Gene Bcenmc03_5666 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_5666 
Symbol 
ID6128471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010515 
Strand
Start bp2816668 
End bp2817606 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content66% 
IMG OID641652751 
Producttwo component LuxR family transcriptional regulator 
Protein accessionYP_001779278 
Protein GI170738018 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.917296 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCTGA TCGTCGACGA CACGCCGGAG AACCTCGCCT TTCTTTCCGA CACGCTGCAG 
GCGCACGGCT ACGTGGTGAT CGTCGCGCTG TCCGGCGAGG ACGCGCTCAA ACGCCTCGCG
CGCGTGACGC CCGATGTAGT GTTGCTCGAC GCGATGATGC CCGACATGGA CGGCTTCGAA
ACATGCGTGC GGATCAAGCA GGATGGACGC CACGAGCATC TGCCCGTCAT CTTCATGACT
GCGTTGACGG AGAGCGAACA TGTCGTACGC GGCTTTCGTG TAGGCGGCAT CGATTACGTG
ACCAAGCCGG TGCAGCCCGA GGAATTGTGC GCGCGCATCG GTGCCCACGT GCGGCGTTCA
CGTGCCCAGT TGTACGCGGA GGCCGCCCTG TCGCTCGACA CGCGCGCGGC GCTGATCGTC
GGCGCGGACG GCACGATTCG GTGGCAGAGC CCGCAGGCTG CACGTCATAT CGCTGCATAC
ACGACCGCGC ATGACGCCCC CGCCGATGCC CGGCCAACCA CGAACGCACG CGATACCGAT
ACGCCGACGC AGCTGCCCGC GCTACTGCGC ACGTGGTTCG TCGACTGGCT CGCGCGCGGC
GCCCCAGGCG ACGCCGTGCA CGAATTCAGT TCGGGCCCGA TCCGCCGCTC GGCCAGCGCG
ACGCGCGGCC CGGAACCGGG CGAATGGATC GTCATCCTCA AGGAAAGAGA CGACACCGCG
CATTGCAATG CACTCGCCGA ACGCTTCGGC TTGACCATGC GGGAGGCCGA AGTGCTGCTC
TGGGTGTCGC ACGGCAAAAC GAACCGCGAT ATCGGCGACA TTCTGGGCAT CGCCGCGCGC
ACGGTGAACA AGCATCTCGA ACACCTGTTC CGCAAGCTCC ATGTCGAGAC CCGTGCGGGC
GCGGCCGCCG CGGCGATCAA GATGCTCGAG CGCACGTGA
 
Protein sequence
MILIVDDTPE NLAFLSDTLQ AHGYVVIVAL SGEDALKRLA RVTPDVVLLD AMMPDMDGFE 
TCVRIKQDGR HEHLPVIFMT ALTESEHVVR GFRVGGIDYV TKPVQPEELC ARIGAHVRRS
RAQLYAEAAL SLDTRAALIV GADGTIRWQS PQAARHIAAY TTAHDAPADA RPTTNARDTD
TPTQLPALLR TWFVDWLARG APGDAVHEFS SGPIRRSASA TRGPEPGEWI VILKERDDTA
HCNALAERFG LTMREAEVLL WVSHGKTNRD IGDILGIAAR TVNKHLEHLF RKLHVETRAG
AAAAAIKMLE RT