Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_1354 |
Symbol | |
ID | 4011965 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 1393767 |
End bp | 1394816 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637941034 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_548201 |
Protein GI | 91787249 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2771] DNA-binding HTH domain-containing proteins [COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCAGCG TGCTTGATTC CACCCGCGCT ATGGACCGCA AGCTGGACCA CACCCTGGAC CGCGCCAACA GTGACGTGGT GCTGATCGTG GACGACGTGC CGGACAACCT CTCGGTGCTG CATGATGCGC TCGATGAGTC GGGTTACACC GTGCTGGTCG CCACCAGCGG CGAAGCCGCC CTGAACCGGG CCCGGCAGGC CGTGCCGGAC ATCGTGCTGC TCGACGCCAT GATGCCTGGC ATGGACGGCT TCGAGGTGGC CAAACGCCTG AAAGCCATGG CCGAGACGGC GCACATTCCC ATCATCTTCA TGACCGGGCT GACCGAGACC GAGCATCTGG TCGCTGCGCT GGAGGCAGGC GGCGTCGATT ACGTGACCAA GCCGATCAAG CCCAAGGAGG TCATGGCGCG CATGGGGGTG CACCTGCAGG GCGCTCGCCG TGCCCGGCAG GAGGCCCGGC AGGCGGGCCA GGCGCGCAAT GCGCTGGATG CGTTCGGCTA TGCCAGCATC ACGGTGCGCA TGGGCGGGCC GGGCGACGGC AGGCTGATCT GGCAGACCCC GCTGGCGCGC GACCTGCTGA TGCGCTACTA CGGCACGTCG GCCCCGCAAA CCCCCGAACC GGTGCTGAAC TGGCTGCGCC GCCACCAGGC CGAGGCCGGG CGCGAGCACG AGCTTGAACC GCCGCGCCTG GCCATGGAAC TGGGCCCGCG CCGCCTGACG TTCCGGCTGC ACCGGCACAC CGGGGACGCG GGAGGAGACG GTGAGGGCGC GAGCGACTGG CTGATCGTGA TGCGCGAGAT CTCCGACGAT GCGGTGATCG AGGCCATGAG CCTGAGCTTC AAGCTCACGG CCCGCGAGGC CGAGGTGCTC TACTGGGTGA TCAAGGGCAA GATCAACCGC GACATCGCCG GCATTCTGGG TGCCAGTCCG GCCACGGTCA AAAAGCATCT GGAGCATGTG TACGCCAAGC TGGGCGTGGA AACCCGCACG GCCGCCGCCG GCATGGCGCT GAACCGCATC CGGCAGCTTC ATCCGCAGTT TGAGGCCTGA
|
Protein sequence | MSSVLDSTRA MDRKLDHTLD RANSDVVLIV DDVPDNLSVL HDALDESGYT VLVATSGEAA LNRARQAVPD IVLLDAMMPG MDGFEVAKRL KAMAETAHIP IIFMTGLTET EHLVAALEAG GVDYVTKPIK PKEVMARMGV HLQGARRARQ EARQAGQARN ALDAFGYASI TVRMGGPGDG RLIWQTPLAR DLLMRYYGTS APQTPEPVLN WLRRHQAEAG REHELEPPRL AMELGPRRLT FRLHRHTGDA GGDGEGASDW LIVMREISDD AVIEAMSLSF KLTAREAEVL YWVIKGKINR DIAGILGASP ATVKKHLEHV YAKLGVETRT AAAGMALNRI RQLHPQFEA
|
| |