More than 300 homologs were found in PanDaTox collection
for query gene Bxe_B1713 on replicon NC_007952
Organism: Burkholderia xenovorans LB400



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007952  Bxe_B1713  two component LuxR family transcriptional regulator  100 
 
 
361 aa  728    Burkholderia xenovorans LB400  Bacteria  normal  0.310925  normal 
 
 
-
 
NC_010515  Bcenmc03_5666  two component LuxR family transcriptional regulator  56.44 
 
 
312 aa  344  1e-93  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.917296 
 
 
-
 
NC_008061  Bcen_3730  two component LuxR family transcriptional regulator  55.52 
 
 
312 aa  341  1e-92  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_4638  two component LuxR family transcriptional regulator  55.52 
 
 
312 aa  341  1e-92  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A0671  two component LuxR family transcriptional regulator  44.51 
 
 
333 aa  265  5.999999999999999e-70  Methylibium petroleiphilum PM1  Bacteria  normal  0.0205263  normal 
 
 
-
 
NC_007947  Mfla_1761  two component LuxR family transcriptional regulator  46.01 
 
 
311 aa  259  4e-68  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_3397  two component LuxR family transcriptional regulator  43.32 
 
 
328 aa  244  1.9999999999999999e-63  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_3524  two component LuxR family transcriptional regulator  44.6 
 
 
353 aa  243  3e-63  Acidovorax citrulli AAC00-1  Bacteria  normal  0.406085  normal  0.428998 
 
 
-
 
NC_008825  Mpe_A3585  two component LuxR family transcriptional regulator  41.57 
 
 
306 aa  243  3e-63  Methylibium petroleiphilum PM1  Bacteria  normal  0.295986  normal 
 
 
-
 
NC_008781  Pnap_0979  response regulator receiver protein  42.25 
 
 
336 aa  241  1e-62  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_1083  two component LuxR family transcriptional regulator  44.08 
 
 
316 aa  241  2e-62  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_007298  Daro_1445  two component LuxR family transcriptional regulator  44.64 
 
 
308 aa  239  5e-62  Dechloromonas aromatica RCB  Bacteria  normal  0.446624  normal 
 
 
-
 
NC_012791  Vapar_4238  two component transcriptional regulator, LuxR family  41.45 
 
 
356 aa  239  6.999999999999999e-62  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_0562  two component LuxR family transcriptional regulator  40.83 
 
 
297 aa  231  1e-59  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_1731  response regulator receiver protein  41.97 
 
 
361 aa  229  7e-59  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.319975 
 
 
-
 
NC_010002  Daci_0218  two component LuxR family transcriptional regulator  40.59 
 
 
339 aa  228  1e-58  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_1354  two component LuxR family transcriptional regulator  41.85 
 
 
349 aa  224  2e-57  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_0652  two component LuxR family transcriptional regulator  38.35 
 
 
305 aa  223  3e-57  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0800453  normal  0.813173 
 
 
-
 
NC_007912  Sde_2977  response regulator receiver domain-containing protein  36.36 
 
 
303 aa  222  7e-57  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.13601 
 
 
-
 
NC_013422  Hneap_1587  two component transcriptional regulator, LuxR family  40.48 
 
 
292 aa  222  8e-57  Halothiobacillus neapolitanus c2  Bacteria  normal  0.522901  n/a   
 
 
-
 
NC_007958  RPD_3866  response regulator receiver  40.12 
 
 
309 aa  221  9.999999999999999e-57  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.370865  normal 
 
 
-
 
NC_010581  Bind_0974  two component LuxR family transcriptional regulator  38.26 
 
 
309 aa  221  9.999999999999999e-57  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.883175  normal  0.426964 
 
 
-
 
NC_010725  Mpop_3574  two component transcriptional regulator, LuxR family  40.3 
 
 
301 aa  219  5e-56  Methylobacterium populi BJ001  Bacteria  normal  0.0249095  normal 
 
 
-
 
NC_007778  RPB_1250  two component LuxR family transcriptional regulator  39.76 
 
 
309 aa  215  9.999999999999999e-55  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.886948  normal 
 
 
-
 
NC_011989  Avi_3499  transcriptional regulator LuxR family  40.06 
 
 
312 aa  214  1.9999999999999998e-54  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_3692  two component transcriptional regulator, LuxR family  39.08 
 
 
300 aa  214  1.9999999999999998e-54  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.170876  normal 
 
 
-
 
NC_011666  Msil_2002  two component transcriptional regulator, LuxR family  39.88 
 
 
306 aa  214  1.9999999999999998e-54  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_010172  Mext_3383  response regulator receiver  39.48 
 
 
300 aa  214  1.9999999999999998e-54  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_009620  Smed_4179  response regulator receiver protein  35.76 
 
 
309 aa  213  3.9999999999999995e-54  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.15819 
 
 
-
 
NC_010505  Mrad2831_5514  two component LuxR family transcriptional regulator  39.19 
 
 
305 aa  213  3.9999999999999995e-54  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.211273 
 
 
-
 
NC_008740  Maqu_3869  response regulator receiver protein  38.37 
 
 
301 aa  212  9e-54  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_1441  two component transcriptional regulator, LuxR family  39.41 
 
 
308 aa  211  1e-53  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0962  response regulator receiver protein  37.31 
 
 
304 aa  207  2e-52  Marinomonas sp. MWYL1  Bacteria  normal  0.512477  normal 
 
 
-
 
NC_011369  Rleg2_3066  two component transcriptional regulator, LuxR family  38.48 
 
 
305 aa  206  4e-52  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_3321  two component transcriptional regulator, LuxR family  36.26 
 
 
305 aa  202  7e-51  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.536368 
 
 
-
 
NC_010571  Oter_1720  two component LuxR family transcriptional regulator  40.61 
 
 
301 aa  184  2.0000000000000003e-45  Opitutus terrae PB90-1  Bacteria  normal  0.162572  normal  0.616267 
 
 
-
 
NC_007794  Saro_1665  two component LuxR family transcriptional regulator  37.16 
 
 
307 aa  184  2.0000000000000003e-45  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_00878  two-component response regulator  34.33 
 
 
298 aa  177  3e-43  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_4080  DNA-binding response regulator, LuxR family  62.6 
 
 
222 aa  175  9.999999999999999e-43  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.542388  n/a   
 
 
-
 
NC_012791  Vapar_3147  two component transcriptional regulator, LuxR family  50.3 
 
 
302 aa  175  9.999999999999999e-43  Variovorax paradoxus S110  Bacteria  normal  0.235206  n/a   
 
 
-
 
NC_010511  M446_0591  two component LuxR family transcriptional regulator  47.02 
 
 
301 aa  157  3e-37  Methylobacterium sp. 4-46  Bacteria  normal  0.477799  hitchhiker  0.00469436 
 
 
-
 
NC_010551  BamMC406_1236  response regulator receiver sensor signal transduction histidine kinase  50 
 
 
386 aa  145  8.000000000000001e-34  Burkholderia ambifaria MC40-6  Bacteria  normal  0.493129  normal 
 
 
-
 
NC_010623  Bphy_4530  response regulator receiver sensor signal transduction histidine kinase  49.35 
 
 
386 aa  144  2e-33  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_6236  multi-sensor signal transduction histidine kinase  50 
 
 
553 aa  144  3e-33  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.914679 
 
 
-
 
NC_007413  Ava_2149  response regulator receiver Signal transduction histidine kinase  45.21 
 
 
407 aa  143  4e-33  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.142048 
 
 
-
 
NC_010625  Bphy_6559  multi-sensor signal transduction histidine kinase  57.26 
 
 
541 aa  143  4e-33  Burkholderia phymatum STM815  Bacteria  normal  normal  0.59439 
 
 
-
 
NC_008709  Ping_2984  two component transcriptional regulator, LuxR family protein  47.3 
 
 
295 aa  143  4e-33  Psychromonas ingrahamii 37  Bacteria  normal  0.43543  normal  0.546259 
 
 
-
 
NC_011884  Cyan7425_0790  multi-sensor signal transduction histidine kinase  54.62 
 
 
566 aa  143  5e-33  Cyanothece sp. PCC 7425  Bacteria  normal  0.391268  normal 
 
 
-
 
NC_010627  Bphy_7700  multi-sensor signal transduction histidine kinase  55.65 
 
 
541 aa  142  6e-33  Burkholderia phymatum STM815  Bacteria  normal  0.163324  normal  0.507763 
 
 
-
 
NC_013440  Hoch_6548  response regulator receiver sensor signal transduction histidine kinase  48.7 
 
 
397 aa  142  9.999999999999999e-33  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.543575 
 
 
-
 
NC_007413  Ava_2562  response regulator receiver Signal transduction histidine kinase  47.06 
 
 
437 aa  140  3e-32  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_2507  two component, sigma54 specific, transcriptional regulator, Fis family  43.33 
 
 
488 aa  140  4.999999999999999e-32  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.182398 
 
 
-
 
NC_009767  Rcas_3134  response regulator receiver protein  45.96 
 
 
200 aa  139  7.999999999999999e-32  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_3210  response regulator receiver modulated diguanylate cyclase  52.03 
 
 
337 aa  138  1e-31  Cyanothece sp. PCC 7425  Bacteria  normal  0.32327  normal  0.712325 
 
 
-
 
NC_013440  Hoch_2175  response regulator receiver sensor signal transduction histidine kinase  53.28 
 
 
395 aa  138  2e-31  Haliangium ochraceum DSM 14365  Bacteria  normal  0.924768  normal  0.400775 
 
 
-
 
NC_014248  Aazo_4465  response regulator receiver sensor signal transduction histidine kinase  47.79 
 
 
437 aa  138  2e-31  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_2347  response regulator receiver protein  51.97 
 
 
202 aa  136  6.0000000000000005e-31  Roseiflexus sp. RS-1  Bacteria  normal  0.56815  normal 
 
 
-
 
NC_010814  Glov_1118  response regulator receiver sensor signal transduction histidine kinase  41.82 
 
 
452 aa  136  6.0000000000000005e-31  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.000972917  n/a   
 
 
-
 
NC_012918  GM21_3242  response regulator receiver sensor signal transduction histidine kinase  43.21 
 
 
441 aa  136  7.000000000000001e-31  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_010571  Oter_0809  response regulator receiver sensor signal transduction histidine kinase  48.85 
 
 
367 aa  135  9.999999999999999e-31  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_2150  response regulator receiver Signal transduction histidine kinase  42.68 
 
 
443 aa  134  3e-30  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.394463 
 
 
-
 
NC_007413  Ava_4136  response regulator receiver Signal transduction histidine kinase  48.36 
 
 
440 aa  131  1.0000000000000001e-29  Anabaena variabilis ATCC 29413  Bacteria  decreased coverage  0.00000660181  hitchhiker  0.00876613 
 
 
-
 
NC_011146  Gbem_1018  response regulator receiver sensor signal transduction histidine kinase  40.12 
 
 
441 aa  132  1.0000000000000001e-29  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.00729938  n/a   
 
 
-
 
NC_014248  Aazo_4229  response regulator receiver sensor signal transduction histidine kinase  48.8 
 
 
383 aa  130  4.0000000000000003e-29  'Nostoc azollae' 0708  Bacteria  normal  0.599633  n/a   
 
 
-
 
NC_011726  PCC8801_1350  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  47.48 
 
 
715 aa  129  6e-29  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_1380  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  47.48 
 
 
715 aa  129  8.000000000000001e-29  Cyanothece sp. PCC 8802  Bacteria  normal  0.923401  normal 
 
 
-
 
NC_010681  Bphyt_2397  two component transcriptional regulator, AraC family  46.21 
 
 
269 aa  128  1.0000000000000001e-28  Burkholderia phytofirmans PsJN  Bacteria  normal  0.92999  normal  0.351016 
 
 
-
 
NC_008312  Tery_4155  response regulator receiver sensor signal transduction histidine kinase  43.26 
 
 
440 aa  128  2.0000000000000002e-28  Trichodesmium erythraeum IMS101  Bacteria  normal  0.50715  normal 
 
 
-
 
NC_011726  PCC8801_2743  response regulator receiver sensor signal transduction histidine kinase  47.66 
 
 
395 aa  127  4.0000000000000003e-28  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_3359  response regulator receiver sensor signal transduction histidine kinase  47.66 
 
 
395 aa  127  4.0000000000000003e-28  Cyanothece sp. PCC 8802  Bacteria  normal  0.361398  normal 
 
 
-
 
NC_009901  Spea_0629  response regulator receiver modulated metal dependent phosphohydrolase  46.03 
 
 
339 aa  125  1e-27  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_3199  response regulator receiver modulated metal dependent phosphohydrolase  46.83 
 
 
339 aa  124  2e-27  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_3408  response regulator receiver modulated metal dependent phosphohydrolase  44.12 
 
 
346 aa  124  3e-27  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_3504  response regulator receiver modulated metal dependent phosphohydrolase  43.28 
 
 
338 aa  123  5e-27  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_0836  response regulator receiver modulated metal dependent phosphohydrolase  43.28 
 
 
338 aa  123  5e-27  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0859  response regulator receiver modulated metal dependent phosphohydrolase  43.28 
 
 
338 aa  123  5e-27  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_0871  response regulator receiver modulated metal dependent phosphohydrolase  43.28 
 
 
338 aa  123  5e-27  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_2188  response regulator receiver sensor signal transduction histidine kinase  42.75 
 
 
384 aa  123  6e-27  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.00677544 
 
 
-
 
NC_009654  Mmwyl1_2382  response regulator receiver modulated metal dependent phosphohydrolase  43.85 
 
 
359 aa  123  6e-27  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_1139  response regulator receiver modulated diguanylate cyclase  40.8 
 
 
308 aa  122  9.999999999999999e-27  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_1169  response regulator receiver modulated diguanylate cyclase  40.8 
 
 
308 aa  122  9.999999999999999e-27  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011312  VSAL_I2575  chitin degradation sensor protein  42.54 
 
 
1127 aa  121  1.9999999999999998e-26  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B4068  response regulator receiver  49.19 
 
 
377 aa  120  3e-26  Ralstonia eutropha JMP134  Bacteria  normal  0.706307  n/a   
 
 
-
 
NC_008321  Shewmr4_0716  response regulator receiver modulated metal dependent phosphohydrolase  44.44 
 
 
338 aa  119  6e-26  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3306  response regulator receiver modulated metal dependent phosphohydrolase  44.44 
 
 
338 aa  119  6e-26  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3418  response regulator receiver modulated metal dependent phosphohydrolase  44.44 
 
 
338 aa  119  6e-26  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_3141  response regulator receiver modulated metal dependent phosphohydrolase  44.44 
 
 
338 aa  119  7e-26  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_1573  response regulator receiver:ATP-binding region, ATPase-like:histidine kinase, dimerization and phosphoacceptor region  32.09 
 
 
373 aa  119  9.999999999999999e-26  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_010557  BamMC406_6071  two component AraC family transcriptional regulator  45.45 
 
 
271 aa  119  9.999999999999999e-26  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_008392  Bamb_6368  two component AraC family transcriptional regulator  45.45 
 
 
271 aa  118  9.999999999999999e-26  Burkholderia ambifaria AMMD  Bacteria  normal  0.434467  normal 
 
 
-
 
NC_008700  Sama_2951  response regulator receiver protein  45.24 
 
 
340 aa  118  9.999999999999999e-26  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.129077 
 
 
-
 
NC_004347  SO_0860  response regulator  43.65 
 
 
339 aa  118  1.9999999999999998e-25  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011726  PCC8801_2041  response regulator receiver modulated diguanylate cyclase  44.8 
 
 
317 aa  117  1.9999999999999998e-25  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011729  PCC7424_0984  response regulator receiver modulated diguanylate cyclase  44.62 
 
 
353 aa  118  1.9999999999999998e-25  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.194443 
 
 
-
 
NC_011992  Dtpsy_0962  response regulator receiver modulated metal dependent phosphohydrolase  48.44 
 
 
377 aa  118  1.9999999999999998e-25  Acidovorax ebreus TPSY  Bacteria  normal  0.115091  n/a   
 
 
-
 
NC_008782  Ajs_1044  response regulator receiver modulated metal dependent phosphohydrolase  48.44 
 
 
377 aa  118  1.9999999999999998e-25  Acidovorax sp. JS42  Bacteria  normal  normal  0.0516082 
 
 
-
 
NC_013161  Cyan8802_2067  response regulator receiver modulated diguanylate cyclase  44.8 
 
 
317 aa  117  1.9999999999999998e-25  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_010512  Bcenmc03_6350  two component AraC family transcriptional regulator  44 
 
 
271 aa  117  3e-25  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.787195  normal  0.900493 
 
 
-
 
NC_008062  Bcen_6528  two component AraC family transcriptional regulator  44 
 
 
271 aa  117  3e-25  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.485144  n/a   
 
 
-
 
NC_010571  Oter_3794  response regulator receiver sensor signal transduction histidine kinase  35.64 
 
 
376 aa  117  3e-25  Opitutus terrae PB90-1  Bacteria  normal  0.0277983  normal  0.543799 
 
 
-
 
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