Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MADE_00878 |
Symbol | |
ID | 6778671 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alteromonas macleodii 'Deep ecotype' |
Kingdom | Bacteria |
Replicon accession | NC_011138 |
Strand | - |
Start bp | 925029 |
End bp | 925925 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 642754310 |
Product | two-component response regulator |
Protein accession | YP_002125186 |
Protein GI | 196155697 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAATA TCAGTGATGT CGTGCTAGTT GTCGATGACT CCCCCGAGTC TTTGGGGATG CTAAATGTTG CGTTAAATAC CCAAGGCTTT ACTGCTCTGG TAGCGTTAAA TGGAGTACAA GCATTAGCCA TTGTAGAGAA AGTAAAACCT GATGTAATAC TTTTGGATGC CGTTATGCCC GAGATGGACG GCTTTGAAAC CTGCAAGAAG CTGAAAGAAG CACTCCCCAA TACACCTATA ATTTTTATGA CAGGCCTTAC CGAAATCGAT GATGTGGTTA AAGGTTTCGA CGCTGGCGGT ATCGATTACG TAACAAAGCC CATTGCCCCC GATGAGGTCA TCGCTCGAAT TAAAACTCAT ATTCAAACTG CAAAGATAGC CTTGAGCGCC CAAAGTGCAC TAGATAGCAC AGGTAGTAAC ACTTTTTGTG TAAGCTCAGA AGGCCGGTTA TCCTGGGCTA CGCCTAACGT TCATCAATTT ATCGAAAAGA TATGTGGTGA GGATACTAGC CCTTGGGCAA GCATTTCGAA AGAACTGGCT CCATGGCTTC AAAGTGAAAA TTTAGAAGAA TCGTCGATAT TAACAATACA TAGTTTCTCA TCGCCACTGC AAATAAAGTA TCTAGGTGTA CAAGCACCGC ACCATCTATT TAAAATAGTA GAGCCACCCA CCAGTAAAAC CCACCTTTGC TTGCAGGAAA AGTTACCGAT TACTAAGCGA GAGTCTGAAG TGCTGTATTG GATTTCTTTT GGTAAAACGA GTTGGGAAAT ATCTCAAATT CTCGACATGA GCCCACGTAC CGCAAATAAA CACCTTGAGC AGATTTATAA AAAGCTGGGC GTTGATAACA AAACATCGGC CGCAGCAATC GCGCTTAGGC TACTAGAGCG TTCGTGA
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Protein sequence | MNNISDVVLV VDDSPESLGM LNVALNTQGF TALVALNGVQ ALAIVEKVKP DVILLDAVMP EMDGFETCKK LKEALPNTPI IFMTGLTEID DVVKGFDAGG IDYVTKPIAP DEVIARIKTH IQTAKIALSA QSALDSTGSN TFCVSSEGRL SWATPNVHQF IEKICGEDTS PWASISKELA PWLQSENLEE SSILTIHSFS SPLQIKYLGV QAPHHLFKIV EPPTSKTHLC LQEKLPITKR ESEVLYWISF GKTSWEISQI LDMSPRTANK HLEQIYKKLG VDNKTSAAAI ALRLLERS
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