Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2715 |
Symbol | |
ID | 1184369 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 3013207 |
End bp | 3014388 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637394084 |
Product | sensor histidine kinase/response regulator |
Protein accession | NP_792521 |
Protein GI | 28869902 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.615592 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAAGTG AAATTCAGGC AAAACTGCTT ATCGTTGACG ATCTGCCGGA AAACCTGCTG GCGCTCGAAG CGCTGATCAA GCGTGCCGAT CGCATCGTCT ACAAGGCGCT GTCGGCGGAC GAGGCGCTGT CGCTGCTGTT GCAGCACGAA TTTGCCCTGG CCATCCTTGA CGTACAAATG CCCGGCATGA ACGGCTTTGA ACTGGCCGAG ATGATGCGCA GTACCGAAAA GACCAAGAGC ATCCCGATTG TGTTCGTCAG CGCCGCCGGT CGCGAACTCA ATTACGCCTT CAAAGGCTAT GAAAGCGGCG CAGTGGACTT CTTGCACAAG CCCCTGGACA TTCATGCGGT CAAGAGCAAG GTCAACGTGT TCGTTGATCT GTATCGGCAG CGCAAGGCGA TGAAAATACA GGTCGAGGAG CTGGAACGCA GCCGCCAGGA GCAGGAGGTG TTGCTCAAAC GCCTGCAATC GACTCAGGGC GAGCTGGAGC ACGCGATTCG CATGCGTGAC GACTTCATGT CCATCGTCTC CCATGAGGTG CGCACGCCCC TCAATGGCCT GATTCTGGAA ACCCAGCTAC GCAAGCTGCA CCTGGCCAAG GACAACGAAT CGGCGTTTAC CATGGAAAAA CTGCGCGCCA TGGTCGATCG CGACGAGCGG CAGATTCAGA GCCTTATCCG CCTGATCGAA GACATGCTTG ATGTATCCAG GATCCGCACC GGCAAGTTGT CGATCAGGCC CAGCCCGTTC GATTTGAGCG AGTTGGTCAG TCAGTTGCTG GAAAGCTTCG CCGCGCAGAT CGCCGCCGCC AACTCCACCA TCAGACAGTT TGCCGACGGG CCGGTGATTG GCGTCTGGGA CGAGTTTCGC ATCGAGCAGG TGGTCGCCAA CCTGCTGACC AACGCGCTGC GCTATGGCGC GCGCAAGCCG ATCGAAGTGC ATGTGTACAG CAAGGAAGCC GAGGCTTTCA TCGAGGTCAG GGATCAGGGC ATCGGTATTA CCGCTGAAAA CCAGAAGCGC ATCTTTCAAC AGTTCGAGCG GGTCACGAGC AATCATGCGG TCGCCGGGCT GGGCCTGGGG CTGTTTATTT CCGAGCAGAT CGTCATGGCG CATGGCGGCC GTATCGAGGT GGAAAGTGAA GAGGGCCAGG GCTCGGTGTT CCGGATTTGC CTGCCTTTGT GA
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Protein sequence | MLSEIQAKLL IVDDLPENLL ALEALIKRAD RIVYKALSAD EALSLLLQHE FALAILDVQM PGMNGFELAE MMRSTEKTKS IPIVFVSAAG RELNYAFKGY ESGAVDFLHK PLDIHAVKSK VNVFVDLYRQ RKAMKIQVEE LERSRQEQEV LLKRLQSTQG ELEHAIRMRD DFMSIVSHEV RTPLNGLILE TQLRKLHLAK DNESAFTMEK LRAMVDRDER QIQSLIRLIE DMLDVSRIRT GKLSIRPSPF DLSELVSQLL ESFAAQIAAA NSTIRQFADG PVIGVWDEFR IEQVVANLLT NALRYGARKP IEVHVYSKEA EAFIEVRDQG IGITAENQKR IFQQFERVTS NHAVAGLGLG LFISEQIVMA HGGRIEVESE EGQGSVFRIC LPL
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