 
-
 
NC_011831  Cagg_2404  response regulator receiver protein  34.91 
 
 
119 aa  75.5  0.0000000000005  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.190427 
 
 
-
 
NC_011312  VSAL_I2575  chitin degradation sensor protein  31.94 
 
 
1127 aa  75.1  0.0000000000006  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_002587  chitin catabolic cascade sensor histidine kinase ChiS  36.45 
 
 
1111 aa  75.1  0.0000000000007  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_007614  Nmul_A2207  multi-sensor hybrid histidine kinase  38.05 
 
 
866 aa  74.7  0.0000000000008  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_6679  response regulator receiver modulated diguanylate cyclase  34.81 
 
 
457 aa  75.1  0.0000000000008  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_0506  adenylate/guanylate cyclase  33.57 
 
 
380 aa  73.9  0.000000000001  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.149903  n/a   
 
 
-
 
NC_013595  Sros_3423  response regulator receiver protein  40.38 
 
 
224 aa  74.3  0.000000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.699539  normal  0.107362 
 
 
-
 
NC_008347  Mmar10_1277  response regulator receiver modulated diguanylate cyclase  34.33 
 
 
454 aa  73.9  0.000000000001  Maricaulis maris MCS10  Bacteria  normal  0.410696  normal  0.0388481 
 
 
-
 
NC_012850  Rleg_1382  response regulator PleD  32.7 
 
 
457 aa  74.3  0.000000000001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.390598 
 
 
-
 
NC_011369  Rleg2_1290  response regulator PleD  32.18 
 
 
457 aa  73.6  0.000000000002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.0138689  hitchhiker  0.00259394 
 
 
-
 
NC_011884  Cyan7425_2570  response regulator receiver sensor signal transduction histidine kinase  33.61 
 
 
381 aa  73.2  0.000000000002  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_0702  response regulator receiver modulated metal dependent phosphohydrolase  29.17 
 
 
331 aa  73.2  0.000000000002  Roseiflexus sp. RS-1  Bacteria  normal  0.140022  normal 
 
 
-
 
NC_009457  VC0395_A0150  sensory box sensor histidine kinase/response regulator  30.33 
 
 
1177 aa  73.2  0.000000000002  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_3616  response regulator receiver Signal transduction histidine kinase  36.52 
 
 
393 aa  72.8  0.000000000003  Anabaena variabilis ATCC 29413  Bacteria  normal  0.159723  normal  0.789101 
 
 
-
 
NC_007912  Sde_2296  response regulator receiver domain-containing protein  36.72 
 
 
222 aa  73.2  0.000000000003  Saccharophagus degradans 2-40  Bacteria  normal  hitchhiker  0.0000621544 
 
 
-
 
NC_008009  Acid345_2411  PAS/PAC sensor hybrid histidine kinase  34.31 
 
 
497 aa  72.8  0.000000000003  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A0780  DNA-binding response regulator  32.41 
 
 
225 aa  73.2  0.000000000003  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_0809  response regulator receiver sensor signal transduction histidine kinase  30.95 
 
 
367 aa  72.8  0.000000000003  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_0424  response regulator receiver modulated diguanylate cyclase  34.21 
 
 
469 aa  72.4  0.000000000004  Methylocella silvestris BL2  Bacteria  n/a    normal  0.97349 
 
 
-
 
NC_002977  MCA1440  response regulator  36.04 
 
 
391 aa  72.8  0.000000000004  Methylococcus capsulatus str. Bath  Bacteria  normal  0.0677305  n/a   
 
 
-
 
NC_007513  Syncc9902_0153  two component transcriptional regulator  31.71 
 
 
253 aa  72.4  0.000000000004  Synechococcus sp. CC9902  Bacteria  normal  0.711737  n/a   
 
 
-
 
NC_007516  Syncc9605_0109  two component transcriptional regulator  31.1 
 
 
253 aa  72.4  0.000000000004  Synechococcus sp. CC9605  Bacteria  normal  0.427788  normal  0.468211 
 
 
-
 
NC_013947  Snas_1054  response regulator receiver protein  34.19 
 
 
188 aa  72.8  0.000000000004  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_37500  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  36.36 
 
 
225 aa  72.8  0.000000000004  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0213695  normal 
 
 
-
 
NC_009664  Krad_0896  two component transcriptional regulator, winged helix family  31.06 
 
 
226 aa  72  0.000000000005  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.232326  hitchhiker  0.00518822 
 
 
-
 
NC_009972  Haur_2799  two component transcriptional regulator  31.37 
 
 
236 aa  72  0.000000000005  Herpetosiphon aurantiacus ATCC 23779  Bacteria  unclonable  0.000000368356  n/a   
 
 
-
 
NC_013093  Amir_6310  two component transcriptional regulator, winged helix family  34.36 
 
 
261 aa  72  0.000000000005  Actinosynnema mirum DSM 43827  Bacteria  normal  0.534044  n/a   
 
 
-
 
NC_007298  Daro_0012  response regulator receiver  34.35 
 
 
377 aa  72  0.000000000006  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.0552217 
 
 
-
 
NC_013521  Sked_01690  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  40.78 
 
 
217 aa  72  0.000000000006  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.459553  normal  0.405302 
 
 
-
 
NC_013515  Smon_1490  two component transcriptional regulator, winged helix family  31.82 
 
 
225 aa  72  0.000000000006  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_008699  Noca_1613  response regulator receiver  38.83 
 
 
225 aa  72  0.000000000006  Nocardioides sp. JS614  Bacteria  normal  0.97266  n/a   
 
 
-
 
NC_011729  PCC7424_2188  response regulator receiver sensor signal transduction histidine kinase  30.43 
 
 
384 aa  71.6  0.000000000007  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.00677544 
 
 
-
 
NC_009767  Rcas_3177  adenylate/guanylate cyclase with GAF and PAS/PAC sensors  35.38 
 
 
971 aa  71.6  0.000000000007  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_0367  multi-sensor signal transduction histidine kinase  31.54 
 
 
503 aa  71.6  0.000000000007  Opitutus terrae PB90-1  Bacteria  normal  normal  0.0540164 
 
 
-
 
NC_013517  Sterm_2324  two component transcriptional regulator, winged helix family  32.03 
 
 
223 aa  71.6  0.000000000007  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.237639  n/a   
 
 
-
 
NC_009719  Plav_2815  response regulator receiver modulated diguanylate cyclase  34.81 
 
 
457 aa  71.2  0.000000000008  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.631579  normal  0.0857187 
 
 
-
 
NC_009636  Smed_0926  response regulator PleD  30.26 
 
 
455 aa  71.2  0.000000000008  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.773886 
 
 
-
 
NC_009523  RoseRS_2694  putative PAS/PAC sensor protein  36.15 
 
 
969 aa  71.6  0.000000000008  Roseiflexus sp. RS-1  Bacteria  normal  0.0176534  normal 
 
 
-
 
NC_009767  Rcas_4207  response regulator receiver protein  33.33 
 
 
120 aa  71.2  0.000000000009  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.771701  normal  0.140814 
 
 
-
 
NC_009439  Pmen_3647  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  35.29 
 
 
715 aa  71.2  0.000000000009  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_0719  DNA-binding response regulator  31.97 
 
 
225 aa  70.9  0.00000000001  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_0035  response regulator receiver protein  33.33 
 
 
120 aa  70.9  0.00000000001  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_20650  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  34.06 
 
 
231 aa  71.2  0.00000000001  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0260682  n/a   
 
 
-
 
NC_013385  Adeg_0644  two component transcriptional regulator, winged helix family  34.43 
 
 
236 aa  70.9  0.00000000001  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_4249  ATP-binding region ATPase domain protein  34.29 
 
 
374 aa  70.9  0.00000000001  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_007796  Mhun_2691  putative PAS/PAC sensor protein  30.7 
 
 
385 aa  70.9  0.00000000001  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.10412 
 
 
-
 
NC_013159  Svir_30940  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  32.5 
 
 
225 aa  70.9  0.00000000001  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_0512  response regulator receiver modulated metal dependent phosphohydrolase  24.87 
 
 
368 aa  70.9  0.00000000001  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00189837  n/a   
 
 
-
 
NC_008578  Acel_2099  response regulator receiver modulated diguanylate phosphodiesterase  42.06 
 
 
402 aa  70.9  0.00000000001  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.316821 
 
 
-
 
NC_008699  Noca_3695  response regulator receiver  34.51 
 
 
236 aa  70.9  0.00000000001  Nocardioides sp. JS614  Bacteria  normal  0.795948  n/a   
 
 
-
 
NC_010001  Cphy_0154  two component transcriptional regulator  32.22 
 
 
238 aa  70.5  0.00000000001  Clostridium phytofermentans ISDg  Bacteria  normal  0.644268  n/a   
 
 
-
 
NC_011059  Paes_0769  two component transcriptional regulator, winged helix family  30.5 
 
 
236 aa  71.2  0.00000000001  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0082  two component transcriptional regulator  34.72 
 
 
228 aa  71.2  0.00000000001  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_1656  response regulator receiver protein  35.82 
 
 
166 aa  70.9  0.00000000001  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0563  response regulator  31.97 
 
 
225 aa  70.1  0.00000000002  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_1750  response regulator PleD  35.71 
 
 
457 aa  70.1  0.00000000002  Agrobacterium vitis S4  Bacteria  normal  0.263569  n/a   
 
 
-
 
NC_009783  VIBHAR_01620  Signal transduction histidine kinase  32.14 
 
 
806 aa  70.5  0.00000000002  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_010571  Oter_3794  response regulator receiver sensor signal transduction histidine kinase  34.21 
 
 
376 aa  70.1  0.00000000002  Opitutus terrae PB90-1  Bacteria  normal  0.0277983  normal  0.543799 
 
 
-
 
NC_010338  Caul_3549  multi-sensor hybrid histidine kinase  39.25 
 
 
702 aa  70.5  0.00000000002  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_1342  two component transcriptional regulator, winged helix family  34.59 
 
 
234 aa  70.1  0.00000000002  Geobacter bemidjiensis Bem  Bacteria  normal  0.0144629  n/a   
 
 
-
 
NC_009668  Oant_3677  response regulator PleD  32.12 
 
 
461 aa  70.1  0.00000000002  Ochrobactrum anthropi ATCC 49188  Bacteria  decreased coverage  0.00345303  n/a   
 
 
-
 
NC_008554  Sfum_2303  response regulator receiver protein  30.08 
 
 
227 aa  70.1  0.00000000002  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_4619  two component transcriptional regulator  33.33 
 
 
245 aa  70.1  0.00000000002  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0926269 
 
 
-
 
NC_009675  Anae109_0804  multi-sensor signal transduction histidine kinase  32.77 
 
 
663 aa  70.1  0.00000000002  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.296509  normal  0.022202 
 
 
-
 
NC_008816  A9601_18291  two-component response regulator  30.86 
 
 
248 aa  69.7  0.00000000002  Prochlorococcus marinus str. AS9601  Bacteria  normal  0.276613  n/a   
 
 
-
 
NC_010814  Glov_3113  multi-sensor hybrid histidine kinase  33.33 
 
 
898 aa  70.1  0.00000000002  Geobacter lovleyi SZ  Bacteria  normal  0.265974  n/a   
 
 
-
 
NC_009012  Cthe_1825  Hpt sensor hybrid histidine kinase  31.9 
 
 
932 aa  70.1  0.00000000002  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_3069  two component transcriptional regulator  34.62 
 
 
230 aa  70.1  0.00000000002  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.0000000467461  n/a   
 
 
-
 
NC_013552  DhcVS_143  DNA-binding response regulator, two-component system, OmpR family  28.33 
 
 
256 aa  70.5  0.00000000002  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_2473  GAF sensor hybrid histidine kinase  36.52 
 
 
1792 aa  70.1  0.00000000002  Methylocella silvestris BL2  Bacteria  n/a    normal  0.443525 
 
 
-
 
NC_005945  BAS0618  DNA-binding response regulator  31.78 
 
 
225 aa  69.7  0.00000000003  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0562  response regulator  31.78 
 
 
225 aa  69.7  0.00000000003  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_1554  two component transcriptional regulator  37.5 
 
 
218 aa  69.7  0.00000000003  Salinispora arenicola CNS-205  Bacteria  normal  0.083917  hitchhiker  0.00805861 
 
 
-
 
NC_011145  AnaeK_4252  multi-sensor signal transduction histidine kinase  34.04 
 
 
712 aa  69.7  0.00000000003  Anaeromyxobacter sp. K  Bacteria  normal  0.374039  n/a   
 
 
-
 
NC_007530  GBAA_0651  DNA-binding response regulator  31.78 
 
 
225 aa  69.7  0.00000000003  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2710  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  35.24 
 
 
704 aa  69.3  0.00000000003  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.00325078 
 
 
-
 
NC_013385  Adeg_1011  two component transcriptional regulator, winged helix family  33.33 
 
 
231 aa  69.3  0.00000000003  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0565  two component transcriptional regulator  31.29 
 
 
225 aa  69.7  0.00000000003  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_2264  Serine phosphatase RsbU regulator of sigma subunit-like protein  30.71 
 
 
525 aa  69.7  0.00000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0874374 
 
 
-
 
NC_008789  Hhal_1215  nitrogen metabolism transcriptional regulator, NtrC, Fis family  33.85 
 
 
471 aa  69.3  0.00000000003  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_008817  P9515_18081  two-component response regulator  30.67 
 
 
248 aa  69.7  0.00000000003  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  n/a   
 
 
-
 
NC_009091  P9301_18111  two-component response regulator  30.86 
 
 
248 aa  69.7  0.00000000003  Prochlorococcus marinus str. MIT 9301  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_1594  response regulator receiver  38.46 
 
 
219 aa  69.3  0.00000000003  Salinispora tropica CNB-440  Bacteria  normal  0.349405  normal 
 
 
-
 
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