Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_3693 |
Symbol | |
ID | 4480973 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 4635535 |
End bp | 4637538 |
Gene Length | 2004 bp |
Protein Length | 667 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 639724449 |
Product | histidine kinase |
Protein accession | YP_867584 |
Protein GI | 117926967 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGGAGC TGTGTCCAAA AATTTTGATC GTCGATGACC GCCCAGAAAA TTTATTTGCC CTCCATTCAA TCTTAAAAGT GCTCCGTGTT GAGATCATCC AAGCTCCCTC TGGAAATGAC GCCTTGGCCC TGGCCAATGA GCATGACTTT GCCTTAATTT ATCTGGATAT AGACATGCCA GGGATGGATG GGTATGAGGT TGCTCGTCAC CTGAAATCCT ATGATAAGAC CATGAATATT CCTATCCTCT TTCTCACCTC GGCTTACCAT GATGAGTTCC ATAGTCTGAT TGCCTATCAC GCCGGTGGCA TCGACTATAT TGAAAAACCC ATATGCCATG AAATCCTACT TGCCAAAGCC AAACTATTTT TAGAACTCTA CATCAACCGC AAAAAGGTTG AGCGAACCAA TATCATCCTC CAAAGCGAGG TCCTCAGACG CCAAGCGACC GAAACGGCCT ACCGGGAATG TGAATCCAGG CATGAGGCAA AGAGGGTTTT TATCGCCAAA ATGAGTCATG AATTCCGCAC GCCGATGAAC AGCATGATCG GCATGTTAGA TATGCTAGAG GGCACACCAT TGTCTGAAGA GCAGTTTGAA TACATCGACT CAATGCGCCA AGCAACGGAC CACCTAACCA GTATGGTTGG TAATCTTCTT GATATTACCC AGTTGGAAGC AGGAATTATC AAAATCAAAG AAAAACCCTT TAGCCTCATA GCCTTGGTCA AGAATGTCAT CAATATTATT CGACCATTGG CCTTTAAGAA AAAGATTCTT TTTATTCCCT ATATCTCGCC TGACATTGCG CCTTGGTTTA TTGGTGATGC CAATCGTCTT CAGCAAATCC TGGTCAATCT ACTGGGCAAT GCCATCAAAT ATACCCACTG GGGCAGTGTG GCGCTGCTGA TCTCTGCAAA GCCTGTAAAC TCTCGTTATA ACGTTGAATT TAAAGTGGTT GATACAGGAG ATGGCATCGA TTTAGAGAAT CAGGAGAAGA TTTTTCAGGC TTTTGTCCGT GGTGCCTACA ATAACGCTGA AACCACCGAG GGGACGGGAC TTGGCTTGTC GATTTGTAAA AATCTCGTCG ATCTGATGCA AGGAACCATC GAACTCAAAA GCACCCCCCA ACATGGCAGC ACATTTTCGG TCTCCATTCC CTTGACCCGC TACACCGCCC CTGTTCAAAC GGGTAAAGAG AAAAAGCTGC AAGGGGTGAA CCTATCCATA CTCACAGATC ACCTTGTCCA AGGCATGCTC TTTGAAGAGC AATTAACCCG CCACGGTGCC CATTCGCATC TATGCTTTAA TGGTCAATCC ATCGCGGCGT GTTTTGCTGA AGAAAAGGAT ACCGACCTGC TTATCGTGCA TCATGATAAC ACAAGTAAAA AGAAGCTATT ACAAGGGTTT GAGAAGTTTA AACAGGAGGT CACCGACTGC AAGGCGAAAA TTCTCATCTG TGGCCGTTGT TACCAAAGAG ATGACATGGA AGCACTTGCC GACAGGGGTG TCTCTATCTT CCCGGATTTT CACGATGAAG ATGAATTGAT TGATAAAATC CAATCGGTGC TGGGTCTGCA CAAAAATAGA AAAAAGCCAG ACCCGCTCGA TGCGAAAAAA CGGGTGTTGA TCGTCGATGA CAGTGAAGAT AACCGAGTCC TATTGTCCCA CTACCTGCGT GATTATGCGT GTGAAATCAT TCAAGCTGTA GATGGTCACG AGGCGATTGA CACATACATC GCCTCCAGAC ACTCACTGGA TCTGGTTCTA ATGGATCTAC AGATGCCCGG TCTGGATGGT CTGAGTGCGA CCCAAAAGAT ACGGGCTTGG GAAAAAGCAC ATCGTGTTGC AAAAGTACCT ATCGTTATCA TATCCGCACA TGCGACTGAA TCCCATAGAG ACGCCTCGCT TAATGCAGGG AGTGATGCGT TTTTGAACAA ACCCATCCGC AAAAAAACCC TCAAACGGAT TGCCGCTCAA TTTCTCCTGC ATGCCGAGCC TTGA
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Protein sequence | MMELCPKILI VDDRPENLFA LHSILKVLRV EIIQAPSGND ALALANEHDF ALIYLDIDMP GMDGYEVARH LKSYDKTMNI PILFLTSAYH DEFHSLIAYH AGGIDYIEKP ICHEILLAKA KLFLELYINR KKVERTNIIL QSEVLRRQAT ETAYRECESR HEAKRVFIAK MSHEFRTPMN SMIGMLDMLE GTPLSEEQFE YIDSMRQATD HLTSMVGNLL DITQLEAGII KIKEKPFSLI ALVKNVINII RPLAFKKKIL FIPYISPDIA PWFIGDANRL QQILVNLLGN AIKYTHWGSV ALLISAKPVN SRYNVEFKVV DTGDGIDLEN QEKIFQAFVR GAYNNAETTE GTGLGLSICK NLVDLMQGTI ELKSTPQHGS TFSVSIPLTR YTAPVQTGKE KKLQGVNLSI LTDHLVQGML FEEQLTRHGA HSHLCFNGQS IAACFAEEKD TDLLIVHHDN TSKKKLLQGF EKFKQEVTDC KAKILICGRC YQRDDMEALA DRGVSIFPDF HDEDELIDKI QSVLGLHKNR KKPDPLDAKK RVLIVDDSED NRVLLSHYLR DYACEIIQAV DGHEAIDTYI ASRHSLDLVL MDLQMPGLDG LSATQKIRAW EKAHRVAKVP IVIISAHATE SHRDASLNAG SDAFLNKPIR KKTLKRIAAQ FLLHAEP
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