Gene Phep_0585 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0585 
Symbol 
ID8251673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp705073 
End bp706659 
Gene Length1587 bp 
Protein Length528 aa 
Translation table11 
GC content41% 
IMG OID644934234 
ProductATP-binding region ATPase domain protein 
Protein accessionYP_003090869 
Protein GI255530497 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.215545 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAAA TTAACATATT AATTGTTGAT GACAGACCCG AAAATATTAT TGCCCTCGAA 
GCATTGCTGC AAAGAAATGA CATCAATATC ATCAGCACCA CCAATCCCAA TGAAGCGCTC
CGCTTATCCT GGGAAATGGA TATTGCCATT GCCATGATTG ATGTTCAAAT GCCGGAAATG
GATGGATTTG AACTGGTAGA AATATTAAAA AGCAATCCCA GGACCAAAGA GATCCTGATC
ATATTTGTTA CTGCCATATC CAAAGAAACC AAATATGCCG TTAAAGGGCT AAGCACCGGG
GCGGTTGATT ACCTGTATAA ACCCCTCGAC CCTTATGTTA CAGCAGCAAA AGTGGATTCT
TTTATCCAGT TTATCAGAAA CCAAAGAGAA GTAAAAAAGA AGAACAAAGA GCTTGAAGCT
TATCAGAAAG AACTGATCAA GGCCAAAGAA CTTGCCGAAA CAGGTAAAAG AATTAAGGAT
AATTTTTTGG CCAATATGAG CCATGAGATC CGGACCCCAA TCAATGGAAT CATCGGTATT
GCACAGCTTT TAAAGAAGAC GGAGCTGACA GATGAACAAA GGGAGATGGT TAACCTGCTT
GAAATTTCGT CCAACTCATT ACTGGGCGTA ATCAATGATG TACTCGACCT GTCAAAAATT
GAATCGGGTA AGTTCAAGAT CAACCGTACT GCAACCGATA TCATTAAAAT ATGTGAATCG
GTGGTAGATC TGCTCCGGAT CCCATCTATC GAAAAGAAAC TCGACCTTAA GCTGGCGCTC
GATTCTGAAC TGCCAAAAAT GATCCTGGCC GATTCCCTCC GCCTCAACCA GATCCTGATG
AACCTAATCG GAAATGCCAT TAAGTTTACC CACCAGGGTA GTGTAACCTT AAAGGTTGAG
ATACTGAACA GAAAGGGAAA CAACCTTCAA CTCCGGTTTT CTGTTGCAGA TACCGGCATA
GGGATAGCCA AAGAGAATAT TGACAAAATT TTCGAAACCT TTGAACAGGC AGATGAGCAG
ACTACCATTA AATTTGGTGG TACAGGCCTG GGTTTATCTA TAGTTAAAAA TCTGGCCAAA
TTAAAAGGAG GTACGCTCGA AGTCATAAGT GAAGAAAATA TTGGCAGTAC TTTTAGTTTC
AGCAACTGGT ATGAAGTATT AAAAGACGCT GATGTACCCG AAAAACAACT GGAAGAAAAA
CTGATGCCAT TTAAAAATTT AAATATTCTT GTAGCGGAAG ACAATCCCAT TAATAAATTC
CTGATCATTA AAATCCTGCA GAACTGGGAG GTACAATTGG AAGTGGTAGA AAACGGACAG
CAAGCCCTAG ACAAGCTCAG GGAAAAGCAT TACGACCTCA TTTTAATGGA TACTTTTATG
CCTGTGATGA ACGGGCTGGA AGCCATCCGA TTGATCAGGG AAGGTTATGC TCCCGGAAAG
GAAAATATTC CCATCATCAC ATTTTCAGCG GCAGTACTCG ACACCGATAA AGAAACAGCA
ATAGCGGCCG GCGCCAATGA TGTGATCAGC AAACCATTTG AACCGGCTGT ACTGTACAAA
AAAATACAGG AATATACTAT TGGTTAA
 
Protein sequence
MEKINILIVD DRPENIIALE ALLQRNDINI ISTTNPNEAL RLSWEMDIAI AMIDVQMPEM 
DGFELVEILK SNPRTKEILI IFVTAISKET KYAVKGLSTG AVDYLYKPLD PYVTAAKVDS
FIQFIRNQRE VKKKNKELEA YQKELIKAKE LAETGKRIKD NFLANMSHEI RTPINGIIGI
AQLLKKTELT DEQREMVNLL EISSNSLLGV INDVLDLSKI ESGKFKINRT ATDIIKICES
VVDLLRIPSI EKKLDLKLAL DSELPKMILA DSLRLNQILM NLIGNAIKFT HQGSVTLKVE
ILNRKGNNLQ LRFSVADTGI GIAKENIDKI FETFEQADEQ TTIKFGGTGL GLSIVKNLAK
LKGGTLEVIS EENIGSTFSF SNWYEVLKDA DVPEKQLEEK LMPFKNLNIL VAEDNPINKF
LIIKILQNWE VQLEVVENGQ QALDKLREKH YDLILMDTFM PVMNGLEAIR LIREGYAPGK
ENIPIITFSA AVLDTDKETA IAAGANDVIS KPFEPAVLYK KIQEYTIG