Gene Psyr_4439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4439 
Symbol 
ID3369979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5305442 
End bp5306572 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content59% 
IMG OID637654799 
Productsensor histidine kinase 
Protein accessionYP_237507 
Protein GI66047666 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTTT CCGAATTCAT CGTTATTCAT GTGGATCGCA TCGTCGATGA ATGGGAAGCC 
TTCGCCAGAA CCCTGAAACC TGCGGCAGAA ACGATGACCA AGGCCGAGTT GCGGGATCAT
GCCAGGTCGA TTTTGCTCGC CGCCGCACGG GACATGAAGA CCGCGCAGAG CAAAAGCGAA
GAGATTGCCA AGGCCAGAGG CGAAGAGCTG AACAAGACGC CAAGCCTGGA TGAAGCAGCC
AGCAGCCATG GCGAGTTGCG CCACGAGGTC GGTTTTGATC TGGTGCAGAT GACGTCGGAG
TTTCGCCATC TGCGCGCCAG CGTCATCCGC CTCTGGGTAG AAAGCCTGGC AGCGCCGCAA
CTGGCTGATT TTCAGGACGT GATTCGCTTC AACGAAGCCA TCGACGAGGC GCTTGCCGAA
TCCACCGCAG CCTATGCGGA ACGGGTTGGC CGCTCACGGG ATATCTTTCT TGCCATTCTC
GGTCACGATC TGCGCGCACC GCTGCAGGCC GTCAGCATGT CCACCGAGTT GCTGGCACGC
AAAATAACGC TGGACGAAAA AACCCAGTCC TATGTTTCAC GTATCCAGAC CAGCACCCGC
CATATGGGCT CGATGGTCAG CGATCTGCTG GAGTTCGTAC GCAGTCGTCT GGGCGCCGGG
CTGCCGGTGG AACGCAAATA CATGGACCTG GCCAGCGCCT GTCGCGAGGC GATCGAAGAA
GCCTGTGCAG GGCGACCGGA CTCTGCTCCG GTGCTGAACA TAGAAGGCAA CACCAAGGGC
CACTGGGATG CCGGGCGGAT CAGCCAGATG CTGCAGAACC TGATCGGCAA TGCCCTGCAG
CATGGTGCGG CCAGTCACGA GATAACGGTG ACAGTCACGG GCGCCGAGAA AGCCGTGATA
TTGGTGGTAC ACAACGAAGG CAAACCGATT GCCGAAGACG CTATCGGGAC GATTTTCGAT
CCGCTGGTGC GCAGCACCGA GGAAAACAGC GAAACACGCG GCACGTCGAC CAGCCTGGGC
CTGGGCCTGT TCATCGTCAA GGAAGTGGTC AACGCCCACG GCGGCAGCAT CACTGTGACC
TCGACCATTG GTGAGGGCAC GACCTTCAAT GTGGTGCTGC CGAAAAACTG A
 
Protein sequence
MRLSEFIVIH VDRIVDEWEA FARTLKPAAE TMTKAELRDH ARSILLAAAR DMKTAQSKSE 
EIAKARGEEL NKTPSLDEAA SSHGELRHEV GFDLVQMTSE FRHLRASVIR LWVESLAAPQ
LADFQDVIRF NEAIDEALAE STAAYAERVG RSRDIFLAIL GHDLRAPLQA VSMSTELLAR
KITLDEKTQS YVSRIQTSTR HMGSMVSDLL EFVRSRLGAG LPVERKYMDL ASACREAIEE
ACAGRPDSAP VLNIEGNTKG HWDAGRISQM LQNLIGNALQ HGAASHEITV TVTGAEKAVI
LVVHNEGKPI AEDAIGTIFD PLVRSTEENS ETRGTSTSLG LGLFIVKEVV NAHGGSITVT
STIGEGTTFN VVLPKN