Gene Meso_1944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_1944 
Symbol 
ID4182511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp2083487 
End bp2085010 
Gene Length1524 bp 
Protein Length507 aa 
Translation table11 
GC content59% 
IMG OID638067840 
Productsignal transduction histidine kinase 
Protein accessionYP_674502 
Protein GI110634294 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain
[COG3920] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0183597 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGTCGC CTGAAAACGT CAGGTTCCTG TTGGTGGACG ATGTCGACGA GAACCTTTTG 
GCTCTCGATG GGCTGCTGCG CCGGGATGGG CTCGAACTTT TCATGGCGCG TTCCGGTAGG
CAGGCGCTGG AAATGCTTCT GGTGCATGAC TTCGCCCTTG CCATTTTCGA CGTGCAGATG
CCGGAGATGG ACGGGTTTGA ACTCGCGGAG CTGATGCGCA GCACAGAGCG CACACGCAAT
GTGCCGATCA TATTCCTGAC CGCCGTCGCA ACGGACGAAA GGCGCCGCTT CCGAGGCTAC
GAGGCTGGAG CGGTCGATTA TCTGCTGAAA CCGGTCGATC CGCAGATCCT TCGCAACAAG
GCGGCCATTT TCTTCGAGCT AGCCCGCCAA CGCCAAGAAC TCGCGCGACA GCGGGACGAG
TTGAGCCGAA GCGCGGAGAA ACTGTCGAAA GCCCTCAGCG TATTACAGGC GCACAGCGAC
AACTCTCCTT TAGCCGTTGT CGAATTCGAC CCGAACTTCC GCTTCAACTC ATGGTCGAAG
AGCGCGCAGC GCATGTTCGG CTGGAGCGCT GAGCAGGTGC TCGGGCAGAA ATTGGTGGAA
CTGGGATGGC TACAGAGGGA AGACGTCGCG CGTTTGATGG ACGTGACGGG GGGAATCTTG
ACGGGAGGCG AGCCGGGAAG CGTCTTTGCG TGCCGGGTTT CCTGCCGCGA TGGCAGCGTT
ATCGACAGCG AGTGGTTCAT ATCGGTGCTT GCGGATCGGG GTGGCGCCGT AATGTCGGTC
AATGCGCAAA TACTGGACGT GACAGAACGC AACCGTGCGG AGGCGACGCG GCAGCTGCTT
ATCGGTGAGC TTAATCACCG CGTGAAAAAT ACGCTTTCCA CTGTGCAGGC GATCGCCAGC
CAAACCTTGC GCCACATGGA AAGCCCGGAG GATTTCAAGG CCAGCTTCAT GGCCCGTCTG
GAGTCATTGG CACGCGCTCA TTCGCTGCTT AGCGAGGCGA ATTGGGAGGG GGCCTATCTG
ACCAAGCTTG TTCAAGATCA GCAGCAACTG AATCTCATAG AGGAAGACAA GTTTGCGGTT
TCGGGCCCTG AGGTACATCT TCCTCCGCAG CTGGCGCTGC ATCTTGGGCT GATCTTGCAC
GAGCTTACCA CCAATGCCCA GAAACATGGC GCTCTCGCCG CTCCACAAGG TCGCATTGCA
TTGAGCTGGG ATCTTGCGGG TAAGGCTTTG TGTGTCAGAT GGGTGGAGAG CGGGGTGGCG
CTCGCGAAAA CACCTTCGTC GCGAAGAGGT TTCGGCTCCA ATCTCATTCA ACGCAGCACC
TCCGCGGAGG GTGGCACCGC GCAGATGGCT TACAAGCCTG ACGGAATTTC CTGGGAGCTC
ACCTTCGCTC TCGCGCATCA CAACGCGTAT GCTTCCCCAA TAACAAGCAG AGCTCATCCG
GAGAGGATCC GCCGCAGCCC ACATCCCTAT GCCGGATCTT CCGATAAGAG CGAAATAGCA
CGGCCTGTGA CGAGCGCTGA ATAG
 
Protein sequence
MQSPENVRFL LVDDVDENLL ALDGLLRRDG LELFMARSGR QALEMLLVHD FALAIFDVQM 
PEMDGFELAE LMRSTERTRN VPIIFLTAVA TDERRRFRGY EAGAVDYLLK PVDPQILRNK
AAIFFELARQ RQELARQRDE LSRSAEKLSK ALSVLQAHSD NSPLAVVEFD PNFRFNSWSK
SAQRMFGWSA EQVLGQKLVE LGWLQREDVA RLMDVTGGIL TGGEPGSVFA CRVSCRDGSV
IDSEWFISVL ADRGGAVMSV NAQILDVTER NRAEATRQLL IGELNHRVKN TLSTVQAIAS
QTLRHMESPE DFKASFMARL ESLARAHSLL SEANWEGAYL TKLVQDQQQL NLIEEDKFAV
SGPEVHLPPQ LALHLGLILH ELTTNAQKHG ALAAPQGRIA LSWDLAGKAL CVRWVESGVA
LAKTPSSRRG FGSNLIQRST SAEGGTAQMA YKPDGISWEL TFALAHHNAY ASPITSRAHP
ERIRRSPHPY AGSSDKSEIA RPVTSAE