More than 300 homologs were found in PanDaTox collection
for query gene Phep_4249 on replicon NC_013061
Organism: Pedobacter heparinus DSM 2366



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013061  Phep_4249  ATP-binding region ATPase domain protein  100 
 
 
374 aa  747    Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_2802  response regulator receiver sensor signal transduction histidine kinase  36.67 
 
 
406 aa  248  9e-65  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2715  sensor histidine kinase/response regulator  40.82 
 
 
393 aa  247  3e-64  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.615592  n/a   
 
 
-
 
NC_007005  Psyr_2448  response regulator receiver:ATP-binding region, ATPase-like:histidine kinase A, N-terminal  40.26 
 
 
393 aa  246  6.999999999999999e-64  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.760608  hitchhiker  0.00120668 
 
 
-
 
NC_010501  PputW619_2109  response regulator receiver sensor signal transduction histidine kinase  36.96 
 
 
408 aa  240  2.9999999999999997e-62  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_2649  response regulator receiver Signal transduction histidine kinase  38.66 
 
 
404 aa  239  4e-62  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.699737 
 
 
-
 
NC_002947  PP_3758  response regulator receiver sensor signal transduction histidine kinase  36.87 
 
 
408 aa  239  5e-62  Pseudomonas putida KT2440  Bacteria  normal  normal  0.734482 
 
 
-
 
NC_009507  Swit_5356  response regulator receiver sensor signal transduction histidine kinase  35.04 
 
 
377 aa  238  1e-61  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.940445 
 
 
-
 
NC_009512  Pput_2005  response regulator receiver sensor signal transduction histidine kinase  36.76 
 
 
408 aa  234  1.0000000000000001e-60  Pseudomonas putida F1  Bacteria  normal  normal  0.343751 
 
 
-
 
NC_010322  PputGB1_2145  response regulator receiver sensor signal transduction histidine kinase  37.11 
 
 
408 aa  235  1.0000000000000001e-60  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.001377 
 
 
-
 
NC_009439  Pmen_0172  response regulator receiver sensor signal transduction histidine kinase  38.3 
 
 
395 aa  234  2.0000000000000002e-60  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_2590  response regulator receiver sensor signal transduction histidine kinase  34.6 
 
 
405 aa  229  4e-59  Methylobacillus flagellatus KT  Bacteria  normal  normal  0.413696 
 
 
-
 
NC_011984  Avi_9098  bacteriophytochrome protein  33.96 
 
 
378 aa  222  9.999999999999999e-57  Agrobacterium vitis S4  Bacteria  normal  0.384054  n/a   
 
 
-
 
NC_008781  Pnap_1070  response regulator receiver sensor signal transduction histidine kinase  34.61 
 
 
402 aa  221  1.9999999999999999e-56  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.947697  normal  0.86399 
 
 
-
 
NC_013132  Cpin_3338  response regulator receiver sensor signal transduction histidine kinase  71.03 
 
 
526 aa  214  1.9999999999999998e-54  Chitinophaga pinensis DSM 2588  Bacteria  normal  hitchhiker  0.00782598 
 
 
-
 
NC_011884  Cyan7425_3767  response regulator receiver sensor hybrid histidine kinase  33.42 
 
 
587 aa  212  7e-54  Cyanothece sp. PCC 7425  Bacteria  normal  0.634012  normal 
 
 
-
 
NC_013061  Phep_3913  PAS sensor protein  48.5 
 
 
1337 aa  212  1e-53  Pedobacter heparinus DSM 2366  Bacteria  normal  0.290527  normal  0.28306 
 
 
-
 
NC_009441  Fjoh_3355  response regulator receiver sensor signal transduction histidine kinase  37.38 
 
 
405 aa  211  2e-53  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_0394  response regulator receiver sensor signal transduction histidine kinase  59.26 
 
 
531 aa  209  4e-53  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.549141 
 
 
-
 
NC_013216  Dtox_3783  histidine kinase  34.46 
 
 
544 aa  206  7e-52  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.401083  normal 
 
 
-
 
NC_013730  Slin_1036  multi-sensor signal transduction histidine kinase  61.49 
 
 
527 aa  204  2e-51  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_0585  ATP-binding region ATPase domain protein  32.56 
 
 
528 aa  197  2.0000000000000003e-49  Pedobacter heparinus DSM 2366  Bacteria  normal  0.215545  normal 
 
 
-
 
NC_009012  Cthe_0286  response regulator receiver sensor signal transduction histidine kinase  33.86 
 
 
424 aa  189  5e-47  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.136894  n/a   
 
 
-
 
NC_013440  Hoch_3251  response regulator receiver sensor signal transduction histidine kinase  29.6 
 
 
418 aa  189  5.999999999999999e-47  Haliangium ochraceum DSM 14365  Bacteria  normal  0.35487  normal  0.0265543 
 
 
-
 
NC_010002  Daci_3828  response regulator receiver sensor signal transduction histidine kinase  31.52 
 
 
392 aa  188  1e-46  Delftia acidovorans SPH-1  Bacteria  normal  0.287383  normal  0.140943 
 
 
-
 
NC_013061  Phep_1810  PAS sensor protein  40.17 
 
 
829 aa  185  1.0000000000000001e-45  Pedobacter heparinus DSM 2366  Bacteria  normal  hitchhiker  0.00000000473758 
 
 
-
 
NC_010622  Bphy_0134  histidine kinase  31.18 
 
 
547 aa  179  5.999999999999999e-44  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_3693  histidine kinase  33.07 
 
 
667 aa  177  3e-43  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_6238  histidine kinase  32.16 
 
 
519 aa  177  3e-43  Haliangium ochraceum DSM 14365  Bacteria  normal  0.547868  normal 
 
 
-
 
NC_011992  Dtpsy_0629  response regulator receiver sensor signal transduction histidine kinase  29.11 
 
 
382 aa  176  9e-43  Acidovorax ebreus TPSY  Bacteria  normal  0.67365  n/a   
 
 
-
 
NC_007348  Reut_B4539  response regulator receiver:ATP-binding region, ATPase-like:histidine kinase A, N-terminal  31.27 
 
 
1152 aa  174  2.9999999999999996e-42  Ralstonia eutropha JMP134  Bacteria  normal  0.329946  n/a   
 
 
-
 
NC_014248  Aazo_4229  response regulator receiver sensor signal transduction histidine kinase  30.56 
 
 
383 aa  173  3.9999999999999995e-42  'Nostoc azollae' 0708  Bacteria  normal  0.599633  n/a   
 
 
-
 
NC_008782  Ajs_0650  response regulator receiver sensor signal transduction histidine kinase  29.11 
 
 
382 aa  172  7.999999999999999e-42  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_3993  response regulator receiver sensor signal transduction histidine kinase  30.16 
 
 
390 aa  170  4e-41  Acidovorax citrulli AAC00-1  Bacteria  normal  0.967169  normal 
 
 
-
 
NC_013440  Hoch_2075  response regulator receiver sensor hybrid histidine kinase  29.68 
 
 
572 aa  169  1e-40  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_3370  PAS sensor protein  38.59 
 
 
713 aa  169  1e-40  Pedobacter heparinus DSM 2366  Bacteria  normal  0.277761  normal 
 
 
-
 
NC_010571  Oter_3856  response regulator receiver sensor signal transduction histidine kinase  33.16 
 
 
378 aa  167  2e-40  Opitutus terrae PB90-1  Bacteria  normal  normal  0.215089 
 
 
-
 
NC_013526  Tter_2374  multi-sensor signal transduction histidine kinase  38.43 
 
 
709 aa  167  2e-40  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0975  response regulator receiver sensor signal transduction histidine kinase  31.11 
 
 
383 aa  166  4e-40  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007952  Bxe_B1219  response regulator receiver sensor signal transduction histidine kinase  30.52 
 
 
375 aa  166  5e-40  Burkholderia xenovorans LB400  Bacteria  normal  0.745377  normal  0.599724 
 
 
-
 
NC_011146  Gbem_3274  response regulator receiver sensor signal transduction histidine kinase  31.23 
 
 
383 aa  166  6.9999999999999995e-40  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2639  response regulator receiver sensor signal transduction histidine kinase  29.4 
 
 
396 aa  164  2.0000000000000002e-39  Geobacter metallireducens GS-15  Bacteria  normal  0.136447  normal  0.717158 
 
 
-
 
NC_013061  Phep_2114  ATP-binding region ATPase domain protein  39.57 
 
 
400 aa  164  2.0000000000000002e-39  Pedobacter heparinus DSM 2366  Bacteria  normal  normal  0.673781 
 
 
-
 
NC_013132  Cpin_2260  response regulator receiver sensor signal transduction histidine kinase  32.43 
 
 
361 aa  162  1e-38  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.208609  normal 
 
 
-
 
NC_013061  Phep_1701  PAS sensor protein  40.17 
 
 
975 aa  161  2e-38  Pedobacter heparinus DSM 2366  Bacteria  normal  0.454558  hitchhiker  0.00934608 
 
 
-
 
NC_011071  Smal_1740  response regulator receiver sensor signal transduction histidine kinase  29.89 
 
 
377 aa  161  2e-38  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.129887 
 
 
-
 
NC_010623  Bphy_4207  response regulator receiver sensor signal transduction histidine kinase  29.65 
 
 
370 aa  161  2e-38  Burkholderia phymatum STM815  Bacteria  normal  normal  0.728065 
 
 
-
 
NC_008576  Mmc1_3271  PAS/PAC sensor hybrid histidine kinase  31.87 
 
 
1691 aa  161  2e-38  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_2815  PAS/PAC sensor signal transduction histidine kinase  36.13 
 
 
412 aa  160  3e-38  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_2188  response regulator receiver sensor signal transduction histidine kinase  29.35 
 
 
384 aa  160  4e-38  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.00677544 
 
 
-
 
NC_007413  Ava_1562  response regulator receiver Signal transduction histidine kinase  30.77 
 
 
369 aa  159  8e-38  Anabaena variabilis ATCC 29413  Bacteria  normal  0.847548  normal  0.236297 
 
 
-
 
NC_010676  Bphyt_5387  response regulator receiver sensor signal transduction histidine kinase  29.7 
 
 
375 aa  158  1e-37  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.0971839 
 
 
-
 
NC_013440  Hoch_6548  response regulator receiver sensor signal transduction histidine kinase  30.47 
 
 
397 aa  156  4e-37  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.543575 
 
 
-
 
NC_009675  Anae109_2597  PAS/PAC sensor signal transduction histidine kinase  35.42 
 
 
448 aa  156  6e-37  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.067404 
 
 
-
 
NC_011145  AnaeK_3781  multi-sensor signal transduction histidine kinase  39.83 
 
 
592 aa  155  1e-36  Anaeromyxobacter sp. K  Bacteria  normal  0.233259  n/a   
 
 
-
 
NC_007519  Dde_1941  response regulator receiver sensor signal transduction histidine kinase  31.71 
 
 
395 aa  154  2e-36  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.0596409  n/a   
 
 
-
 
NC_007760  Adeh_2634  multi-sensor signal transduction histidine kinase  35.71 
 
 
451 aa  154  2e-36  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.0932991  n/a   
 
 
-
 
NC_011891  A2cp1_3864  multi-sensor signal transduction histidine kinase  39.83 
 
 
592 aa  154  2e-36  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.130733  n/a   
 
 
-
 
NC_013061  Phep_2878  PAS sensor protein  38.1 
 
 
372 aa  154  2.9999999999999998e-36  Pedobacter heparinus DSM 2366  Bacteria  normal  0.587986  normal 
 
 
-
 
NC_011831  Cagg_0980  GAF sensor signal transduction histidine kinase  37.19 
 
 
725 aa  153  4e-36  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.209286  normal  0.144143 
 
 
-
 
NC_011145  AnaeK_2720  PAS/PAC sensor signal transduction histidine kinase  36.13 
 
 
407 aa  153  5.9999999999999996e-36  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1131  response regulator receiver sensor signal transduction histidine kinase  30.27 
 
 
500 aa  152  7e-36  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_014248  Aazo_0932  response regulator receiver sensor signal transduction histidine kinase  30.37 
 
 
374 aa  152  7e-36  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_3724  multi-sensor signal transduction histidine kinase  38.53 
 
 
592 aa  152  1e-35  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_1826  response regulator receiver sensor signal transduction histidine kinase  31.48 
 
 
363 aa  152  1e-35  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_2175  response regulator receiver sensor signal transduction histidine kinase  31.09 
 
 
395 aa  151  2e-35  Haliangium ochraceum DSM 14365  Bacteria  normal  0.924768  normal  0.400775 
 
 
-
 
NC_009675  Anae109_3853  multi-sensor signal transduction histidine kinase  39.65 
 
 
591 aa  151  2e-35  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_3365  multi-sensor signal transduction histidine kinase  35.57 
 
 
733 aa  151  2e-35  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_0324  response regulator receiver sensor signal transduction histidine kinase  30.02 
 
 
424 aa  151  2e-35  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.046409  normal 
 
 
-
 
NC_009972  Haur_4061  multi-sensor signal transduction histidine kinase  35.59 
 
 
885 aa  150  3e-35  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.193403  n/a   
 
 
-
 
NC_011884  Cyan7425_4611  response regulator receiver sensor signal transduction histidine kinase  29.44 
 
 
1002 aa  150  4e-35  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.367657 
 
 
-
 
NC_011884  Cyan7425_4608  multi-sensor signal transduction histidine kinase  28.97 
 
 
1645 aa  149  7e-35  Cyanothece sp. PCC 7425  Bacteria  normal  0.284957  normal  0.407853 
 
 
-
 
NC_013440  Hoch_2262  response regulator receiver sensor signal transduction histidine kinase  28.2 
 
 
406 aa  149  7e-35  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.146487 
 
 
-
 
NC_011729  PCC7424_0500  response regulator receiver sensor signal transduction histidine kinase  29.82 
 
 
373 aa  148  2.0000000000000003e-34  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011831  Cagg_2626  response regulator receiver sensor signal transduction histidine kinase  28.57 
 
 
392 aa  147  2.0000000000000003e-34  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_0839  PAS/PAC sensor hybrid histidine kinase  36.96 
 
 
1207 aa  148  2.0000000000000003e-34  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_2694  PAS/PAC sensor signal transduction histidine kinase  36.89 
 
 
589 aa  146  5e-34  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.87998 
 
 
-
 
NC_009439  Pmen_4313  multi-sensor hybrid histidine kinase  35.08 
 
 
965 aa  145  8.000000000000001e-34  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.975749 
 
 
-
 
NC_010644  Emin_1198  response regulator receiver sensor signal transduction histidine kinase  30.93 
 
 
375 aa  145  8.000000000000001e-34  Elusimicrobium minutum Pei191  Bacteria  normal  hitchhiker  0.00328285 
 
 
-
 
NC_009675  Anae109_2823  histidine kinase  37.55 
 
 
501 aa  145  8.000000000000001e-34  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_4463  multi-sensor hybrid histidine kinase  36.21 
 
 
839 aa  145  8.000000000000001e-34  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_4211  PAS/PAC sensor signal transduction histidine kinase  38.06 
 
 
403 aa  145  8.000000000000001e-34  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.108613  normal 
 
 
-
 
NC_011831  Cagg_0647  PAS/PAC sensor hybrid histidine kinase  35.13 
 
 
944 aa  144  2e-33  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.0902383 
 
 
-
 
NC_009439  Pmen_4312  multi-sensor signal transduction histidine kinase  32.12 
 
 
640 aa  144  2e-33  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_1114  response regulator receiver sensor signal transduction histidine kinase  31.04 
 
 
373 aa  144  2e-33  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_008009  Acid345_3503  multi-sensor signal transduction histidine kinase  35.89 
 
 
1043 aa  143  4e-33  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_010424  Daud_1898  multi-sensor signal transduction histidine kinase  37.6 
 
 
571 aa  143  5e-33  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.589687  n/a   
 
 
-
 
NC_011145  AnaeK_0802  GAF sensor signal transduction histidine kinase  37.07 
 
 
587 aa  143  5e-33  Anaeromyxobacter sp. K  Bacteria  normal  0.773486  n/a   
 
 
-
 
NC_013757  Gobs_1520  multi-sensor signal transduction histidine kinase  35.74 
 
 
634 aa  142  8e-33  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.125308  n/a   
 
 
-
 
NC_011884  Cyan7425_2570  response regulator receiver sensor signal transduction histidine kinase  28.57 
 
 
381 aa  142  8e-33  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_0539  PAS/PAC sensor signal transduction histidine kinase  36.71 
 
 
383 aa  142  9e-33  Anaeromyxobacter sp. K  Bacteria  normal  0.143908  n/a   
 
 
-
 
NC_011891  A2cp1_0535  PAS/PAC sensor signal transduction histidine kinase  36.71 
 
 
383 aa  142  9e-33  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.175177  n/a   
 
 
-
 
NC_011769  DvMF_2541  multi-sensor signal transduction histidine kinase  35.29 
 
 
874 aa  142  9.999999999999999e-33  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_007760  Adeh_2090  GAF sensor signal transduction histidine kinase  37.5 
 
 
763 aa  142  9.999999999999999e-33  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.163656  n/a   
 
 
-
 
NC_009483  Gura_1221  PAS/PAC sensor signal transduction histidine kinase  35.86 
 
 
637 aa  142  9.999999999999999e-33  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_1788  GAF sensor signal transduction histidine kinase  37.5 
 
 
763 aa  141  1.9999999999999998e-32  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_3703  Hpt sensor hybrid histidine kinase  35 
 
 
1021 aa  141  1.9999999999999998e-32  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.0219575 
 
 
-
 
NC_002939  GSU3138  sensor histidine kinase/response regulator  34.55 
 
 
484 aa  141  1.9999999999999998e-32  Geobacter sulfurreducens PCA  Bacteria  normal  0.312332  n/a   
 
 
-
 
NC_011891  A2cp1_1867  GAF sensor signal transduction histidine kinase  37.5 
 
 
763 aa  141  1.9999999999999998e-32  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_2494  multi-sensor signal transduction histidine kinase  32.79 
 
 
489 aa  140  3e-32  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal  0.228009 
 
 
-
 
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