| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_3730 |
|---|
| Symbol | |
|---|
| ID | 4095058 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008061 |
|---|
| Strand | - |
|---|
| Start bp | 863113 |
|---|
| End bp | 864051 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638017027 |
|---|
| Product | two component LuxR family transcriptional regulator |
|---|
| Protein accession | YP_623595 |
|---|
| Protein GI | 107026084 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCCTGA TCGTCGACGA CACGCCGGAG AACCTCGCCT TTCTTTCCGA CACGCTGCAG
GCGCACGGCT ACGTGGTGAT CGTCGCGCTG TCCGGCGAGG ATGCGCTCAA ACGCCTCGCG
CGCGTGACAC CCGACGTGGT GTTGCTCGAC GCGATGATGC CCGACATGGA CGGCTTCGAA
ACATGCGTGC GGATCAAGCA GGATGGACGC CACGAGCATC TGCCCGTCAT CTTCATGACT
GCGTTGACGG AGAGCGAACA TGTCGTACGC GGCTTTCGTG TAGGCGGCAT CGATTACGTG
ACCAAGCCGG TGCAGCCCGA GGAATTGTGC GCACGCATCG GCGCCCATGT ACGGCGTTCA
CGTGCGCAGT TGTACGCGGA GGCGGCACTG TCGCTCGACA CGCGCGCGGC GCTGATCGTC
GGCGCGGACG GCACGATTCG GTGGCAGAGC CCGCAGGCTG CGCGTCATAT CGCTGCATAC
ACGACCGCGC ATGACGCCCC CGCCGATGCC CGGCAACCCA CGACCGCACG CGATACCGAC
GCGCCGACGC AGCTGCCCGC GCTACTGCGC ACGTGGTTCG TCGACTGGCT CGCGCGCGGC
GCCCCGGGCG ACGCCGTGCA CGAATTCAGC TCGGGCCCGA TACGCCGCTC GGCCAGCGCG
ACGCGCGGCC CGGAACCGGG CGAATGGATC GTGATCCTCA AGGAAAGAGA CGACACCGTG
CATTGCAATG CACTCGCCGA ACGCTTCGGC TTGACCATGC GGGAGGCCGA AGTGCTGCTC
TGGGTGTCGC ACGGCAAGAC GAACCGCGAT ATCGGCGACA TTCTGGGCAT CGCCGCGCGC
ACGGTGAACA AGCATCTCGA ACACCTGTTC CGCAAGCTCC ATGTCGAGAC CCGTGCGGGC
GCGGCCGCCG CGGCGATCAA GATGCTCGAG CGCACGTGA
|
|---|
| Protein sequence | MILIVDDTPE NLAFLSDTLQ AHGYVVIVAL SGEDALKRLA RVTPDVVLLD AMMPDMDGFE
TCVRIKQDGR HEHLPVIFMT ALTESEHVVR GFRVGGIDYV TKPVQPEELC ARIGAHVRRS
RAQLYAEAAL SLDTRAALIV GADGTIRWQS PQAARHIAAY TTAHDAPADA RQPTTARDTD
APTQLPALLR TWFVDWLARG APGDAVHEFS SGPIRRSASA TRGPEPGEWI VILKERDDTV
HCNALAERFG LTMREAEVLL WVSHGKTNRD IGDILGIAAR TVNKHLEHLF RKLHVETRAG
AAAAAIKMLE RT
|
|---|
| |