Gene Cthe_3069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCthe_3069 
Symbol 
ID4809943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium thermocellum ATCC 27405 
KingdomBacteria 
Replicon accessionNC_009012 
Strand
Start bp3610612 
End bp3611304 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content39% 
IMG OID640108493 
Producttwo component transcriptional regulator 
Protein accessionYP_001039458 
Protein GI125975548 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000467461 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAAGA TTCTTATTGT TGAAGATGAT GAAAGCATAG GAGAGCTTTT GCGGGACTAT 
CTTGAAATCA ACGGCTTTTC TGTGGACATA TGCATGAATG GGACTGAAGG TTTAAAGCGT
ATCAGAGACG GGGAGTACGA TCTTTTGATA CTTGACATTA TGCTGCCCGG TATGAATGGA
TATGAAATAT TGAAAAAAAT CCGGGATGAA AAAGATATTC CTGTGCTTAT TGTGTCTGCA
AAGAAAGAAG AATTTGACAA AATTCACGGT TTGAAACTTG GAGCCGATGA CTATATTACA
AAACCTTTCA GTCCGGGGGA GCTTGTGGCA AGGGTGAATG CTCACATAGC AAAATACGAG
AGACTCAGAA ACAAATATGG GAATAATAAT GTAAATTCCA TTACTATAAG AGGACTTGAA
ATTCAAAAGG ATTCCAGAAG GGTTTTTGTG AACGGAAAAG AAGTAAATCT GGCACAAAAA
GAATTTGACG TTCTTTTGTT TTTGGCCCAG AATCCCAACA GAGTTTTTTC AAGGGAAGAG
ATTTTTGACA GAGTATGGGG AATGGATGCT TTGGGAGATG CGGCAACAGT GACTGTTCAT
ATTGGAAGAA TAAGGGAGAA AATCGAGTCT GACCCTTCAA ATCCCCAATA TATTGAAACT
GTCTGGGGAG CAGGGTATAG ACTGAGAGCA TAA
 
Protein sequence
MRKILIVEDD ESIGELLRDY LEINGFSVDI CMNGTEGLKR IRDGEYDLLI LDIMLPGMNG 
YEILKKIRDE KDIPVLIVSA KKEEFDKIHG LKLGADDYIT KPFSPGELVA RVNAHIAKYE
RLRNKYGNNN VNSITIRGLE IQKDSRRVFV NGKEVNLAQK EFDVLLFLAQ NPNRVFSREE
IFDRVWGMDA LGDAATVTVH IGRIREKIES DPSNPQYIET VWGAGYRLRA