Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_1720 |
Symbol | |
ID | 6207749 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 2113072 |
End bp | 2113977 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641691368 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_001818604 |
Protein GI | 182413538 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.162572 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.616267 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAAAA CGGTGCTCAT CATTGACGAC GTGCCGGCGA ATGTCGGCGT GCTGCTCGAC GTGCTGGCGG CGGCGGGTTT CGAGGTGGCG GTGGCCGAAA GCGGCCAAAG CGCGCTCGAG CAGCTCGCGT GGTTGAAGCC CGACATCATC TTGCTGGACG TGCTCATGCC GGGACTGGAT GGCTTCGAGA CGTGCCGGCG GCTGAAGGCG CGCGAGGCGA CGGCCGACGT GCCGGTGTTG TTCATGACGG CGCTGACGGA AGTCGTGGAC AAAGTGAAGG GGTTCGCGGC GGGCGCGGTC GACTATCTGG CGAAGCCGCT GCATCCCGAG GAGGTCCTCG CGCGGGTGAA CGCGCACCTG AAGATCCGTG AGCAACAGCA GCTGCTGGAG CAGCGGGCGG ACGAACTCGA TCGCGAGGTA CAGCGGCGGG TGTTGGCGGA ACGCGAGGTG CAACGCGTGC TCGAGCGCGG GTTGATCGTC ATCGGTGCGA AGGACGAGAT TTTGTTCGCC AGCGACCGGG CGCGGACCTT GCTCACGCGG CATTTCCCCG GGGTGACGGG GAGCCGCGTG GTGCTCGCGC TGCTGACGGG CGAGTTGCCG GCTGGGTTGA AGCTGAGCGC GCCGGCGGAC CGGACGACGC GGCCGCTGGT AGTGCACCTC GACGAAGTGC CGCGCGCGGC GAGTCCCGCG CAACTGGCGC CGCTCGGGCT CACGCCGCGC GAGACGGAGA TTCTGTTCTG GGTGGCGCAG GGAAAGACGA ACGCGGAGAT CGGCACGATC CTCGGGGCGG CGCCTGCGAC GGTGAAGAAA CACGTGGAAA ATCTTCTGCC GAAGCTCGGC GTGGAAACCC GCCTCGCGGC TGCGCTGCGA GCGACGGAAC TGCTGAGTGG CGGCGCGGCC GGCTAA
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Protein sequence | MTKTVLIIDD VPANVGVLLD VLAAAGFEVA VAESGQSALE QLAWLKPDII LLDVLMPGLD GFETCRRLKA REATADVPVL FMTALTEVVD KVKGFAAGAV DYLAKPLHPE EVLARVNAHL KIREQQQLLE QRADELDREV QRRVLAEREV QRVLERGLIV IGAKDEILFA SDRARTLLTR HFPGVTGSRV VLALLTGELP AGLKLSAPAD RTTRPLVVHL DEVPRAASPA QLAPLGLTPR ETEILFWVAQ GKTNAEIGTI LGAAPATVKK HVENLLPKLG VETRLAAALR ATELLSGGAA G
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