Gene Fjoh_3355 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_3355 
Symbol 
ID5092961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp4014690 
End bp4015907 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content34% 
IMG OID644742780 
Productresponse regulator receiver sensor signal transduction histidine kinase 
Protein accessionYP_001195688 
Protein GI146301097 
COG category[T] Signal transduction mechanisms 
COG ID[COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTATTAA TTGTAGATGA TATCAAGGCA AATATTATTG CCTTAAAGAA AACATTAGAA 
TTGCACGACA TTGACGTAGA TACTGCCGAA TCTGGAGAAG AAGCGCTGAA AAAAATATTA
AAAACAAACT ACTGTCTTAT TATTATGGAC GTACAAATGC CGGGACTTGA CGGCTTTGAA
GTAGTTAAAA TTCTCTCAGG TAATAAACGA ACAAAAGATA TTCCTGTAAT TTTTCTTTCA
GCTTTAAATA TTGAAAAGAA ATACATTTTT AAAGGATATG AAACCGGAGC CGTAGAATAT
ATTACAAAAC CGGTTGATAC TGATTTGCTG ATGCTTAAAG TAAAGACTTT CCTTAAAATT
TACGAACAGC AGAACGAACT AAAACTTACC AAAGAACTTC TTTCTAAAGA AATCAAAATT
AGAAAAGAAG CACAAGACAA TCTCGAAATC AAAATCGCCG AAAGAACCAA AGAACTGGTT
TTAAAAAACG AAGAATTAGA GATGAAAAAC CACGAATTGC AGCAGTTTGC CTGGGTGGTG
TCGCACGACT TAAACGAACC TATACGGAAA ATCCAGATTT TTATTAAAAT AATTAAAGAA
CTCTATCTCA AAGAAGATGA TAAGGGTATT GATTATGTCA ACCGAACAAT AAAATCAGCA
GAGAGAATGC AGACTTTAAT TACAGATCTT CTGGCTTATT CTCGTTTATC TGCACAGGTT
AAACCTGAAG TTACAGATTT AAATATCGTT TTGCAGGAAG TCCTTTCTGA TTTTGATTAT
TTAATTGAAA GAAAAAATGC AACTGTAAAA ACAACCGAAC TTCCAACCAT AGATAGTATT
CCAAGCCAGC TAAGACAGGT GTTTCAGAAT CTTATAGGAA ATGCACTCAA ATTCTCCGGA
GCAAATGAAC CTCCATTCAT CGAAATAACT TCAGAATTAA TTGTCGACAA ATCGTTTGAC
AGCCCGACTT CTCCGGAAGG TAAATACTGC AGGATTATTG TAAAAGACAA CGGAATTGGC
TTTGATGAAA TTTATCTCGA CAGGATTTTT ATCATTTTTC AAAGCTTAAA CGACCGTCAG
ACTTATGAAG GAACCGGAAT TGGTCTTGCA ATTGCAAAAA AAATCATCGA AAAACACAAC
GGATTAATAA CCGCAAGGAG TGAAGTAGGC AAAGGCGCGA GCTTTATAAT TATTCTTCCT
TTAAAATACG AAAAATAA
 
Protein sequence
MVLIVDDIKA NIIALKKTLE LHDIDVDTAE SGEEALKKIL KTNYCLIIMD VQMPGLDGFE 
VVKILSGNKR TKDIPVIFLS ALNIEKKYIF KGYETGAVEY ITKPVDTDLL MLKVKTFLKI
YEQQNELKLT KELLSKEIKI RKEAQDNLEI KIAERTKELV LKNEELEMKN HELQQFAWVV
SHDLNEPIRK IQIFIKIIKE LYLKEDDKGI DYVNRTIKSA ERMQTLITDL LAYSRLSAQV
KPEVTDLNIV LQEVLSDFDY LIERKNATVK TTELPTIDSI PSQLRQVFQN LIGNALKFSG
ANEPPFIEIT SELIVDKSFD SPTSPEGKYC RIIVKDNGIG FDEIYLDRIF IIFQSLNDRQ
TYEGTGIGLA IAKKIIEKHN GLITARSEVG KGASFIIILP LKYEK