Gene Oter_1720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_1720 
Symbol 
ID6207749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp2113072 
End bp2113977 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content68% 
IMG OID641691368 
Producttwo component LuxR family transcriptional regulator 
Protein accessionYP_001818604 
Protein GI182413538 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.162572 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.616267 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAAAA CGGTGCTCAT CATTGACGAC GTGCCGGCGA ATGTCGGCGT GCTGCTCGAC 
GTGCTGGCGG CGGCGGGTTT CGAGGTGGCG GTGGCCGAAA GCGGCCAAAG CGCGCTCGAG
CAGCTCGCGT GGTTGAAGCC CGACATCATC TTGCTGGACG TGCTCATGCC GGGACTGGAT
GGCTTCGAGA CGTGCCGGCG GCTGAAGGCG CGCGAGGCGA CGGCCGACGT GCCGGTGTTG
TTCATGACGG CGCTGACGGA AGTCGTGGAC AAAGTGAAGG GGTTCGCGGC GGGCGCGGTC
GACTATCTGG CGAAGCCGCT GCATCCCGAG GAGGTCCTCG CGCGGGTGAA CGCGCACCTG
AAGATCCGTG AGCAACAGCA GCTGCTGGAG CAGCGGGCGG ACGAACTCGA TCGCGAGGTA
CAGCGGCGGG TGTTGGCGGA ACGCGAGGTG CAACGCGTGC TCGAGCGCGG GTTGATCGTC
ATCGGTGCGA AGGACGAGAT TTTGTTCGCC AGCGACCGGG CGCGGACCTT GCTCACGCGG
CATTTCCCCG GGGTGACGGG GAGCCGCGTG GTGCTCGCGC TGCTGACGGG CGAGTTGCCG
GCTGGGTTGA AGCTGAGCGC GCCGGCGGAC CGGACGACGC GGCCGCTGGT AGTGCACCTC
GACGAAGTGC CGCGCGCGGC GAGTCCCGCG CAACTGGCGC CGCTCGGGCT CACGCCGCGC
GAGACGGAGA TTCTGTTCTG GGTGGCGCAG GGAAAGACGA ACGCGGAGAT CGGCACGATC
CTCGGGGCGG CGCCTGCGAC GGTGAAGAAA CACGTGGAAA ATCTTCTGCC GAAGCTCGGC
GTGGAAACCC GCCTCGCGGC TGCGCTGCGA GCGACGGAAC TGCTGAGTGG CGGCGCGGCC
GGCTAA
 
Protein sequence
MTKTVLIIDD VPANVGVLLD VLAAAGFEVA VAESGQSALE QLAWLKPDII LLDVLMPGLD 
GFETCRRLKA REATADVPVL FMTALTEVVD KVKGFAAGAV DYLAKPLHPE EVLARVNAHL
KIREQQQLLE QRADELDREV QRRVLAEREV QRVLERGLIV IGAKDEILFA SDRARTLLTR
HFPGVTGSRV VLALLTGELP AGLKLSAPAD RTTRPLVVHL DEVPRAASPA QLAPLGLTPR
ETEILFWVAQ GKTNAEIGTI LGAAPATVKK HVENLLPKLG VETRLAAALR ATELLSGGAA
G