Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1646 |
Symbol | |
ID | 5539122 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 2126210 |
End bp | 2127385 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640893783 |
Product | response regulator receiver sensor signal transduction histidine kinase |
Protein accession | YP_001431756 |
Protein GI | 156741627 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0784] FOG: CheY-like receiver |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.930467 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0178265 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGACG CTGTGACCAT TCTCTATATC GAAGATAACC GCGATAATCA GTTGTTGGTG CGGCGCATTC TGGAGTCGCG CGGGTATGCG CTACAGATTT GCGAAGACGG ACCTTCCGGC ATTGCGTTGG CGCGAGAGAG CCAGCCGGCG CTCATTCTGG TCGATATCAA CATTGCGGGG ATGGACGGCT ATGAGACCAC AACGCGCCTG CGCAGTCTGC CTCATTTACA ATCGACGCCG ATTGTTGCCA TTACTGCTGA TGCGCGTCCT GGGACGCGCG AACGCGCGCT GGCTGCGGGA TGTGATGGGT TTATCACCAA GCCGATCGAT CCCCGCTTGC TCCCCGAACA GATTGCCGAG TTTCTGGGCG GGAAGCGTGA ACTGCTGCCC ACAAGCCTGG AGACGATCAT GCTGCGCGAG TATAATGCCA GGCTTGTCGA GCGGCTCGAG CGGCAGGTGC GCGAACTGAG CGCGCGCAAC GCTGAACTGC AAGAGCTTGA TCGTCTCAAG AACACCTTCC TTGCCACCCT TTCACATGAG TTGCGCACGC CGCTGACAGC GATCCTCGGT TACCTGGAAC TGTTCGAACG GCGCACCCTT GGATCGTTGA ACGACGTGCA GGGGCAGGCA ATCAACGTGA TTGCGCGCAA TGCCCGGACT CTGTCGCGCA TCCTCAACAA CCTGCTCTAC TTGCAAGAGG TGCGCTCGAC TGAAATCCGG CGCGCGCCGG TCGTCATCCA CGAGGTATTG CAGGAAGTCA TTGAAGACAT GCAACCGCTG GCGCGCGCTG CGAATGTGAC ATTGTCCGCG TCCCTTCAAC CGACTGCTGT GTACATGGGC GACCCGATTG GCATCAGCCA GGCATTGCGC GCCCTGATCG ACAACGCCAT TAAGTTCACT CCCCCCTCCG GGCGGGTGGA TGTGACCCTG ATCGATGAAC CGTCGCGGGT GTTAGTGCGC GTGGAAGACA CGGGGATCGG TATTCCCGCT GAAGCCCAGG AAAAGATTTT TCTCCCCTTC TATCAGATCG ATGACACGCT GGCGCGCCCC TACAGCGGCG CCGGGCTTGG TCTGGCAATC GCCAGGCATG TGGTCGAAGC GCATGGCGGT CATCTGACGG TGCGGAGCGT TGTTCAGGCT GGCAGCACCT TTACGGTTGT TCTGCCGCGG GAGTAG
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Protein sequence | MIDAVTILYI EDNRDNQLLV RRILESRGYA LQICEDGPSG IALARESQPA LILVDINIAG MDGYETTTRL RSLPHLQSTP IVAITADARP GTRERALAAG CDGFITKPID PRLLPEQIAE FLGGKRELLP TSLETIMLRE YNARLVERLE RQVRELSARN AELQELDRLK NTFLATLSHE LRTPLTAILG YLELFERRTL GSLNDVQGQA INVIARNART LSRILNNLLY LQEVRSTEIR RAPVVIHEVL QEVIEDMQPL ARAANVTLSA SLQPTAVYMG DPIGISQALR ALIDNAIKFT PPSGRVDVTL IDEPSRVLVR VEDTGIGIPA EAQEKIFLPF YQIDDTLARP YSGAGLGLAI ARHVVEAHGG HLTVRSVVQA GSTFTVVLPR E
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