More than 300 homologs were found in PanDaTox collection
for query gene Bphyt_5387 on replicon NC_010676
Organism: Burkholderia phytofirmans PsJN



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007952  Bxe_B1219  response regulator receiver sensor signal transduction histidine kinase  96.8 
 
 
375 aa  738    Burkholderia xenovorans LB400  Bacteria  normal  0.745377  normal  0.599724 
 
 
-
 
NC_010676  Bphyt_5387  response regulator receiver sensor signal transduction histidine kinase  100 
 
 
375 aa  760    Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.0971839 
 
 
-
 
NC_010623  Bphy_4207  response regulator receiver sensor signal transduction histidine kinase  77.69 
 
 
370 aa  578  1e-164  Burkholderia phymatum STM815  Bacteria  normal  normal  0.728065 
 
 
-
 
NC_010002  Daci_3828  response regulator receiver sensor signal transduction histidine kinase  47.67 
 
 
392 aa  315  7e-85  Delftia acidovorans SPH-1  Bacteria  normal  0.287383  normal  0.140943 
 
 
-
 
NC_011992  Dtpsy_0629  response regulator receiver sensor signal transduction histidine kinase  45.75 
 
 
382 aa  308  6.999999999999999e-83  Acidovorax ebreus TPSY  Bacteria  normal  0.67365  n/a   
 
 
-
 
NC_008752  Aave_3993  response regulator receiver sensor signal transduction histidine kinase  46.83 
 
 
390 aa  306  3e-82  Acidovorax citrulli AAC00-1  Bacteria  normal  0.967169  normal 
 
 
-
 
NC_008782  Ajs_0650  response regulator receiver sensor signal transduction histidine kinase  45.21 
 
 
382 aa  304  1.0000000000000001e-81  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_1740  response regulator receiver sensor signal transduction histidine kinase  45.5 
 
 
377 aa  289  5.0000000000000004e-77  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.129887 
 
 
-
 
NC_012791  Vapar_2802  response regulator receiver sensor signal transduction histidine kinase  39.29 
 
 
406 aa  241  1e-62  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_011984  Avi_9098  bacteriophytochrome protein  38.1 
 
 
378 aa  241  2e-62  Agrobacterium vitis S4  Bacteria  normal  0.384054  n/a   
 
 
-
 
NC_004578  PSPTO_2715  sensor histidine kinase/response regulator  36.76 
 
 
393 aa  229  6e-59  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.615592  n/a   
 
 
-
 
NC_002947  PP_3758  response regulator receiver sensor signal transduction histidine kinase  34.74 
 
 
408 aa  228  9e-59  Pseudomonas putida KT2440  Bacteria  normal  normal  0.734482 
 
 
-
 
NC_010322  PputGB1_2145  response regulator receiver sensor signal transduction histidine kinase  37.59 
 
 
408 aa  227  2e-58  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.001377 
 
 
-
 
NC_007492  Pfl01_2649  response regulator receiver Signal transduction histidine kinase  37.31 
 
 
404 aa  228  2e-58  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.699737 
 
 
-
 
NC_009512  Pput_2005  response regulator receiver sensor signal transduction histidine kinase  35.61 
 
 
408 aa  227  3e-58  Pseudomonas putida F1  Bacteria  normal  normal  0.343751 
 
 
-
 
NC_007005  Psyr_2448  response regulator receiver:ATP-binding region, ATPase-like:histidine kinase A, N-terminal  37.02 
 
 
393 aa  224  2e-57  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.760608  hitchhiker  0.00120668 
 
 
-
 
NC_010501  PputW619_2109  response regulator receiver sensor signal transduction histidine kinase  35.97 
 
 
408 aa  221  9.999999999999999e-57  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_009507  Swit_5356  response regulator receiver sensor signal transduction histidine kinase  37.47 
 
 
377 aa  219  7e-56  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.940445 
 
 
-
 
NC_009439  Pmen_0172  response regulator receiver sensor signal transduction histidine kinase  35.95 
 
 
395 aa  216  5.9999999999999996e-55  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008781  Pnap_1070  response regulator receiver sensor signal transduction histidine kinase  34.26 
 
 
402 aa  213  2.9999999999999995e-54  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.947697  normal  0.86399 
 
 
-
 
NC_007947  Mfla_2590  response regulator receiver sensor signal transduction histidine kinase  34.75 
 
 
405 aa  211  2e-53  Methylobacillus flagellatus KT  Bacteria  normal  normal  0.413696 
 
 
-
 
NC_011884  Cyan7425_3767  response regulator receiver sensor hybrid histidine kinase  35.43 
 
 
587 aa  199  5e-50  Cyanothece sp. PCC 7425  Bacteria  normal  0.634012  normal 
 
 
-
 
NC_013216  Dtox_3783  histidine kinase  31.48 
 
 
544 aa  190  2.9999999999999997e-47  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.401083  normal 
 
 
-
 
NC_013061  Phep_0585  ATP-binding region ATPase domain protein  29.71 
 
 
528 aa  181  1e-44  Pedobacter heparinus DSM 2366  Bacteria  normal  0.215545  normal 
 
 
-
 
NC_014248  Aazo_4229  response regulator receiver sensor signal transduction histidine kinase  29.54 
 
 
383 aa  174  1.9999999999999998e-42  'Nostoc azollae' 0708  Bacteria  normal  0.599633  n/a   
 
 
-
 
NC_007517  Gmet_2639  response regulator receiver sensor signal transduction histidine kinase  35.37 
 
 
396 aa  174  2.9999999999999996e-42  Geobacter metallireducens GS-15  Bacteria  normal  0.136447  normal  0.717158 
 
 
-
 
NC_009012  Cthe_0286  response regulator receiver sensor signal transduction histidine kinase  29.43 
 
 
424 aa  166  5e-40  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.136894  n/a   
 
 
-
 
NC_009675  Anae109_3228  histidine kinase  40.34 
 
 
387 aa  160  3e-38  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_2075  response regulator receiver sensor hybrid histidine kinase  32.53 
 
 
572 aa  160  5e-38  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_6238  histidine kinase  32.79 
 
 
519 aa  159  6e-38  Haliangium ochraceum DSM 14365  Bacteria  normal  0.547868  normal 
 
 
-
 
NC_013061  Phep_4249  ATP-binding region ATPase domain protein  29.7 
 
 
374 aa  158  1e-37  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_0324  response regulator receiver sensor signal transduction histidine kinase  29.44 
 
 
424 aa  158  1e-37  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.046409  normal 
 
 
-
 
NC_008254  Meso_1944  signal transduction histidine kinase  50 
 
 
507 aa  154  2e-36  Chelativorans sp. BNC1  Bacteria  normal  0.0183597  n/a   
 
 
-
 
NC_009675  Anae109_0030  integral membrane sensor signal transduction histidine kinase  38 
 
 
460 aa  151  2e-35  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.292632  normal 
 
 
-
 
NC_007760  Adeh_1782  PAS/PAC sensor signal transduction histidine kinase  40.17 
 
 
621 aa  151  2e-35  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_3693  histidine kinase  27.42 
 
 
667 aa  151  2e-35  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_2150  PAS/PAC sensor signal transduction histidine kinase  40.17 
 
 
595 aa  150  3e-35  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_009670  Oant_4781  signal transduction histidine kinase  33.16 
 
 
356 aa  150  4e-35  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.252184  n/a   
 
 
-
 
NC_011145  AnaeK_2058  PAS/PAC sensor signal transduction histidine kinase  40.17 
 
 
618 aa  150  4e-35  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_0278  histidine kinase  40.99 
 
 
405 aa  149  6e-35  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_0267  histidine kinase  40.99 
 
 
405 aa  148  1.0000000000000001e-34  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_0256  histidine kinase  40.89 
 
 
405 aa  148  1.0000000000000001e-34  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.459774  n/a   
 
 
-
 
NC_009675  Anae109_0278  histidine kinase  40.36 
 
 
471 aa  147  2.0000000000000003e-34  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.146348  normal  0.182643 
 
 
-
 
NC_013173  Dbac_0019  response regulator receiver modulated diguanylate cyclase  48.23 
 
 
341 aa  144  2e-33  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0416556  n/a   
 
 
-
 
NC_007348  Reut_B4539  response regulator receiver:ATP-binding region, ATPase-like:histidine kinase A, N-terminal  32.88 
 
 
1152 aa  143  4e-33  Ralstonia eutropha JMP134  Bacteria  normal  0.329946  n/a   
 
 
-
 
NC_010322  PputGB1_2988  histidine kinase  40.81 
 
 
380 aa  143  4e-33  Pseudomonas putida GB-1  Bacteria  normal  0.539821  normal  0.386359 
 
 
-
 
NC_009675  Anae109_1033  multi-sensor signal transduction histidine kinase  40.89 
 
 
557 aa  143  5e-33  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_3856  response regulator receiver sensor signal transduction histidine kinase  29.81 
 
 
378 aa  142  9.999999999999999e-33  Opitutus terrae PB90-1  Bacteria  normal  normal  0.215089 
 
 
-
 
NC_009675  Anae109_1538  PAS/PAC sensor signal transduction histidine kinase  37.08 
 
 
394 aa  141  1.9999999999999998e-32  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.461461  normal  0.397408 
 
 
-
 
NC_013173  Dbac_2855  response regulator receiver sensor signal transduction histidine kinase  29.09 
 
 
348 aa  140  3e-32  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_3355  response regulator receiver sensor signal transduction histidine kinase  27.83 
 
 
405 aa  140  3e-32  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_2188  response regulator receiver sensor signal transduction histidine kinase  25.72 
 
 
384 aa  140  3.9999999999999997e-32  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.00677544 
 
 
-
 
NC_011146  Gbem_3274  response regulator receiver sensor signal transduction histidine kinase  27.91 
 
 
383 aa  139  7.999999999999999e-32  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_1307  response regulator receiver sensor signal transduction histidine kinase  27.92 
 
 
391 aa  139  7.999999999999999e-32  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_4611  response regulator receiver sensor signal transduction histidine kinase  29.54 
 
 
1002 aa  139  7.999999999999999e-32  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.367657 
 
 
-
 
NC_007492  Pfl01_5255  diguanylate cyclase/phosphodiesterase  53.17 
 
 
707 aa  138  2e-31  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.864356  normal 
 
 
-
 
NC_010322  PputGB1_5008  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  52.38 
 
 
708 aa  136  6.0000000000000005e-31  Pseudomonas putida GB-1  Bacteria  normal  0.100946  normal 
 
 
-
 
NC_012918  GM21_0975  response regulator receiver sensor signal transduction histidine kinase  28.14 
 
 
383 aa  136  7.000000000000001e-31  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_004578  PSPTO_4896  sensor histidine kinase  36.89 
 
 
376 aa  135  9e-31  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_0285  response regulator receiver  41.5 
 
 
206 aa  135  9.999999999999999e-31  Thermobifida fusca YX  Bacteria  normal  0.102424  n/a   
 
 
-
 
NC_008709  Ping_3722  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  42.68 
 
 
727 aa  135  9.999999999999999e-31  Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_4275  multi-sensor signal transduction histidine kinase  49.62 
 
 
712 aa  134  1.9999999999999998e-30  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_2260  response regulator receiver sensor signal transduction histidine kinase  28.23 
 
 
361 aa  134  1.9999999999999998e-30  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.208609  normal 
 
 
-
 
NC_010501  PputW619_0507  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  58.41 
 
 
706 aa  134  3e-30  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_0037  response regulator receiver sensor signal transduction histidine kinase  29.02 
 
 
387 aa  134  3e-30  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_014248  Aazo_0932  response regulator receiver sensor signal transduction histidine kinase  30.5 
 
 
374 aa  134  3e-30  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_1562  response regulator receiver Signal transduction histidine kinase  29.3 
 
 
369 aa  133  3.9999999999999996e-30  Anabaena variabilis ATCC 29413  Bacteria  normal  0.847548  normal  0.236297 
 
 
-
 
NC_011145  AnaeK_4252  multi-sensor signal transduction histidine kinase  49.62 
 
 
712 aa  133  3.9999999999999996e-30  Anaeromyxobacter sp. K  Bacteria  normal  0.374039  n/a   
 
 
-
 
NC_009831  Ssed_1645  hypothetical protein  48.95 
 
 
344 aa  132  7.999999999999999e-30  Shewanella sediminis HAW-EB3  Bacteria  normal  0.176846  normal 
 
 
-
 
NC_002947  PP_4959  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  48.18 
 
 
708 aa  132  1.0000000000000001e-29  Pseudomonas putida KT2440  Bacteria  normal  0.714982  normal 
 
 
-
 
NC_007005  Psyr_4439  sensor histidine kinase  36.44 
 
 
376 aa  132  1.0000000000000001e-29  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_4832  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  50 
 
 
708 aa  131  1.0000000000000001e-29  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_007760  Adeh_4121  multi-sensor signal transduction histidine kinase  49.62 
 
 
712 aa  131  2.0000000000000002e-29  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.6651  n/a   
 
 
-
 
NC_013510  Tcur_2645  response regulator receiver protein  42.33 
 
 
215 aa  131  2.0000000000000002e-29  Thermomonospora curvata DSM 43183  Bacteria  normal  0.492308  n/a   
 
 
-
 
NC_011884  Cyan7425_4608  multi-sensor signal transduction histidine kinase  29.24 
 
 
1645 aa  130  3e-29  Cyanothece sp. PCC 7425  Bacteria  normal  0.284957  normal  0.407853 
 
 
-
 
NC_009675  Anae109_2365  multi-sensor signal transduction histidine kinase  34.96 
 
 
734 aa  130  4.0000000000000003e-29  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.656612  hitchhiker  0.0000890263 
 
 
-
 
NC_014165  Tbis_0184  response regulator receiver protein  50.35 
 
 
210 aa  129  6e-29  Thermobispora bispora DSM 43833  Bacteria  normal  0.186811  normal  0.929424 
 
 
-
 
NC_009767  Rcas_1646  response regulator receiver sensor signal transduction histidine kinase  26.09 
 
 
391 aa  129  7.000000000000001e-29  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.930467  normal  0.0178265 
 
 
-
 
NC_011729  PCC7424_1114  response regulator receiver sensor signal transduction histidine kinase  27.49 
 
 
373 aa  129  9.000000000000001e-29  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_007519  Dde_1941  response regulator receiver sensor signal transduction histidine kinase  27.65 
 
 
395 aa  129  9.000000000000001e-29  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.0596409  n/a   
 
 
-
 
NC_014211  Ndas_5203  response regulator receiver protein  53.08 
 
 
212 aa  129  1.0000000000000001e-28  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.372482 
 
 
-
 
NC_011729  PCC7424_3765  multi-sensor signal transduction histidine kinase  47.65 
 
 
562 aa  129  1.0000000000000001e-28  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.13531 
 
 
-
 
NC_013595  Sros_0400  response regulator receiver protein  49.65 
 
 
210 aa  129  1.0000000000000001e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_3271  PAS/PAC sensor hybrid histidine kinase  26.63 
 
 
1691 aa  129  1.0000000000000001e-28  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_0809  response regulator receiver sensor signal transduction histidine kinase  29.77 
 
 
367 aa  129  1.0000000000000001e-28  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_3968  sensor histidine kinase  39.82 
 
 
372 aa  127  2.0000000000000002e-28  Pseudomonas putida KT2440  Bacteria  normal  0.838601  normal  0.0786845 
 
 
-
 
NC_004578  PSPTO_5014  response regulator/sensory box/GGDEF domain/EAL domain protein  46.72 
 
 
719 aa  128  2.0000000000000002e-28  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_1964  response regulator receiver sensor signal transduction histidine kinase  26.93 
 
 
427 aa  128  2.0000000000000002e-28  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.00543356  normal  0.092514 
 
 
-
 
NC_007005  Psyr_0509  PAS:GGDEF  46.72 
 
 
719 aa  127  3e-28  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_3211  PAS/PAC sensor hybrid histidine kinase  45.39 
 
 
696 aa  127  3e-28  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.7085  normal 
 
 
-
 
NC_009439  Pmen_3647  response regulator receiver modulated diguanylate cyclase/phosphodiesterase  47.45 
 
 
715 aa  127  3e-28  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_1135  PAS/PAC sensor hybrid histidine kinase  42.62 
 
 
716 aa  126  5e-28  Opitutus terrae PB90-1  Bacteria  normal  normal  0.749109 
 
 
-
 
NC_002967  TDE0492  sensor histidine kinase/response regulator  29.49 
 
 
369 aa  125  9e-28  Treponema denticola ATCC 35405  Bacteria  normal  0.189978  n/a   
 
 
-
 
NC_009253  Dred_1269  signal transduction histidine kinase, nitrogen specific, NtrB  41.78 
 
 
509 aa  125  9e-28  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_0500  response regulator receiver sensor signal transduction histidine kinase  28.69 
 
 
373 aa  125  1e-27  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_007777  Francci3_4048  response regulator receiver protein  40.93 
 
 
241 aa  125  1e-27  Frankia sp. CcI3  Bacteria  normal  0.916406  normal 
 
 
-
 
NC_013131  Caci_0143  response regulator receiver protein  42.68 
 
 
206 aa  125  1e-27  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_1217  multi-sensor hybrid histidine kinase  44.9 
 
 
803 aa  125  1e-27  Magnetococcus sp. MC-1  Bacteria  normal  0.503931  normal  0.0882093 
 
 
-
 
NC_009921  Franean1_0667  response regulator receiver protein  40.29 
 
 
214 aa  125  1e-27  Frankia sp. EAN1pec  Bacteria  normal  0.0467725  normal  0.629252 
 
 
-
 
NC_011726  PCC8801_2743  response regulator receiver sensor signal transduction histidine kinase  24.36 
 
 
395 aa  124  2e-27  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
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