More than 300 homologs were found in PanDaTox collection
for query gene Dbac_2855 on replicon NC_013173
Organism: Desulfomicrobium baculatum DSM 4028



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013173  Dbac_2855  response regulator receiver sensor signal transduction histidine kinase  100 
 
 
348 aa  707    Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_0483  response regulator receiver sensor signal transduction histidine kinase  35.38 
 
 
524 aa  213  4.9999999999999996e-54  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3547  response regulator receiver sensor signal transduction histidine kinase  35.38 
 
 
524 aa  213  4.9999999999999996e-54  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_0481  response regulator receiver protein  34.26 
 
 
523 aa  208  9e-53  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_0975  response regulator receiver sensor signal transduction histidine kinase  33.42 
 
 
383 aa  170  3e-41  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_004347  SO_3999  sensor histidine kinase  34.46 
 
 
310 aa  170  4e-41  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011146  Gbem_3274  response regulator receiver sensor signal transduction histidine kinase  33.42 
 
 
383 aa  169  8e-41  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_2370  response regulator receiver modulated metal dependent phosphohydrolase  54.05 
 
 
370 aa  162  9e-39  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_1794  periplasmic sensor signal transduction histidine kinase  39.3 
 
 
589 aa  161  1e-38  Magnetococcus sp. MC-1  Bacteria  decreased coverage  0.0000132214  normal 
 
 
-
 
NC_013173  Dbac_1030  histidine kinase  43.44 
 
 
261 aa  156  4e-37  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.975788  n/a   
 
 
-
 
NC_010814  Glov_0136  multi-sensor signal transduction histidine kinase  40 
 
 
665 aa  154  2e-36  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_1941  response regulator receiver sensor signal transduction histidine kinase  33.08 
 
 
395 aa  154  2.9999999999999998e-36  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.0596409  n/a   
 
 
-
 
NC_008709  Ping_0978  response regulator receiver modulated diguanylate cyclase  52.31 
 
 
322 aa  152  5.9999999999999996e-36  Psychromonas ingrahamii 37  Bacteria  normal  0.97362  decreased coverage  0.00116316 
 
 
-
 
NC_008700  Sama_2951  response regulator receiver protein  54.89 
 
 
340 aa  149  7e-35  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.129077 
 
 
-
 
NC_009092  Shew_3199  response regulator receiver modulated metal dependent phosphohydrolase  57.36 
 
 
339 aa  147  2.0000000000000003e-34  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_3544  response regulator receiver modulated diguanylate cyclase  52.76 
 
 
322 aa  147  3e-34  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.0106122 
 
 
-
 
NC_009901  Spea_0629  response regulator receiver modulated metal dependent phosphohydrolase  55.47 
 
 
339 aa  145  1e-33  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_2393  response regulator receiver sensor hybrid histidine kinase  30.68 
 
 
518 aa  145  1e-33  Magnetococcus sp. MC-1  Bacteria  normal  0.991201  normal  0.0787545 
 
 
-
 
NC_009665  Shew185_0836  response regulator receiver modulated metal dependent phosphohydrolase  51.43 
 
 
338 aa  144  3e-33  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_0871  response regulator receiver modulated metal dependent phosphohydrolase  51.43 
 
 
338 aa  144  3e-33  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_3504  response regulator receiver modulated metal dependent phosphohydrolase  51.43 
 
 
338 aa  143  4e-33  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0859  response regulator receiver modulated metal dependent phosphohydrolase  51.43 
 
 
338 aa  143  4e-33  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_2278  periplasmic sensor signal transduction histidine kinase  37.22 
 
 
357 aa  141  9.999999999999999e-33  Magnetococcus sp. MC-1  Bacteria  normal  0.530752  normal 
 
 
-
 
NC_008576  Mmc1_3072  response regulator receiver modulated metal dependent phosphohydrolase  49.67 
 
 
353 aa  141  1.9999999999999998e-32  Magnetococcus sp. MC-1  Bacteria  normal  hitchhiker  0.000480818 
 
 
-
 
NC_010676  Bphyt_5387  response regulator receiver sensor signal transduction histidine kinase  29.09 
 
 
375 aa  140  3e-32  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.0971839 
 
 
-
 
NC_013440  Hoch_6548  response regulator receiver sensor signal transduction histidine kinase  30.81 
 
 
397 aa  140  3.9999999999999997e-32  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.543575 
 
 
-
 
NC_010571  Oter_0959  response regulator receiver sensor signal transduction histidine kinase  32.48 
 
 
372 aa  139  4.999999999999999e-32  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_0860  response regulator  54.69 
 
 
339 aa  139  4.999999999999999e-32  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_3141  response regulator receiver modulated metal dependent phosphohydrolase  54.69 
 
 
338 aa  139  4.999999999999999e-32  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B1219  response regulator receiver sensor signal transduction histidine kinase  29.36 
 
 
375 aa  139  7e-32  Burkholderia xenovorans LB400  Bacteria  normal  0.745377  normal  0.599724 
 
 
-
 
NC_008576  Mmc1_3071  response regulator receiver protein  54.69 
 
 
390 aa  139  8.999999999999999e-32  Magnetococcus sp. MC-1  Bacteria  normal  hitchhiker  0.000442652 
 
 
-
 
NC_007298  Daro_3458  response regulator receiver  39.15 
 
 
365 aa  139  1e-31  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0962  response regulator receiver modulated metal dependent phosphohydrolase  51.11 
 
 
377 aa  138  1e-31  Acidovorax ebreus TPSY  Bacteria  normal  0.115091  n/a   
 
 
-
 
NC_008789  Hhal_0365  response regulator receiver modulated diguanylate cyclase  39.91 
 
 
308 aa  139  1e-31  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_0716  response regulator receiver modulated metal dependent phosphohydrolase  54.69 
 
 
338 aa  138  1e-31  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3306  response regulator receiver modulated metal dependent phosphohydrolase  54.69 
 
 
338 aa  138  1e-31  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3418  response regulator receiver modulated metal dependent phosphohydrolase  54.69 
 
 
338 aa  138  1e-31  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_0356  response regulator receiver modulated metal dependent phosphohydrolase  54.47 
 
 
360 aa  137  3.0000000000000003e-31  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_1044  response regulator receiver modulated metal dependent phosphohydrolase  51.11 
 
 
377 aa  137  3.0000000000000003e-31  Acidovorax sp. JS42  Bacteria  normal  normal  0.0516082 
 
 
-
 
NC_008576  Mmc1_3271  PAS/PAC sensor hybrid histidine kinase  28.8 
 
 
1691 aa  137  3.0000000000000003e-31  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_0135  response regulator receiver modulated diguanylate cyclase  39.58 
 
 
306 aa  137  4e-31  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.248217 
 
 
-
 
NC_012880  Dd703_3123  response regulator receiver modulated diguanylate cyclase  53.72 
 
 
312 aa  136  5e-31  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_2570  response regulator receiver sensor signal transduction histidine kinase  31.67 
 
 
381 aa  136  5e-31  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_1341  response regulator receiver modulated diguanylate cyclase  51.61 
 
 
319 aa  136  5e-31  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_3165  response regulator receiver modulated metal dependent phosphohydrolase  40.88 
 
 
367 aa  135  7.000000000000001e-31  Magnetococcus sp. MC-1  Bacteria  normal  0.0569095  normal  0.0154692 
 
 
-
 
NC_010623  Bphy_4207  response regulator receiver sensor signal transduction histidine kinase  29.64 
 
 
370 aa  135  9e-31  Burkholderia phymatum STM815  Bacteria  normal  normal  0.728065 
 
 
-
 
NC_009831  Ssed_2864  two-component response regulator  53.23 
 
 
383 aa  135  9.999999999999999e-31  Shewanella sediminis HAW-EB3  Bacteria  normal  0.384945  hitchhiker  0.000000030251 
 
 
-
 
NC_013173  Dbac_2032  response regulator receiver modulated diguanylate cyclase  48.85 
 
 
310 aa  135  9.999999999999999e-31  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_4229  response regulator receiver sensor signal transduction histidine kinase  29.5 
 
 
383 aa  135  9.999999999999999e-31  'Nostoc azollae' 0708  Bacteria  normal  0.599633  n/a   
 
 
-
 
NC_011138  MADE_03429  two-component system response regulator (hybrid family) protein  45.86 
 
 
358 aa  135  9.999999999999999e-31  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_1942  metal dependent phosphohydrolase  46.3 
 
 
363 aa  134  1.9999999999999998e-30  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.284574  n/a   
 
 
-
 
NC_011729  PCC7424_2188  response regulator receiver sensor signal transduction histidine kinase  30.05 
 
 
384 aa  134  1.9999999999999998e-30  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.00677544 
 
 
-
 
NC_011146  Gbem_1228  response regulator receiver modulated diguanylate cyclase  51.54 
 
 
349 aa  135  1.9999999999999998e-30  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_01756  Response regulator CheB (receptor modification enzyme, protein-glutamate methylesterase)  47.29 
 
 
337 aa  134  3e-30  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.844049  n/a   
 
 
-
 
NC_008609  Ppro_2062  response regulator receiver protein  46.48 
 
 
217 aa  134  3e-30  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_0650  response regulator receiver sensor signal transduction histidine kinase  31.18 
 
 
382 aa  133  3.9999999999999996e-30  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011883  Ddes_1054  response regulator receiver modulated metal dependent phosphohydrolase  54.47 
 
 
359 aa  133  5e-30  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_1577  response regulator receiver modulated diguanylate cyclase  35.1 
 
 
314 aa  133  5e-30  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_3790  response regulator receiver modulated diguanylate cyclase  50 
 
 
300 aa  132  6.999999999999999e-30  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_0007  response regulator receiver modulated metal dependent phosphohydrolase  45.58 
 
 
379 aa  132  9e-30  Dechloromonas aromatica RCB  Bacteria  normal  0.829613  normal  0.0284762 
 
 
-
 
NC_008321  Shewmr4_0481  response regulator receiver modulated metal dependent phosphohydrolase  45.58 
 
 
348 aa  132  9e-30  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_3549  response regulator receiver modulated metal dependent phosphohydrolase  45.58 
 
 
348 aa  132  9e-30  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_0479  response regulator receiver modulated metal dependent phosphohydrolase  52.03 
 
 
350 aa  131  1.0000000000000001e-29  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_1740  response regulator receiver sensor signal transduction histidine kinase  29.28 
 
 
377 aa  130  2.0000000000000002e-29  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.129887 
 
 
-
 
NC_011884  Cyan7425_4555  response regulator receiver sensor signal transduction histidine kinase  32.08 
 
 
406 aa  131  2.0000000000000002e-29  Cyanothece sp. PCC 7425  Bacteria  normal  0.330139  normal  0.677797 
 
 
-
 
NC_009092  Shew_0981  response regulator receiver protein  48.03 
 
 
155 aa  131  2.0000000000000002e-29  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0629  response regulator receiver sensor signal transduction histidine kinase  30.91 
 
 
382 aa  131  2.0000000000000002e-29  Acidovorax ebreus TPSY  Bacteria  normal  0.67365  n/a   
 
 
-
 
NC_009012  Cthe_1826  response regulator receiver sensor signal transduction histidine kinase  28.36 
 
 
363 aa  130  3e-29  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_0065  response regulator receiver protein  52.5 
 
 
305 aa  130  3e-29  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_2946  response regulator receiver modulated serine phosphatase  48.94 
 
 
384 aa  130  3e-29  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_50640  response regulator with metal dependent phosphohydrolase activity (two-component)  50.75 
 
 
347 aa  130  4.0000000000000003e-29  Azotobacter vinelandii DJ  Bacteria  normal  0.121542  n/a   
 
 
-
 
NC_010571  Oter_0809  response regulator receiver sensor signal transduction histidine kinase  30.83 
 
 
367 aa  129  6e-29  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_1562  response regulator receiver Signal transduction histidine kinase  30.03 
 
 
369 aa  129  7.000000000000001e-29  Anabaena variabilis ATCC 29413  Bacteria  normal  0.847548  normal  0.236297 
 
 
-
 
NC_008752  Aave_3993  response regulator receiver sensor signal transduction histidine kinase  31.02 
 
 
390 aa  129  7.000000000000001e-29  Acidovorax citrulli AAC00-1  Bacteria  normal  0.967169  normal 
 
 
-
 
NC_010623  Bphy_4530  response regulator receiver sensor signal transduction histidine kinase  30.28 
 
 
386 aa  129  7.000000000000001e-29  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_29300  Response regulator  51.09 
 
 
310 aa  129  8.000000000000001e-29  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_25160  response regulator  46.88 
 
 
356 aa  129  9.000000000000001e-29  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_011726  PCC8801_2743  response regulator receiver sensor signal transduction histidine kinase  29 
 
 
395 aa  129  9.000000000000001e-29  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_009439  Pmen_0836  response regulator receiver protein  43.75 
 
 
395 aa  129  9.000000000000001e-29  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_013161  Cyan8802_3359  response regulator receiver sensor signal transduction histidine kinase  29 
 
 
395 aa  129  9.000000000000001e-29  Cyanothece sp. PCC 8802  Bacteria  normal  0.361398  normal 
 
 
-
 
NC_010551  BamMC406_1236  response regulator receiver sensor signal transduction histidine kinase  29.44 
 
 
386 aa  129  9.000000000000001e-29  Burkholderia ambifaria MC40-6  Bacteria  normal  0.493129  normal 
 
 
-
 
NC_010506  Swoo_1513  response regulator receiver modulated diguanylate cyclase  35.9 
 
 
301 aa  129  1.0000000000000001e-28  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.0153071 
 
 
-
 
NC_009767  Rcas_3134  response regulator receiver protein  52.31 
 
 
200 aa  128  1.0000000000000001e-28  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_2455  response regulator receiver modulated metal dependent phosphohydrolase  50.82 
 
 
376 aa  128  1.0000000000000001e-28  Magnetococcus sp. MC-1  Bacteria  normal  0.46136  normal  0.292815 
 
 
-
 
NC_010571  Oter_1720  two component LuxR family transcriptional regulator  48.82 
 
 
301 aa  127  2.0000000000000002e-28  Opitutus terrae PB90-1  Bacteria  normal  0.162572  normal  0.616267 
 
 
-
 
NC_010571  Oter_3856  response regulator receiver sensor signal transduction histidine kinase  29.11 
 
 
378 aa  128  2.0000000000000002e-28  Opitutus terrae PB90-1  Bacteria  normal  normal  0.215089 
 
 
-
 
NC_008576  Mmc1_3408  response regulator receiver modulated metal dependent phosphohydrolase  49.64 
 
 
346 aa  127  2.0000000000000002e-28  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_3828  response regulator receiver sensor signal transduction histidine kinase  31.12 
 
 
392 aa  127  3e-28  Delftia acidovorans SPH-1  Bacteria  normal  0.287383  normal  0.140943 
 
 
-
 
NC_013161  Cyan8802_1510  response regulator receiver sensor signal transduction histidine kinase  27.12 
 
 
374 aa  127  3e-28  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_1483  response regulator receiver sensor signal transduction histidine kinase  27.12 
 
 
374 aa  127  3e-28  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011884  Cyan7425_0790  multi-sensor signal transduction histidine kinase  44.68 
 
 
566 aa  127  3e-28  Cyanothece sp. PCC 7425  Bacteria  normal  0.391268  normal 
 
 
-
 
NC_010814  Glov_3523  response regulator receiver modulated metal dependent phosphohydrolase  50.39 
 
 
363 aa  127  3e-28  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_2505  response regulator receiver modulated metal dependent phosphohydrolase  49.19 
 
 
331 aa  127  4.0000000000000003e-28  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_3111  response regulator receiver protein  50 
 
 
328 aa  126  5e-28  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.0637882 
 
 
-
 
NC_009523  RoseRS_2347  response regulator receiver protein  50.33 
 
 
202 aa  126  5e-28  Roseiflexus sp. RS-1  Bacteria  normal  0.56815  normal 
 
 
-
 
NC_008740  Maqu_3676  response regulator receiver modulated metal dependent phosphohydrolase  49.57 
 
 
328 aa  126  6e-28  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_1192  response regulator receiver modulated diguanylate cyclase  50.41 
 
 
316 aa  126  7e-28  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_0828  response regulator receiver modulated diguanylate cyclase  51.72 
 
 
324 aa  125  7e-28  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_2955  response regulator receiver modulated diguanylate cyclase  43.11 
 
 
308 aa  125  8.000000000000001e-28  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_4060  response regulator receiver modulated metal dependent phosphohydrolase  43.42 
 
 
365 aa  125  1e-27  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.0748941 
 
 
-
 
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