Gene MADE_00878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMADE_00878 
Symbol 
ID6778671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlteromonas macleodii 'Deep ecotype' 
KingdomBacteria 
Replicon accessionNC_011138 
Strand
Start bp925029 
End bp925925 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content43% 
IMG OID642754310 
Producttwo-component response regulator 
Protein accessionYP_002125186 
Protein GI196155697 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAATA TCAGTGATGT CGTGCTAGTT GTCGATGACT CCCCCGAGTC TTTGGGGATG 
CTAAATGTTG CGTTAAATAC CCAAGGCTTT ACTGCTCTGG TAGCGTTAAA TGGAGTACAA
GCATTAGCCA TTGTAGAGAA AGTAAAACCT GATGTAATAC TTTTGGATGC CGTTATGCCC
GAGATGGACG GCTTTGAAAC CTGCAAGAAG CTGAAAGAAG CACTCCCCAA TACACCTATA
ATTTTTATGA CAGGCCTTAC CGAAATCGAT GATGTGGTTA AAGGTTTCGA CGCTGGCGGT
ATCGATTACG TAACAAAGCC CATTGCCCCC GATGAGGTCA TCGCTCGAAT TAAAACTCAT
ATTCAAACTG CAAAGATAGC CTTGAGCGCC CAAAGTGCAC TAGATAGCAC AGGTAGTAAC
ACTTTTTGTG TAAGCTCAGA AGGCCGGTTA TCCTGGGCTA CGCCTAACGT TCATCAATTT
ATCGAAAAGA TATGTGGTGA GGATACTAGC CCTTGGGCAA GCATTTCGAA AGAACTGGCT
CCATGGCTTC AAAGTGAAAA TTTAGAAGAA TCGTCGATAT TAACAATACA TAGTTTCTCA
TCGCCACTGC AAATAAAGTA TCTAGGTGTA CAAGCACCGC ACCATCTATT TAAAATAGTA
GAGCCACCCA CCAGTAAAAC CCACCTTTGC TTGCAGGAAA AGTTACCGAT TACTAAGCGA
GAGTCTGAAG TGCTGTATTG GATTTCTTTT GGTAAAACGA GTTGGGAAAT ATCTCAAATT
CTCGACATGA GCCCACGTAC CGCAAATAAA CACCTTGAGC AGATTTATAA AAAGCTGGGC
GTTGATAACA AAACATCGGC CGCAGCAATC GCGCTTAGGC TACTAGAGCG TTCGTGA
 
Protein sequence
MNNISDVVLV VDDSPESLGM LNVALNTQGF TALVALNGVQ ALAIVEKVKP DVILLDAVMP 
EMDGFETCKK LKEALPNTPI IFMTGLTEID DVVKGFDAGG IDYVTKPIAP DEVIARIKTH
IQTAKIALSA QSALDSTGSN TFCVSSEGRL SWATPNVHQF IEKICGEDTS PWASISKELA
PWLQSENLEE SSILTIHSFS SPLQIKYLGV QAPHHLFKIV EPPTSKTHLC LQEKLPITKR
ESEVLYWISF GKTSWEISQI LDMSPRTANK HLEQIYKKLG VDNKTSAAAI ALRLLERS