Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_0667 |
Symbol | |
ID | 5669084 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 788004 |
End bp | 788648 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641239594 |
Product | response regulator receiver protein |
Protein accession | YP_001505032 |
Protein GI | 158312524 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0467725 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.629252 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGAGC GGACCGGCGG TCCTGTCGAC ACCGAGGGCG CGTCGAACAC TGAGCGGCCC CGGAGCAAGA TCCTCCTGGT GGACGACCGA CCCGACAACC TGATGGCGCT GGAGGCGATC CTCGCCTCCC TGGACCAGGA TCTGGTGACC GCGTCCTCGG GCGAGGAGGC GCTCAAGCGC CTGCTCATCG ACGACTTCGC GGTCATCCTC CTCGACGTCC AGATGCCTGG AATGGACGGC TTCGAGACCG CGCACCGGAT CAAGCAGCGC GGGCGGACGC GGGACACTCC GATCATCTTC CTGACGGCGA TCGACCGCGA GCCGCACCAC GCCTTCCGGG GCTACGCGGT CGGCGCGGTG GACTACATCG CCAAGCCGTT CGACCCCTGG CTGCTGCGGG CCAAGGTGAG CGTCTTCGTC GAGCTGTTCG AGAAGAACGA GCGGCTGGCC GAGCTCGCCC ACCAGCGGGT GCGCGACTTC GACCTCATCA CCGAGGTCGC CGAGCGCCTG ATCGCGCTTG ACGTGCTCCT CGACGGCGCC GCGACGTCGA ACGAGGAGAC GCTCGCCGCC GCGAGCGCCG AGGTGCGCGG CCTGGTCTCG CGGCTGCGGC CCTTTGCGCG CTCGACGGGC GGCCAGCCCG AGTAG
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Protein sequence | MTERTGGPVD TEGASNTERP RSKILLVDDR PDNLMALEAI LASLDQDLVT ASSGEEALKR LLIDDFAVIL LDVQMPGMDG FETAHRIKQR GRTRDTPIIF LTAIDREPHH AFRGYAVGAV DYIAKPFDPW LLRAKVSVFV ELFEKNERLA ELAHQRVRDF DLITEVAERL IALDVLLDGA ATSNEETLAA ASAEVRGLVS RLRPFARSTG GQPE
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