Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cthe_3069 |
Symbol | |
ID | 4809943 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium thermocellum ATCC 27405 |
Kingdom | Bacteria |
Replicon accession | NC_009012 |
Strand | + |
Start bp | 3610612 |
End bp | 3611304 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640108493 |
Product | two component transcriptional regulator |
Protein accession | YP_001039458 |
Protein GI | 125975548 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000000467461 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAAGA TTCTTATTGT TGAAGATGAT GAAAGCATAG GAGAGCTTTT GCGGGACTAT CTTGAAATCA ACGGCTTTTC TGTGGACATA TGCATGAATG GGACTGAAGG TTTAAAGCGT ATCAGAGACG GGGAGTACGA TCTTTTGATA CTTGACATTA TGCTGCCCGG TATGAATGGA TATGAAATAT TGAAAAAAAT CCGGGATGAA AAAGATATTC CTGTGCTTAT TGTGTCTGCA AAGAAAGAAG AATTTGACAA AATTCACGGT TTGAAACTTG GAGCCGATGA CTATATTACA AAACCTTTCA GTCCGGGGGA GCTTGTGGCA AGGGTGAATG CTCACATAGC AAAATACGAG AGACTCAGAA ACAAATATGG GAATAATAAT GTAAATTCCA TTACTATAAG AGGACTTGAA ATTCAAAAGG ATTCCAGAAG GGTTTTTGTG AACGGAAAAG AAGTAAATCT GGCACAAAAA GAATTTGACG TTCTTTTGTT TTTGGCCCAG AATCCCAACA GAGTTTTTTC AAGGGAAGAG ATTTTTGACA GAGTATGGGG AATGGATGCT TTGGGAGATG CGGCAACAGT GACTGTTCAT ATTGGAAGAA TAAGGGAGAA AATCGAGTCT GACCCTTCAA ATCCCCAATA TATTGAAACT GTCTGGGGAG CAGGGTATAG ACTGAGAGCA TAA
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Protein sequence | MRKILIVEDD ESIGELLRDY LEINGFSVDI CMNGTEGLKR IRDGEYDLLI LDIMLPGMNG YEILKKIRDE KDIPVLIVSA KKEEFDKIHG LKLGADDYIT KPFSPGELVA RVNAHIAKYE RLRNKYGNNN VNSITIRGLE IQKDSRRVFV NGKEVNLAQK EFDVLLFLAQ NPNRVFSREE IFDRVWGMDA LGDAATVTVH IGRIREKIES DPSNPQYIET VWGAGYRLRA
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