More than 300 homologs were found in PanDaTox collection
for query gene Sfum_2303 on replicon NC_008554
Organism: Syntrophobacter fumaroxidans MPOB



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008554  Sfum_2303  response regulator receiver protein  100 
 
 
227 aa  471  1e-132  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_2062  response regulator receiver protein  42.44 
 
 
217 aa  169  2e-41  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0360  response regulator receiver protein  45.15 
 
 
204 aa  166  2e-40  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000726536 
 
 
-
 
NC_011146  Gbem_0378  response regulator receiver protein  43.69 
 
 
204 aa  164  6.9999999999999995e-40  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_3134  response regulator receiver protein  41.06 
 
 
200 aa  161  8.000000000000001e-39  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_2347  response regulator receiver protein  40.58 
 
 
202 aa  155  4e-37  Roseiflexus sp. RS-1  Bacteria  normal  0.56815  normal 
 
 
-
 
NC_011729  PCC7424_0178  response regulator receiver modulated diguanylate cyclase  55.47 
 
 
322 aa  152  2.9999999999999998e-36  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.895619 
 
 
-
 
NC_007520  Tcr_2179  response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase  57.72 
 
 
348 aa  150  2e-35  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.378064  n/a   
 
 
-
 
NC_014248  Aazo_1477  response regulator receiver modulated diguanylate cyclase  51.06 
 
 
317 aa  144  1e-33  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_0799  response regulator receiver protein  40.49 
 
 
225 aa  142  4e-33  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0846  response regulator receiver protein  40.49 
 
 
225 aa  142  5e-33  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009012  Cthe_1826  response regulator receiver sensor signal transduction histidine kinase  51.88 
 
 
363 aa  140  9.999999999999999e-33  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_1577  response regulator receiver modulated diguanylate cyclase  42.95 
 
 
314 aa  137  8.999999999999999e-32  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_1139  response regulator receiver modulated diguanylate cyclase  46.15 
 
 
308 aa  137  2e-31  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_1169  response regulator receiver modulated diguanylate cyclase  46.15 
 
 
308 aa  137  2e-31  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_2041  response regulator receiver modulated diguanylate cyclase  50 
 
 
317 aa  135  5e-31  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_2067  response regulator receiver modulated diguanylate cyclase  50 
 
 
317 aa  135  5e-31  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_0959  response regulator receiver sensor signal transduction histidine kinase  48.37 
 
 
372 aa  135  7.000000000000001e-31  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_2507  two component, sigma54 specific, transcriptional regulator, Fis family  41.85 
 
 
488 aa  134  9.999999999999999e-31  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.182398 
 
 
-
 
NC_007413  Ava_2149  response regulator receiver Signal transduction histidine kinase  47.52 
 
 
407 aa  129  3e-29  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.142048 
 
 
-
 
NC_008312  Tery_0661  adenylate/guanylate cyclase  48.46 
 
 
1133 aa  129  3e-29  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_0662  adenylate/guanylate cyclase  48.03 
 
 
1130 aa  127  2.0000000000000002e-28  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_2429  response regulator receiver modulated metal dependent phosphohydrolase  43.75 
 
 
480 aa  125  4.0000000000000003e-28  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.129673 
 
 
-
 
NC_014248  Aazo_4229  response regulator receiver sensor signal transduction histidine kinase  39.08 
 
 
383 aa  125  7e-28  'Nostoc azollae' 0708  Bacteria  normal  0.599633  n/a   
 
 
-
 
NC_013522  Taci_1373  response regulator receiver modulated metal dependent phosphohydrolase  43.24 
 
 
365 aa  125  8.000000000000001e-28  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_4080  DNA-binding response regulator, LuxR family  43.12 
 
 
222 aa  124  1e-27  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.542388  n/a   
 
 
-
 
NC_008781  Pnap_0979  response regulator receiver protein  47.33 
 
 
336 aa  124  1e-27  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_0045  adenylate/guanylate cyclase  41.84 
 
 
382 aa  123  2e-27  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010571  Oter_0809  response regulator receiver sensor signal transduction histidine kinase  50 
 
 
367 aa  123  2e-27  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_4060  response regulator receiver modulated metal dependent phosphohydrolase  42.11 
 
 
365 aa  123  2e-27  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.0748941 
 
 
-
 
NC_010524  Lcho_3702  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  42.59 
 
 
863 aa  123  3e-27  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.170309 
 
 
-
 
NC_010571  Oter_3856  response regulator receiver sensor signal transduction histidine kinase  39.63 
 
 
378 aa  122  4e-27  Opitutus terrae PB90-1  Bacteria  normal  normal  0.215089 
 
 
-
 
NC_011729  PCC7424_0984  response regulator receiver modulated diguanylate cyclase  34.69 
 
 
353 aa  122  4e-27  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.194443 
 
 
-
 
NC_011726  PCC8801_0820  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  41.45 
 
 
593 aa  122  5e-27  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_007796  Mhun_1941  response regulator receiver domain-containing protein  45.67 
 
 
156 aa  122  5e-27  Methanospirillum hungatei JF-1  Archaea  normal  normal 
 
 
-
 
NC_013161  Cyan8802_0849  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  41.45 
 
 
593 aa  122  5e-27  Cyanothece sp. PCC 8802  Bacteria  normal  0.386146  normal 
 
 
-
 
NC_011884  Cyan7425_3210  response regulator receiver modulated diguanylate cyclase  44.87 
 
 
337 aa  122  6e-27  Cyanothece sp. PCC 7425  Bacteria  normal  0.32327  normal  0.712325 
 
 
-
 
NC_011146  Gbem_3274  response regulator receiver sensor signal transduction histidine kinase  48.82 
 
 
383 aa  121  8e-27  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0975  response regulator receiver sensor signal transduction histidine kinase  50 
 
 
383 aa  121  8e-27  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007413  Ava_4136  response regulator receiver Signal transduction histidine kinase  42.31 
 
 
440 aa  121  9e-27  Anabaena variabilis ATCC 29413  Bacteria  decreased coverage  0.00000660181  hitchhiker  0.00876613 
 
 
-
 
NC_008228  Patl_2248  response regulator receiver modulated metal dependent phosphohydrolase  48.23 
 
 
331 aa  120  9.999999999999999e-27  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_011728  BbuZS7_0421  response regulatory protein  47.97 
 
 
305 aa  120  1.9999999999999998e-26  Borrelia burgdorferi ZS7  Bacteria  normal  0.972098  n/a   
 
 
-
 
NC_010814  Glov_2955  response regulator receiver modulated diguanylate cyclase  47.37 
 
 
308 aa  120  1.9999999999999998e-26  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_013161  Cyan8802_1510  response regulator receiver sensor signal transduction histidine kinase  37.58 
 
 
374 aa  119  3e-26  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_1483  response regulator receiver sensor signal transduction histidine kinase  37.58 
 
 
374 aa  119  3e-26  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_010571  Oter_1720  two component LuxR family transcriptional regulator  37.35 
 
 
301 aa  119  3e-26  Opitutus terrae PB90-1  Bacteria  normal  0.162572  normal  0.616267 
 
 
-
 
NC_013522  Taci_0090  two component transcriptional regulator, winged helix family  47.9 
 
 
228 aa  119  3e-26  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_2370  response regulator receiver modulated metal dependent phosphohydrolase  42.57 
 
 
370 aa  119  3.9999999999999996e-26  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_1354  two component LuxR family transcriptional regulator  45.04 
 
 
349 aa  119  3.9999999999999996e-26  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_0790  multi-sensor signal transduction histidine kinase  43.66 
 
 
566 aa  119  4.9999999999999996e-26  Cyanothece sp. PCC 7425  Bacteria  normal  0.391268  normal 
 
 
-
 
NC_007954  Sden_3723  response regulator receiver  47.79 
 
 
338 aa  119  4.9999999999999996e-26  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_2064  response regulator receiver modulated metal dependent phosphohydrolase  44.76 
 
 
395 aa  118  6e-26  Acidovorax citrulli AAC00-1  Bacteria  normal  0.18463  normal  0.544249 
 
 
-
 
NC_007912  Sde_0667  response regulator receiver domain-containing protein  44.3 
 
 
1526 aa  118  7e-26  Saccharophagus degradans 2-40  Bacteria  normal  0.0280955  hitchhiker  0.000000898802 
 
 
-
 
NC_011146  Gbem_1228  response regulator receiver modulated diguanylate cyclase  46.48 
 
 
349 aa  118  7e-26  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_2984  two component transcriptional regulator, LuxR family protein  45.67 
 
 
295 aa  118  7.999999999999999e-26  Psychromonas ingrahamii 37  Bacteria  normal  0.43543  normal  0.546259 
 
 
-
 
NC_007413  Ava_4702  response regulator receiver Signal transduction histidine kinase  42.52 
 
 
381 aa  117  9.999999999999999e-26  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0901362  normal 
 
 
-
 
NC_007947  Mfla_1761  two component LuxR family transcriptional regulator  43.85 
 
 
311 aa  117  9.999999999999999e-26  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4238  two component transcriptional regulator, LuxR family  45.04 
 
 
356 aa  117  9.999999999999999e-26  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_1083  two component LuxR family transcriptional regulator  43.94 
 
 
316 aa  117  1.9999999999999998e-25  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_005707  BCE_A0213  DNA-binding response regulator  45.11 
 
 
227 aa  117  1.9999999999999998e-25  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011777  BCAH820_B0254  DNA-binding response regulator  45.11 
 
 
227 aa  117  1.9999999999999998e-25  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000000000466037 
 
 
-
 
NC_008061  Bcen_3730  two component LuxR family transcriptional regulator  46.72 
 
 
312 aa  116  1.9999999999999998e-25  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_6548  response regulator receiver sensor signal transduction histidine kinase  42.24 
 
 
397 aa  117  1.9999999999999998e-25  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.543575 
 
 
-
 
NC_008345  Sfri_2505  response regulator receiver modulated metal dependent phosphohydrolase  50 
 
 
331 aa  117  1.9999999999999998e-25  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_4638  two component LuxR family transcriptional regulator  46.72 
 
 
312 aa  116  1.9999999999999998e-25  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_3072  response regulator receiver modulated metal dependent phosphohydrolase  42.14 
 
 
353 aa  117  1.9999999999999998e-25  Magnetococcus sp. MC-1  Bacteria  normal  hitchhiker  0.000480818 
 
 
-
 
NC_010515  Bcenmc03_5666  two component LuxR family transcriptional regulator  46.72 
 
 
312 aa  117  1.9999999999999998e-25  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.917296 
 
 
-
 
NC_009457  VC0395_A0150  sensory box sensor histidine kinase/response regulator  44.63 
 
 
1177 aa  116  3e-25  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_1086  response regulator receiver modulated metal dependent phosphohydrolase  46.67 
 
 
331 aa  116  3e-25  Marinomonas sp. MWYL1  Bacteria  normal  0.226857  hitchhiker  0.0000000112469 
 
 
-
 
NC_012560  Avin_25160  response regulator  44.36 
 
 
356 aa  116  3e-25  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_2978  response regulator receiver modulated metal dependent phosphohydrolase  40.12 
 
 
369 aa  116  3e-25  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.806511 
 
 
-
 
NC_008700  Sama_3111  response regulator receiver protein  45.93 
 
 
328 aa  116  3e-25  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.0637882 
 
 
-
 
NC_007952  Bxe_B1713  two component LuxR family transcriptional regulator  43.2 
 
 
361 aa  116  3e-25  Burkholderia xenovorans LB400  Bacteria  normal  0.310925  normal 
 
 
-
 
NC_007413  Ava_2562  response regulator receiver Signal transduction histidine kinase  42.45 
 
 
437 aa  115  3.9999999999999997e-25  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_0836  response regulator receiver protein  41.21 
 
 
395 aa  115  3.9999999999999997e-25  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_3676  response regulator receiver modulated metal dependent phosphohydrolase  48.76 
 
 
328 aa  115  5e-25  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_0719  multi-sensor signal transduction histidine kinase  51.64 
 
 
531 aa  115  6e-25  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_2150  response regulator receiver Signal transduction histidine kinase  41.01 
 
 
443 aa  115  6e-25  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.394463 
 
 
-
 
NC_009654  Mmwyl1_2382  response regulator receiver modulated metal dependent phosphohydrolase  43.4 
 
 
359 aa  115  6.9999999999999995e-25  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_3524  two component LuxR family transcriptional regulator  45.04 
 
 
353 aa  115  6.9999999999999995e-25  Acidovorax citrulli AAC00-1  Bacteria  normal  0.406085  normal  0.428998 
 
 
-
 
NC_007298  Daro_1573  response regulator receiver:ATP-binding region, ATPase-like:histidine kinase, dimerization and phosphoacceptor region  38.82 
 
 
373 aa  114  7.999999999999999e-25  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_012803  Mlut_14770  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  46.03 
 
 
226 aa  115  7.999999999999999e-25  Micrococcus luteus NCTC 2665  Bacteria  normal  0.383411  n/a   
 
 
-
 
NC_011831  Cagg_1006  response regulator receiver modulated diguanylate cyclase  45.99 
 
 
312 aa  114  8.999999999999998e-25  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_013456  VEA_002587  chitin catabolic cascade sensor histidine kinase ChiS  43.8 
 
 
1111 aa  114  1.0000000000000001e-24  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I2575  chitin degradation sensor protein  39.35 
 
 
1127 aa  114  1.0000000000000001e-24  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_0978  response regulator receiver modulated diguanylate cyclase  45.74 
 
 
322 aa  114  1.0000000000000001e-24  Psychromonas ingrahamii 37  Bacteria  normal  0.97362  decreased coverage  0.00116316 
 
 
-
 
NC_009783  VIBHAR_03422  hypothetical protein  43.8 
 
 
1128 aa  114  1.0000000000000001e-24  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007298  Daro_0007  response regulator receiver modulated metal dependent phosphohydrolase  40.54 
 
 
379 aa  114  1.0000000000000001e-24  Dechloromonas aromatica RCB  Bacteria  normal  0.829613  normal  0.0284762 
 
 
-
 
NC_007348  Reut_B4068  response regulator receiver  45.16 
 
 
377 aa  114  1.0000000000000001e-24  Ralstonia eutropha JMP134  Bacteria  normal  0.706307  n/a   
 
 
-
 
NC_007912  Sde_2977  response regulator receiver domain-containing protein  47.41 
 
 
303 aa  114  1.0000000000000001e-24  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.13601 
 
 
-
 
NC_010571  Oter_3794  response regulator receiver sensor signal transduction histidine kinase  47.06 
 
 
376 aa  114  1.0000000000000001e-24  Opitutus terrae PB90-1  Bacteria  normal  0.0277983  normal  0.543799 
 
 
-
 
NC_011884  Cyan7425_2947  multi-sensor signal transduction histidine kinase  44.54 
 
 
503 aa  114  1.0000000000000001e-24  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_1118  response regulator receiver sensor signal transduction histidine kinase  41.72 
 
 
452 aa  114  1.0000000000000001e-24  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.000972917  n/a   
 
 
-
 
NC_003910  CPS_4166  response regulator  35.8 
 
 
508 aa  114  2.0000000000000002e-24  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_1054  response regulator receiver modulated metal dependent phosphohydrolase  38.69 
 
 
359 aa  114  2.0000000000000002e-24  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0512  response regulator receiver modulated metal dependent phosphohydrolase  40.74 
 
 
368 aa  114  2.0000000000000002e-24  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00189837  n/a   
 
 
-
 
NC_011138  MADE_00878  two-component response regulator  42.34 
 
 
298 aa  113  2.0000000000000002e-24  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_2443  two component transcriptional regulator, winged helix family  46.22 
 
 
224 aa  114  2.0000000000000002e-24  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00121019 
 
 
-
 
NC_008321  Shewmr4_0792  response regulator receiver modulated metal dependent phosphohydrolase  43.38 
 
 
331 aa  113  2.0000000000000002e-24  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_2712  two component transcriptional regulator  47.06 
 
 
224 aa  113  2.0000000000000002e-24  Arthrobacter sp. FB24  Bacteria  hitchhiker  0.00552555  n/a   
 
 
-
 
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