| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_2296 |
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| Symbol | |
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| ID | 3967349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 2920726 |
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| End bp | 2921394 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637921387 |
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| Product | response regulator receiver domain-containing protein |
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| Protein accession | YP_527768 |
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| Protein GI | 90021941 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0000621544 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATGCTAA TTCTGCTTGT TGAAGATAAC CGAGACCTCG CCGCAACAGT ACTCGACTAC
TTAGAGCTGC AAGGCTTTGA CTGCGATTAC GCGCACCGTG GCGACCATGC CTTTCAGTTA
CTGCAAGACA ATACCTACGA CGCAATGGTG TTGGATATTA TGATGCCAGG TTTAGACGGT
ATTACCCTTT GCGAAAAAAT TCGCGCACAG GGCAACAACG CCCCCATTAT TATGCTCACT
GCCCGCGACA CCCTAGAAGA CAAGCTCTCG GGCTTTGAAG CAGGCGCAGA TGATTACCTT
GTTAAACCTT TCGATTTGCC CGAACTTGCT GCCCGCCTAA AGGCGTTAAG CAAACGCAAA
TCGCATAGCA GTACAACGCT TACTGTTGCA GATTTAGAAG CCCACTTAGA AAACCATCAG
GTTTGCCGCG CGGGCCAACA AATAGACCTC TCCCCCGCTT GCTGGAAACT ACTCATCGCG
CTTATGCAAG CTAGCCCACG GGTTATGTCT CGCCAAGAGC TAGAAAACGT ATTGTGGAAA
GATAGCCCAC CCGATTCTGA AGCACTCAAG TCGCATATGT ATACATTGCG TAAATTAGTA
GACAAACCAT TTGATAAAGC GCTCATTCAT ACGTTGCGTG GAGTAGGTGT AGCACTGCGC
GATGAATAG
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| Protein sequence | MMLILLVEDN RDLAATVLDY LELQGFDCDY AHRGDHAFQL LQDNTYDAMV LDIMMPGLDG
ITLCEKIRAQ GNNAPIIMLT ARDTLEDKLS GFEAGADDYL VKPFDLPELA ARLKALSKRK
SHSSTTLTVA DLEAHLENHQ VCRAGQQIDL SPACWKLLIA LMQASPRVMS RQELENVLWK
DSPPDSEALK SHMYTLRKLV DKPFDKALIH TLRGVGVALR DE
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