Gene Mmc1_3693 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_3693 
Symbol 
ID4480973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp4635535 
End bp4637538 
Gene Length2004 bp 
Protein Length667 aa 
Translation table11 
GC content46% 
IMG OID639724449 
Producthistidine kinase 
Protein accessionYP_867584 
Protein GI117926967 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGAGC TGTGTCCAAA AATTTTGATC GTCGATGACC GCCCAGAAAA TTTATTTGCC 
CTCCATTCAA TCTTAAAAGT GCTCCGTGTT GAGATCATCC AAGCTCCCTC TGGAAATGAC
GCCTTGGCCC TGGCCAATGA GCATGACTTT GCCTTAATTT ATCTGGATAT AGACATGCCA
GGGATGGATG GGTATGAGGT TGCTCGTCAC CTGAAATCCT ATGATAAGAC CATGAATATT
CCTATCCTCT TTCTCACCTC GGCTTACCAT GATGAGTTCC ATAGTCTGAT TGCCTATCAC
GCCGGTGGCA TCGACTATAT TGAAAAACCC ATATGCCATG AAATCCTACT TGCCAAAGCC
AAACTATTTT TAGAACTCTA CATCAACCGC AAAAAGGTTG AGCGAACCAA TATCATCCTC
CAAAGCGAGG TCCTCAGACG CCAAGCGACC GAAACGGCCT ACCGGGAATG TGAATCCAGG
CATGAGGCAA AGAGGGTTTT TATCGCCAAA ATGAGTCATG AATTCCGCAC GCCGATGAAC
AGCATGATCG GCATGTTAGA TATGCTAGAG GGCACACCAT TGTCTGAAGA GCAGTTTGAA
TACATCGACT CAATGCGCCA AGCAACGGAC CACCTAACCA GTATGGTTGG TAATCTTCTT
GATATTACCC AGTTGGAAGC AGGAATTATC AAAATCAAAG AAAAACCCTT TAGCCTCATA
GCCTTGGTCA AGAATGTCAT CAATATTATT CGACCATTGG CCTTTAAGAA AAAGATTCTT
TTTATTCCCT ATATCTCGCC TGACATTGCG CCTTGGTTTA TTGGTGATGC CAATCGTCTT
CAGCAAATCC TGGTCAATCT ACTGGGCAAT GCCATCAAAT ATACCCACTG GGGCAGTGTG
GCGCTGCTGA TCTCTGCAAA GCCTGTAAAC TCTCGTTATA ACGTTGAATT TAAAGTGGTT
GATACAGGAG ATGGCATCGA TTTAGAGAAT CAGGAGAAGA TTTTTCAGGC TTTTGTCCGT
GGTGCCTACA ATAACGCTGA AACCACCGAG GGGACGGGAC TTGGCTTGTC GATTTGTAAA
AATCTCGTCG ATCTGATGCA AGGAACCATC GAACTCAAAA GCACCCCCCA ACATGGCAGC
ACATTTTCGG TCTCCATTCC CTTGACCCGC TACACCGCCC CTGTTCAAAC GGGTAAAGAG
AAAAAGCTGC AAGGGGTGAA CCTATCCATA CTCACAGATC ACCTTGTCCA AGGCATGCTC
TTTGAAGAGC AATTAACCCG CCACGGTGCC CATTCGCATC TATGCTTTAA TGGTCAATCC
ATCGCGGCGT GTTTTGCTGA AGAAAAGGAT ACCGACCTGC TTATCGTGCA TCATGATAAC
ACAAGTAAAA AGAAGCTATT ACAAGGGTTT GAGAAGTTTA AACAGGAGGT CACCGACTGC
AAGGCGAAAA TTCTCATCTG TGGCCGTTGT TACCAAAGAG ATGACATGGA AGCACTTGCC
GACAGGGGTG TCTCTATCTT CCCGGATTTT CACGATGAAG ATGAATTGAT TGATAAAATC
CAATCGGTGC TGGGTCTGCA CAAAAATAGA AAAAAGCCAG ACCCGCTCGA TGCGAAAAAA
CGGGTGTTGA TCGTCGATGA CAGTGAAGAT AACCGAGTCC TATTGTCCCA CTACCTGCGT
GATTATGCGT GTGAAATCAT TCAAGCTGTA GATGGTCACG AGGCGATTGA CACATACATC
GCCTCCAGAC ACTCACTGGA TCTGGTTCTA ATGGATCTAC AGATGCCCGG TCTGGATGGT
CTGAGTGCGA CCCAAAAGAT ACGGGCTTGG GAAAAAGCAC ATCGTGTTGC AAAAGTACCT
ATCGTTATCA TATCCGCACA TGCGACTGAA TCCCATAGAG ACGCCTCGCT TAATGCAGGG
AGTGATGCGT TTTTGAACAA ACCCATCCGC AAAAAAACCC TCAAACGGAT TGCCGCTCAA
TTTCTCCTGC ATGCCGAGCC TTGA
 
Protein sequence
MMELCPKILI VDDRPENLFA LHSILKVLRV EIIQAPSGND ALALANEHDF ALIYLDIDMP 
GMDGYEVARH LKSYDKTMNI PILFLTSAYH DEFHSLIAYH AGGIDYIEKP ICHEILLAKA
KLFLELYINR KKVERTNIIL QSEVLRRQAT ETAYRECESR HEAKRVFIAK MSHEFRTPMN
SMIGMLDMLE GTPLSEEQFE YIDSMRQATD HLTSMVGNLL DITQLEAGII KIKEKPFSLI
ALVKNVINII RPLAFKKKIL FIPYISPDIA PWFIGDANRL QQILVNLLGN AIKYTHWGSV
ALLISAKPVN SRYNVEFKVV DTGDGIDLEN QEKIFQAFVR GAYNNAETTE GTGLGLSICK
NLVDLMQGTI ELKSTPQHGS TFSVSIPLTR YTAPVQTGKE KKLQGVNLSI LTDHLVQGML
FEEQLTRHGA HSHLCFNGQS IAACFAEEKD TDLLIVHHDN TSKKKLLQGF EKFKQEVTDC
KAKILICGRC YQRDDMEALA DRGVSIFPDF HDEDELIDKI QSVLGLHKNR KKPDPLDAKK
RVLIVDDSED NRVLLSHYLR DYACEIIQAV DGHEAIDTYI ASRHSLDLVL MDLQMPGLDG
LSATQKIRAW EKAHRVAKVP IVIISAHATE SHRDASLNAG SDAFLNKPIR KKTLKRIAAQ
FLLHAEP