| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msil_2473 |
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| Symbol | |
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| ID | 7091025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylocella silvestris BL2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011666 |
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| Strand | + |
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| Start bp | 2701193 |
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| End bp | 2706571 |
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| Gene Length | 5379 bp |
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| Protein Length | 1792 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643465794 |
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| Product | GAF sensor hybrid histidine kinase |
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| Protein accession | YP_002362764 |
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| Protein GI | 217978617 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.443525 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGACGCGA TGGCGGTAAG ATCCGATCCC ACCCCTAGTC TGGACCAACT GCTCGGCGCC
CTCGAATCGC TGCGCCGGGG CGACTTCACC GTGCGCCTGC CGCGCAACGG CCGTGGCGTC
GAAGGCCAAA TCGCCGAGGC CTTCAACGAG ATCGCCGCAG CCAATCAATC CATCGCCGGC
CAGCTCGAAC GCGTCCTTGA GGCGGTCGGA CGCGAGGGCC AGACGGGAAC CCGCGTGCGC
TTCGGCCTGT CCGGCGGCGC CTGGGGCGAC ATGGAAGCCT CCGTCAACGC GCTGATTGAC
GATCTGGTCT GGCCGACGAC GGCGGCGACC TCGACCATCA CCGCGATCGC CAAGGGCGAC
CTGCTCCAGC CGATGCCGCT GGAATTCAAG GGGCGCCCGC TGAAGGGCGA GTTTCTGCGC
GCCGCCACCA CCGTCAATGC GATGATCGCC CAGCTCGACG TGTTCACTTC CGAGGTGACC
CGCGTCGCGC GCGAGGTCGG CGCCGGCGGC AAGCTCGGCG GCCAGGCCGA AGTGCGCGAG
GTGACCGGCG TCTGGAAGGA TTTGACCGAA AGCGTCAACT CCATGGCGTC GAATTTGACG
GCGCAGGTGC GCAATATTTC CGAGGTCACG ATCGCCGTCG CCCATGGCGA TCTGTCGAAG
AAAATCACGG TCGACGTGCG CGGCGAGATT TTGCAGCTGA AAGAAGCCAT CAACACGATG
GTCGACCAGC TGCGCTCCTT CGCCTCGGAG GTGACGCGCG TCGCGCGCGA GGTCGGCACC
GAAGGCAAGC TCGGCGGACA GGCGCTCGTG CCCGGCGTCG CCGGAACCTG GAAGGACCTC
ACCGACTCCG TCAACGCCAT GTGCGGCAAT CTCACGGCGC AGGTGCGCAA CATCGCCGAG
GTGACGACGG CGGTGGCCCG CGGCGATCTC TCGCGCAAAA TCACCGTCGA CGTCTCGGGC
GAGATCCTGG CGCTAAAAGA AACCATCAAC ACCATGGTGG ATCAGCTGAA CGGCTTCGCC
GGCGAAGTCA CGCGCGTCGC GCGCGAGGTC GGCACCGAGG GACGGCTTGG CGGACAGGCG
CAGGCGCCGG GCGTCGCCGG CACATGGAAA GACCTCACCG ACAATGTCAA TTCGATGGCC
TCGAACCTGA CCTCGCAGGT GCGCAACATC GCCGCCGTCT CGGCCGCCAT CGCCAGCGGC
GATTTGTCGA AGAAAATCAC CGTCAATGTG TCGGGCGAGA TTCTGGAGCT TAAGGAAACC
ATCAATACGA CTGTCGATCA GCTGAGCCGT TTCGCCTCCG AGGTGACCCG CGTCGCCCGC
GAGGTCGGCA CGGAGGGCAA GCTCGGCGGA CAGGCGCAGG TGCCCGGCGT CGCCGGCACG
TGGAAGGATC TGACCGAGAA CGTCAACTCG ATGGCGTCGA ACCTGACCGC GCAGGTGCGC
AACATTGCCG AGGTGACGAC GGCCGTGGCG CGCGGCGATC TTTCGCGGAA AATCACCGTC
GACGTCAAAG GCGAGATGCT GGAGCTGAAG AACACTGTCA ACACCATGGT GGACCAGCTC
AACGCCTTCG CCGGAGAAGT CACCCGCGTC GCGCGCGAGG TCGGCACGGA GGGCAAGCTC
GGCGGACAGG CGCAGGTGCC CGGCGTCGCC GGCACGTGGA AAGATTTGAC CGACAACGTC
AATTCAATGG CCGGCAACCT CACCGATCAG GTGCGCAACA TCGCCGGCGT CGCCACCGCG
ATCGCCAATG GCGACCTCTC GCGCAAGATC ACCGTCGACG TGCGCGGCGA AATCCTGCTG
TTGAAAGACA CGTTGAACAC CATGGTCGAT CAGCTGCGCT CCTTCGCCGG CGAAGTGTCG
CGCGTCGCGC GCGAGGTCGG CACCGACGGG CGCCTCGGCG GTCAGGCCGT CGTGCCCGGC
GTCGCCGGCA CGTGGAAGGA TTTGACCGAC AACGTCAATC TGCTCGCGGC CAATCTGACG
ACGCAAGTGC GCAACATCGC CGAGGTGACC ACAGCTGTGG CGCGCGGCAA TCTCTCGCGA
AAGATCACTG TCGACGTCAA GGGCGAAATT CTGGAGCTGA AGAACACAAT CAACACCATG
GTCGATCAGC TCAACGCCTT CGCCGGCGAG GTGACGCGCG TCGCGCGCGA GGTCGGCACG
GAGGGACGAC TCGGCGGACA GGCCAAGGTG CCGGGCGTCG CCGGAACGTG GAAGGATCTG
ACCGACACGG TCAACGTCAT GGCCGCCAAT CTGACCGAGC AGGTGCGCGG CATCGTCAAG
GTGGTCACCG CCGTCGCCAA TGGCGATCTG AAGCAGAATT TGACCGTCGC GTCCAAGGGC
GAGGTCGCTG CGCTCGCCGA GACGATCAAC AATATGACGC ATACGCTGGC GACCTTCGCC
GATCAGGTGA CGAGCGTCGC GCGCGAGGTC GGCGTCGAGG GCCGGCTCGG CGGACAGGCC
AATGTGCCGG GCGCCGCCGG CACCTGGAAG GATCTGACCG GCAACGTCAA TCTGCTCGCG
GCCAATCTGA CCACGCAGGT GCGCGCGATC GCCGAGGTCG CGACCGCCGT CACAAAGGGC
GATCTCACGC GCGCCATTCA GGTTGAGGCG CGCGGCGAAG TGTCCGAACT CAAAGACAAC
ATCAACACCA TGATCCGCAA TCTGCGGCTG ACCACGGAGC GCGGCGCCGA ACAGGACTGG
CTGAAGACAA ATCTCGCGCG CTTCACCAAT CTGCTGCAGG GCCAGCGCGA TCTCGTCACC
GTCGGGCGCA TGCTTTTGTC GGAGCTCGCG GAATTGATCG GCGCGCAGAA TGGCGTCATC
TATCAGGTCG AGGGCGACGA GCTGACGCTG CTTTCGGCCT ATGCCGATGA TGGCGATCAT
CCGCGGCGGA TCGCTTTCGG CGAGGGGCTC GTCGGACAAT GCGCGCGCGA CGGACGGCGC
ATCCTCATCT CCGACTTGCC GCCCAACGTG CTGCCGATCC GCTCCGGCCT GTTCAAGGCC
GCGCCGCGCA CCGCGATCGT GCTGCCGATC CTGTTCGAAG GCGAGGCGCG CGCGGTCATC
GAACTCGCTT CGCTGAATCC GCTGACGGAG TTGCAGATCT CCTTTCTGGA GCAGCTCACC
GCCAGCATCG GCATCGTCTT GAACAGCATC GCCGTCAGTA TGCAGACGGA AGGATTGCTC
GGACAATCGC AGCAGCTCGC GACCGAACTG CTGGCGCGGC AGACGGAGTT GCAACAGACC
AACGAACAGA TCGAGCTCAA GGCGCAACAG CTCGAGGAGC GTAACAATGA GGTGGAGGCC
AAGAATCAGC AGATCGAACA GGCCCGTCGC GCCCTTGAAG AAAAGGCCGG CGAGCTTGCT
CTGACCTCAA AATATAAATC GGAATTCCTG GCCAATATGA GCCATGAGCT GCGCACGCCC
TTGAACAGCA TCCTAATTCT CGGTCAACAG CTCAGCGACA ATGTCGAACA CAATCTGTCC
GACCGGCAGG TCGAATGCGC CCGCACCATC CATGCGGCGG GCAGCGATCT ACTCAATCTG
ATCAGCGACA TATTGGATCT GTCGAAGATC GAGTCCGGCA CCGTCTCGAT CGACGCCGAG
GAGATTTCCT TCGCGCATCT TTTGCAAATG ATCGCGCGCC CGTTCCGGCA CGAGGCCGAG
AGCCGCGGGC TCTCCTTCGA TGTCGAGGCG ACCGAGGGGC TTTCCGGCCA TATCGTCACC
GACGTCAAGC GCCTCCAGCA GATCTTGAAA AATCTCCTGT CCAACGCCTT CAAATTCACC
GCCGCCGGCG GCGTCAGCCT GAAAGTTGCG CCGGCCGCGT CCGGATGGAG CGCGGATAAT
CTGTCGTTGG CGCGCGCCAA GGGCGTCGTC GCTTTCAAAG TCGCAGACAC CGGCATCGGC
ATCTCGGCCG AAAAGCAGAA GATCATTTTT GAAGCATTTC AGCAGGCGGA CGCGGGCACG
AGCCGCAAAT ATGGCGGCAC CGGCCTCGGG CTGGCGATCA GCCGCGACCT CGCGCAGCTG
CTCGGCGGCG AGATCCAGTT GCGAAGCGTC CCGGGCGAAG GCAGCGTCTT CACGCTTTAT
CTGCCGCTCG CCTACACGAA TGTCGAGGTC GCGCCGCGCG CCGCCCATGA CGAGGGGCGC
ACCTTCGCCG CGCAACAGAG CGATCAGGCC GACGCCTGGA CCGACGACCG CGCAGCGATC
GAGCCCGGCG ATCTGACGCT CCTGATCGTC GAGGCGGATG AACGCGGCGC CCGCGCCGCC
GCCGCGATCG GCCGAGAAAT CGGCTTCAAG GCGATCGCCG CCGCGCGCGG GGCGGACGCG
CCGGGGCTGG CGGATCTCTA CAGGCCCGCC GCGATCCTGC TCAACCTTGG CCTCGCCGAT
CCGCCGGGCT GGAATGTGCT GGCGCAGCTG AAGCAGTCGA TCGCGACCCG GCACATTCCG
GTTGCGGCGA CGGGCGCTAT AGAGGATCGA CACTATGCTC TGTCGCGCGG CGCTTTCGAT
TTTCTGGAAG CCCCGGTTCG GCCTGGCGAT CTGAAGGCCG CGCTGATGCG GCTCAAGACT
TTTGCGGCAA GGCAGCAGAA AACGCTGCTG CTGACGACGA GCGAACCCGG GAAGGCTCAA
TGGGACGAGC TCCTCGGAGG CGATGACGTC GAGATCATCG CCGCGGCGAC CGCCGCCGAC
GCGCTTGCCG CGCTGCGCGA ACGCGCGATC GACGCCGTTG CGCAGGACTT TAAGTCCGCG
CGCGAGCCCG GCTTCGATCT CATCGCGCAA ATGCGCGATG ACGACGCGCT CTGCCGCACC
CCGATCGTTT TGTTCGCGGA AGAGGGTCTG TCGCCCGACG AGGAGGGACG AATCGACGCG
CTCTCCCGGT CGCTCGTTCT GAAGAAGGCG CTGTCGCCGG AACGGCTGCT TGACGAGACG
GCGCTTGCGC TGCATCGCTC CGTGCCTGAG CTTTCCGCCG ACAAGCGGGC GCTGATCGAG
CGCCTGTATG ATTCGAATGA CGATCTCGTT GGCCGGACCG TTCTTCTCGT CGATGATGAC
GCGCGCAATA TTTTCGCGCT AAGCGGCGTC CTGGAGCGGC GCGGCATGAG CGTTCTGACC
GCCTCCAATG GAGGCGAGGC GATCGAATCG CTACGCGCGC GCCCCGAGAT CGAAATCGTC
TTGATGGATG TGATGATGCC CGACATGGAT GGCTATGAGA CGATGCAGCG GGTGCGCACG
GAGCCGGCGT TCCGGCGCCT GCCGATTGTC GCCCTCACCG CAAGAGCGAT GAAGGGAGAC
CGCGAAAAAT GCATCGACGC CGGCGCGTCG GATTATCTCG CAAAGCCGGT CGACCGCGAA
CAATTGCTCG CCGTCCTGCG CATGTGGCTG CACCGGTAG
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| Protein sequence | MDAMAVRSDP TPSLDQLLGA LESLRRGDFT VRLPRNGRGV EGQIAEAFNE IAAANQSIAG
QLERVLEAVG REGQTGTRVR FGLSGGAWGD MEASVNALID DLVWPTTAAT STITAIAKGD
LLQPMPLEFK GRPLKGEFLR AATTVNAMIA QLDVFTSEVT RVAREVGAGG KLGGQAEVRE
VTGVWKDLTE SVNSMASNLT AQVRNISEVT IAVAHGDLSK KITVDVRGEI LQLKEAINTM
VDQLRSFASE VTRVAREVGT EGKLGGQALV PGVAGTWKDL TDSVNAMCGN LTAQVRNIAE
VTTAVARGDL SRKITVDVSG EILALKETIN TMVDQLNGFA GEVTRVAREV GTEGRLGGQA
QAPGVAGTWK DLTDNVNSMA SNLTSQVRNI AAVSAAIASG DLSKKITVNV SGEILELKET
INTTVDQLSR FASEVTRVAR EVGTEGKLGG QAQVPGVAGT WKDLTENVNS MASNLTAQVR
NIAEVTTAVA RGDLSRKITV DVKGEMLELK NTVNTMVDQL NAFAGEVTRV AREVGTEGKL
GGQAQVPGVA GTWKDLTDNV NSMAGNLTDQ VRNIAGVATA IANGDLSRKI TVDVRGEILL
LKDTLNTMVD QLRSFAGEVS RVAREVGTDG RLGGQAVVPG VAGTWKDLTD NVNLLAANLT
TQVRNIAEVT TAVARGNLSR KITVDVKGEI LELKNTINTM VDQLNAFAGE VTRVAREVGT
EGRLGGQAKV PGVAGTWKDL TDTVNVMAAN LTEQVRGIVK VVTAVANGDL KQNLTVASKG
EVAALAETIN NMTHTLATFA DQVTSVAREV GVEGRLGGQA NVPGAAGTWK DLTGNVNLLA
ANLTTQVRAI AEVATAVTKG DLTRAIQVEA RGEVSELKDN INTMIRNLRL TTERGAEQDW
LKTNLARFTN LLQGQRDLVT VGRMLLSELA ELIGAQNGVI YQVEGDELTL LSAYADDGDH
PRRIAFGEGL VGQCARDGRR ILISDLPPNV LPIRSGLFKA APRTAIVLPI LFEGEARAVI
ELASLNPLTE LQISFLEQLT ASIGIVLNSI AVSMQTEGLL GQSQQLATEL LARQTELQQT
NEQIELKAQQ LEERNNEVEA KNQQIEQARR ALEEKAGELA LTSKYKSEFL ANMSHELRTP
LNSILILGQQ LSDNVEHNLS DRQVECARTI HAAGSDLLNL ISDILDLSKI ESGTVSIDAE
EISFAHLLQM IARPFRHEAE SRGLSFDVEA TEGLSGHIVT DVKRLQQILK NLLSNAFKFT
AAGGVSLKVA PAASGWSADN LSLARAKGVV AFKVADTGIG ISAEKQKIIF EAFQQADAGT
SRKYGGTGLG LAISRDLAQL LGGEIQLRSV PGEGSVFTLY LPLAYTNVEV APRAAHDEGR
TFAAQQSDQA DAWTDDRAAI EPGDLTLLIV EADERGARAA AAIGREIGFK AIAAARGADA
PGLADLYRPA AILLNLGLAD PPGWNVLAQL KQSIATRHIP VAATGAIEDR HYALSRGAFD
FLEAPVRPGD LKAALMRLKT FAARQQKTLL LTTSEPGKAQ WDELLGGDDV EIIAAATAAD
ALAALRERAI DAVAQDFKSA REPGFDLIAQ MRDDDALCRT PIVLFAEEGL SPDEEGRIDA
LSRSLVLKKA LSPERLLDET ALALHRSVPE LSADKRALIE RLYDSNDDLV GRTVLLVDDD
ARNIFALSGV LERRGMSVLT ASNGGEAIES LRARPEIEIV LMDVMMPDMD GYETMQRVRT
EPAFRRLPIV ALTARAMKGD REKCIDAGAS DYLAKPVDRE QLLAVLRMWL HR
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