| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0978 |
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| Symbol | |
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| ID | 4626532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 1228926 |
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| End bp | 1229894 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 639796195 |
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| Product | response regulator receiver modulated diguanylate cyclase |
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| Protein accession | YP_942417 |
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| Protein GI | 119944737 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.97362 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00116316 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCCTGAGA AAGTAAAACA AAAAGTATTA ATTGTCGATG ATATCAAAGA TAATATTAAG
GTATTAATCG ATCTGCTGAA ACCAGAATAT AAAACATTTT TTGCGACTAA TGGTGAAAAA
GCCCTTGAAT TAGCTCAAAA TATGTCCCCT GATATTATCT TACTGGATAT TGTAATGCCA
GAAATGGATG GCTTTGAAGT ATGCCAGAAA TTGAAATCTA ACCCCATCAC CTGCGATATT
CCTGTTATCT TCATATCGGC AATGAGCGAT ATTGGGGATG AAACAAAGGG CTTAGAAGTC
GGTGCGGTGG ATTACATTAC CAAGCCAATT AGTCCGGCGA TCGTTAAAGC CAGGGTGAAA
AATCATTTAA AACTTCAGGA AGCCATGCAG GAACTGAAAC GACTATACAA CACAGCACTT
GATTCCAATC CCAATACCGG TCTTCCTGGT AATAACAGTG TTGCAAAACA GATTAAAAGT
GCATTGGATA CCCAAGAAAA TTTGTGCGTT ATTTATTCTG ATTTGGACAA TTTTAAAGCA
TTCAATGATA AATATGGCTT TGCTTTGGGG GATGAAGTTA TCAAGTTTAC CTGCCAGGTA
TTTCAAGATG TTATCGGTGA GCTAAATATC AAGGATGCAT TTATCGGTCA TATTGGGGGG
GACGACTTTG TTCTGATTGT GCCGTCTGAC CTGACTCAAA CAGTTGCTGA AAAAATCATT
CAACGGTTCG ATCATGGTGT TATTAAGTTT TATTCCAGCA AAGATGCAGA AATCAAGTGT
ATCCAGTCTG TTGACCGCCA AGGTGAAAGC CAGATCTTCC CGATAATGTC AATCAGTTTG
GCAGGTGTTG ATTTGGCACA TGGCATCTAC AAGGAGTACA TGGAAGTGAA TGATGTCTGT
GCGACCACCA AAAAAATAGC GAAATCAATG CCAGGGAGTA GCTTTTTTTT AAACAGACGA
GATAAATGA
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| Protein sequence | MPEKVKQKVL IVDDIKDNIK VLIDLLKPEY KTFFATNGEK ALELAQNMSP DIILLDIVMP
EMDGFEVCQK LKSNPITCDI PVIFISAMSD IGDETKGLEV GAVDYITKPI SPAIVKARVK
NHLKLQEAMQ ELKRLYNTAL DSNPNTGLPG NNSVAKQIKS ALDTQENLCV IYSDLDNFKA
FNDKYGFALG DEVIKFTCQV FQDVIGELNI KDAFIGHIGG DDFVLIVPSD LTQTVAEKII
QRFDHGVIKF YSSKDAEIKC IQSVDRQGES QIFPIMSISL AGVDLAHGIY KEYMEVNDVC
ATTKKIAKSM PGSSFFLNRR DK
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