Gene PCC7424_2188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPCC7424_2188 
Symbol 
ID7108918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7424 
KingdomBacteria 
Replicon accessionNC_011729 
Strand
Start bp2435074 
End bp2436228 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content37% 
IMG OID643480441 
Productresponse regulator receiver sensor signal transduction histidine kinase 
Protein accessionYP_002377478 
Protein GI218439149 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase
[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.00677544 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTAATG ATAAAGGAAA CATCCTGGTT GTTGATGATA CCCCGGACAA TTTGCGCCTT 
TTAGCGGCAA TGCTGTCAAA AAAAGGCTAT ACCGTGCGAA AAGCCCTCAA TGGACAAATA
GCCATTGCTA CGGTTCACAG TGTCCCCCCA GATATTATTT TACTTGATAT TAATATGCCT
AATATGAATG GCTATCAAGT TTGTCAAACC CTTAAAGCGG ATGAACAAAC TAAAGATATT
CCAATTATTT TTATTAGTGC CCTTGATGAT GTAATCGATA AAGTTAAGGC GTTTAATATG
GGGGGAGTTG ATTATATTAC TAAACCTTTT CAAGGAGAAG AAGTTATTGC CAGAATTGAA
AATCAGCTTA CTATCTGTCG TCAAAAAAAA CAACTTCAAC AAGAAATTTT AGACAAACAA
AAAGCACAAG AAGCTTTACA AGTGTATCTC CATGCTGTCT CTCACGACTT ACGCAACCCG
GTTATTGCTA TGTCAATGAT TTTTAATCAT TTACTTAAAT CAGCTAATGA GTTAGAGCCA
AAAATTTCTA TTCCCCGTTC CACTTTTCAA CAATTAGTTA ATAGTTGCGA TCGCCAGTTA
TCCTTAATCA ACTCATTAGT AGAAATACAG CAATATGATG TGTGGGGAGT GAGTTTAGAC
TGTCGCCCTT TAAATCTGTA TGATTTTGCT CAACAATTAG CCATTGAATG GGAACTAAGA
TTACAGGAAC ATCAAGCCAT TTTAGATAAT CAAATTTCTC CAGACTTACC CAAAGTTTAC
GCGGATAATC ATCAACTTTG GCGAGTCTAT GAAAATTTAA TTAATAATGC CCTTAAATAT
AATTCACCGG AACTTAAAAT TATCCTCGAT GCTGAAATTT TAGAAGAAAA AACCGACAAT
CAATCAACAT CTATAATGAT TCGTTGTACC GTAACAGATA ATGGGATTGG GATGACGGGT
GAAGTTGCTA AGGGATTATT TGAACGGTAT TATCGAGGAC AGCACACAAG ACACACCGCC
GGGTTAGGAT TAGGATTATA TTTATGCCGT CAAATTATTG AGGCTCATGG GGGAAAAATA
GGGGTTATTA CTCATCCGGA TGATGGGGCA AAGTTTTGGT TTACTTTGCC GGTTTATGAG
TCTAAACTAA GCTAA
 
Protein sequence
MTNDKGNILV VDDTPDNLRL LAAMLSKKGY TVRKALNGQI AIATVHSVPP DIILLDINMP 
NMNGYQVCQT LKADEQTKDI PIIFISALDD VIDKVKAFNM GGVDYITKPF QGEEVIARIE
NQLTICRQKK QLQQEILDKQ KAQEALQVYL HAVSHDLRNP VIAMSMIFNH LLKSANELEP
KISIPRSTFQ QLVNSCDRQL SLINSLVEIQ QYDVWGVSLD CRPLNLYDFA QQLAIEWELR
LQEHQAILDN QISPDLPKVY ADNHQLWRVY ENLINNALKY NSPELKIILD AEILEEKTDN
QSTSIMIRCT VTDNGIGMTG EVAKGLFERY YRGQHTRHTA GLGLGLYLCR QIIEAHGGKI
GVITHPDDGA KFWFTLPVYE SKLS