More than 300 homologs were found in PanDaTox collection
for query gene Pnap_1070 on replicon NC_008781
Organism: Polaromonas naphthalenivorans CJ2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008781  Pnap_1070  response regulator receiver sensor signal transduction histidine kinase  100 
 
 
402 aa  821    Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.947697  normal  0.86399 
 
 
-
 
NC_010322  PputGB1_2145  response regulator receiver sensor signal transduction histidine kinase  62.78 
 
 
408 aa  482  1e-135  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.001377 
 
 
-
 
NC_007005  Psyr_2448  response regulator receiver:ATP-binding region, ATPase-like:histidine kinase A, N-terminal  61.64 
 
 
393 aa  484  1e-135  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.760608  hitchhiker  0.00120668 
 
 
-
 
NC_004578  PSPTO_2715  sensor histidine kinase/response regulator  60.87 
 
 
393 aa  478  1e-133  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.615592  n/a   
 
 
-
 
NC_010501  PputW619_2109  response regulator receiver sensor signal transduction histidine kinase  61.44 
 
 
408 aa  472  1e-132  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_3758  response regulator receiver sensor signal transduction histidine kinase  60.46 
 
 
408 aa  470  1.0000000000000001e-131  Pseudomonas putida KT2440  Bacteria  normal  normal  0.734482 
 
 
-
 
NC_012791  Vapar_2802  response regulator receiver sensor signal transduction histidine kinase  61.38 
 
 
406 aa  470  1.0000000000000001e-131  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_2649  response regulator receiver Signal transduction histidine kinase  59.08 
 
 
404 aa  464  9.999999999999999e-131  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.699737 
 
 
-
 
NC_009512  Pput_2005  response regulator receiver sensor signal transduction histidine kinase  59.8 
 
 
408 aa  467  9.999999999999999e-131  Pseudomonas putida F1  Bacteria  normal  normal  0.343751 
 
 
-
 
NC_007947  Mfla_2590  response regulator receiver sensor signal transduction histidine kinase  56.85 
 
 
405 aa  436  1e-121  Methylobacillus flagellatus KT  Bacteria  normal  normal  0.413696 
 
 
-
 
NC_009439  Pmen_0172  response regulator receiver sensor signal transduction histidine kinase  57.77 
 
 
395 aa  435  1e-121  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009507  Swit_5356  response regulator receiver sensor signal transduction histidine kinase  39.6 
 
 
377 aa  253  5.000000000000001e-66  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.940445 
 
 
-
 
NC_008752  Aave_3993  response regulator receiver sensor signal transduction histidine kinase  40.6 
 
 
390 aa  244  1.9999999999999999e-63  Acidovorax citrulli AAC00-1  Bacteria  normal  0.967169  normal 
 
 
-
 
NC_010002  Daci_3828  response regulator receiver sensor signal transduction histidine kinase  40.15 
 
 
392 aa  242  6e-63  Delftia acidovorans SPH-1  Bacteria  normal  0.287383  normal  0.140943 
 
 
-
 
NC_011992  Dtpsy_0629  response regulator receiver sensor signal transduction histidine kinase  39.09 
 
 
382 aa  242  7.999999999999999e-63  Acidovorax ebreus TPSY  Bacteria  normal  0.67365  n/a   
 
 
-
 
NC_011984  Avi_9098  bacteriophytochrome protein  39.55 
 
 
378 aa  242  1e-62  Agrobacterium vitis S4  Bacteria  normal  0.384054  n/a   
 
 
-
 
NC_013216  Dtox_3783  histidine kinase  36.01 
 
 
544 aa  241  1e-62  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.401083  normal 
 
 
-
 
NC_008782  Ajs_0650  response regulator receiver sensor signal transduction histidine kinase  38.21 
 
 
382 aa  236  4e-61  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_4207  response regulator receiver sensor signal transduction histidine kinase  35.5 
 
 
370 aa  229  4e-59  Burkholderia phymatum STM815  Bacteria  normal  normal  0.728065 
 
 
-
 
NC_011071  Smal_1740  response regulator receiver sensor signal transduction histidine kinase  35.9 
 
 
377 aa  224  2e-57  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.129887 
 
 
-
 
NC_013061  Phep_4249  ATP-binding region ATPase domain protein  34.69 
 
 
374 aa  223  4e-57  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B1219  response regulator receiver sensor signal transduction histidine kinase  34.61 
 
 
375 aa  222  9.999999999999999e-57  Burkholderia xenovorans LB400  Bacteria  normal  0.745377  normal  0.599724 
 
 
-
 
NC_010676  Bphyt_5387  response regulator receiver sensor signal transduction histidine kinase  34.26 
 
 
375 aa  218  2e-55  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.0971839 
 
 
-
 
NC_011884  Cyan7425_3767  response regulator receiver sensor hybrid histidine kinase  33.65 
 
 
587 aa  206  6e-52  Cyanothece sp. PCC 7425  Bacteria  normal  0.634012  normal 
 
 
-
 
NC_013440  Hoch_2075  response regulator receiver sensor hybrid histidine kinase  34.87 
 
 
572 aa  203  5e-51  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_0585  ATP-binding region ATPase domain protein  32.06 
 
 
528 aa  201  9.999999999999999e-51  Pedobacter heparinus DSM 2366  Bacteria  normal  0.215545  normal 
 
 
-
 
NC_013132  Cpin_2260  response regulator receiver sensor signal transduction histidine kinase  35.34 
 
 
361 aa  194  3e-48  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.208609  normal 
 
 
-
 
NC_008576  Mmc1_3693  histidine kinase  31.08 
 
 
667 aa  194  3e-48  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_2639  response regulator receiver sensor signal transduction histidine kinase  34.43 
 
 
396 aa  190  4e-47  Geobacter metallireducens GS-15  Bacteria  normal  0.136447  normal  0.717158 
 
 
-
 
NC_009012  Cthe_0286  response regulator receiver sensor signal transduction histidine kinase  30.83 
 
 
424 aa  189  7e-47  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.136894  n/a   
 
 
-
 
NC_009441  Fjoh_3355  response regulator receiver sensor signal transduction histidine kinase  30.88 
 
 
405 aa  181  1e-44  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_1498  GAF sensor signal transduction histidine kinase  39.62 
 
 
1070 aa  179  9e-44  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.308131  normal  0.537019 
 
 
-
 
NC_011891  A2cp1_3864  multi-sensor signal transduction histidine kinase  43.35 
 
 
592 aa  177  2e-43  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.130733  n/a   
 
 
-
 
NC_013440  Hoch_6238  histidine kinase  30.59 
 
 
519 aa  178  2e-43  Haliangium ochraceum DSM 14365  Bacteria  normal  0.547868  normal 
 
 
-
 
NC_011145  AnaeK_3781  multi-sensor signal transduction histidine kinase  43.35 
 
 
592 aa  177  2e-43  Anaeromyxobacter sp. K  Bacteria  normal  0.233259  n/a   
 
 
-
 
NC_007760  Adeh_2090  GAF sensor signal transduction histidine kinase  40.17 
 
 
763 aa  176  7e-43  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.163656  n/a   
 
 
-
 
NC_011891  A2cp1_1867  GAF sensor signal transduction histidine kinase  41 
 
 
763 aa  174  2.9999999999999996e-42  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_1788  GAF sensor signal transduction histidine kinase  39.57 
 
 
763 aa  173  3.9999999999999995e-42  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_3724  multi-sensor signal transduction histidine kinase  43.35 
 
 
592 aa  172  6.999999999999999e-42  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_2235  multi-sensor signal transduction histidine kinase  39.91 
 
 
716 aa  172  6.999999999999999e-42  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.530022  normal  0.014643 
 
 
-
 
NC_013132  Cpin_0324  response regulator receiver sensor signal transduction histidine kinase  30.48 
 
 
424 aa  171  2e-41  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.046409  normal 
 
 
-
 
NC_010571  Oter_3856  response regulator receiver sensor signal transduction histidine kinase  32 
 
 
378 aa  169  1e-40  Opitutus terrae PB90-1  Bacteria  normal  normal  0.215089 
 
 
-
 
NC_007760  Adeh_2805  multi-sensor signal transduction histidine kinase  42.02 
 
 
1070 aa  168  1e-40  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_2560  PAS/PAC sensor signal transduction histidine kinase  39.92 
 
 
518 aa  167  2.9999999999999998e-40  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.315276 
 
 
-
 
NC_009675  Anae109_3853  multi-sensor signal transduction histidine kinase  42.44 
 
 
591 aa  167  2.9999999999999998e-40  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_2142  histidine kinase  40.25 
 
 
502 aa  166  5e-40  Anaeromyxobacter sp. Fw109-5  Bacteria  decreased coverage  0.000590991  normal  0.0793761 
 
 
-
 
NC_011145  AnaeK_0395  multi-sensor signal transduction histidine kinase  36.42 
 
 
509 aa  164  2.0000000000000002e-39  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_3616  response regulator receiver Signal transduction histidine kinase  28.84 
 
 
393 aa  163  5.0000000000000005e-39  Anabaena variabilis ATCC 29413  Bacteria  normal  0.159723  normal  0.789101 
 
 
-
 
NC_014248  Aazo_0932  response regulator receiver sensor signal transduction histidine kinase  29.68 
 
 
374 aa  163  6e-39  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_2991  GAF sensor signal transduction histidine kinase  42.37 
 
 
1069 aa  162  9e-39  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_1722  GAF sensor signal transduction histidine kinase  37.83 
 
 
763 aa  162  1e-38  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.418059 
 
 
-
 
NC_007413  Ava_1562  response regulator receiver Signal transduction histidine kinase  29.6 
 
 
369 aa  162  1e-38  Anabaena variabilis ATCC 29413  Bacteria  normal  0.847548  normal  0.236297 
 
 
-
 
NC_011729  PCC7424_0500  response regulator receiver sensor signal transduction histidine kinase  31 
 
 
373 aa  161  2e-38  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011145  AnaeK_2900  multi-sensor signal transduction histidine kinase  43.53 
 
 
1069 aa  160  5e-38  Anaeromyxobacter sp. K  Bacteria  normal  0.095908  n/a   
 
 
-
 
NC_008254  Meso_1944  signal transduction histidine kinase  51.68 
 
 
507 aa  159  1e-37  Chelativorans sp. BNC1  Bacteria  normal  0.0183597  n/a   
 
 
-
 
NC_008576  Mmc1_3271  PAS/PAC sensor hybrid histidine kinase  28.23 
 
 
1691 aa  157  2e-37  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_010644  Emin_1198  response regulator receiver sensor signal transduction histidine kinase  30.3 
 
 
375 aa  157  5.0000000000000005e-37  Elusimicrobium minutum Pei191  Bacteria  normal  hitchhiker  0.00328285 
 
 
-
 
NC_009675  Anae109_0792  GAF sensor signal transduction histidine kinase  40.44 
 
 
592 aa  156  7e-37  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.389456  hitchhiker  0.00398352 
 
 
-
 
NC_013173  Dbac_0019  response regulator receiver modulated diguanylate cyclase  47.85 
 
 
341 aa  155  2e-36  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0416556  n/a   
 
 
-
 
NC_011145  AnaeK_3620  GAF sensor signal transduction histidine kinase  38.77 
 
 
401 aa  152  8.999999999999999e-36  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_2823  histidine kinase  37.29 
 
 
501 aa  151  2e-35  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_4608  multi-sensor signal transduction histidine kinase  31.87 
 
 
1645 aa  151  2e-35  Cyanothece sp. PCC 7425  Bacteria  normal  0.284957  normal  0.407853 
 
 
-
 
NC_011146  Gbem_3274  response regulator receiver sensor signal transduction histidine kinase  29.63 
 
 
383 aa  150  3e-35  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_4229  response regulator receiver sensor signal transduction histidine kinase  27.04 
 
 
383 aa  150  4e-35  'Nostoc azollae' 0708  Bacteria  normal  0.599633  n/a   
 
 
-
 
NC_007413  Ava_1561  response regulator receiver Signal transduction histidine kinase  30.37 
 
 
443 aa  149  7e-35  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.414952 
 
 
-
 
NC_007348  Reut_B4539  response regulator receiver:ATP-binding region, ATPase-like:histidine kinase A, N-terminal  30.03 
 
 
1152 aa  149  8e-35  Ralstonia eutropha JMP134  Bacteria  normal  0.329946  n/a   
 
 
-
 
NC_013440  Hoch_5118  integral membrane sensor hybrid histidine kinase  29.73 
 
 
837 aa  149  9e-35  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.657918 
 
 
-
 
NC_011145  AnaeK_0802  GAF sensor signal transduction histidine kinase  37.29 
 
 
587 aa  149  9e-35  Anaeromyxobacter sp. K  Bacteria  normal  0.773486  n/a   
 
 
-
 
NC_009675  Anae109_4211  PAS/PAC sensor signal transduction histidine kinase  37.13 
 
 
403 aa  148  1.0000000000000001e-34  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.108613  normal 
 
 
-
 
NC_011891  A2cp1_0806  GAF sensor signal transduction histidine kinase  37.29 
 
 
587 aa  148  1.0000000000000001e-34  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_0539  PAS/PAC sensor signal transduction histidine kinase  34.75 
 
 
383 aa  149  1.0000000000000001e-34  Anaeromyxobacter sp. K  Bacteria  normal  0.143908  n/a   
 
 
-
 
NC_011891  A2cp1_0535  PAS/PAC sensor signal transduction histidine kinase  34.75 
 
 
383 aa  149  1.0000000000000001e-34  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.175177  n/a   
 
 
-
 
NC_011884  Cyan7425_2570  response regulator receiver sensor signal transduction histidine kinase  28.21 
 
 
381 aa  147  5e-34  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_009670  Oant_4781  signal transduction histidine kinase  45.45 
 
 
356 aa  146  7.0000000000000006e-34  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.252184  n/a   
 
 
-
 
NC_010511  M446_5174  histidine kinase  35.19 
 
 
273 aa  145  8.000000000000001e-34  Methylobacterium sp. 4-46  Bacteria  normal  0.544896  normal  0.227088 
 
 
-
 
NC_013440  Hoch_3251  response regulator receiver sensor signal transduction histidine kinase  29.47 
 
 
418 aa  145  9e-34  Haliangium ochraceum DSM 14365  Bacteria  normal  0.35487  normal  0.0265543 
 
 
-
 
NC_007760  Adeh_0506  PAS/PAC sensor signal transduction histidine kinase  34.75 
 
 
383 aa  145  1e-33  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1623  PAS/PAC sensor signal transduction histidine kinase  36.52 
 
 
377 aa  145  1e-33  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.632325  n/a   
 
 
-
 
NC_011729  PCC7424_3765  multi-sensor signal transduction histidine kinase  40.46 
 
 
562 aa  145  1e-33  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.13531 
 
 
-
 
NC_007519  Dde_1941  response regulator receiver sensor signal transduction histidine kinase  29.52 
 
 
395 aa  144  2e-33  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.0596409  n/a   
 
 
-
 
NC_012918  GM21_0057  histidine kinase  29.93 
 
 
588 aa  144  2e-33  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000000000000185994 
 
 
-
 
NC_011146  Gbem_0065  histidine kinase  30.79 
 
 
578 aa  144  3e-33  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_0931  response regulator receiver sensor signal transduction histidine kinase  28.74 
 
 
446 aa  144  3e-33  'Nostoc azollae' 0708  Bacteria  normal  0.523505  n/a   
 
 
-
 
NC_011884  Cyan7425_4555  response regulator receiver sensor signal transduction histidine kinase  30.35 
 
 
406 aa  144  3e-33  Cyanothece sp. PCC 7425  Bacteria  normal  0.330139  normal  0.677797 
 
 
-
 
NC_011145  AnaeK_2237  PAS/PAC sensor signal transduction histidine kinase  36.71 
 
 
381 aa  144  3e-33  Anaeromyxobacter sp. K  Bacteria  normal  0.5102  n/a   
 
 
-
 
NC_011891  A2cp1_2325  PAS/PAC sensor signal transduction histidine kinase  37.02 
 
 
381 aa  143  5e-33  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.830525  n/a   
 
 
-
 
NC_009675  Anae109_2663  multi-sensor signal transduction histidine kinase  29.41 
 
 
979 aa  142  9.999999999999999e-33  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.366427 
 
 
-
 
NC_012918  GM21_0975  response regulator receiver sensor signal transduction histidine kinase  29.88 
 
 
383 aa  141  1.9999999999999998e-32  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009675  Anae109_2188  PAS/PAC sensor signal transduction histidine kinase  38.02 
 
 
413 aa  141  1.9999999999999998e-32  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.925316 
 
 
-
 
NC_007760  Adeh_0367  multi-sensor signal transduction histidine kinase  37.08 
 
 
507 aa  140  3e-32  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_6548  response regulator receiver sensor signal transduction histidine kinase  29.44 
 
 
397 aa  140  3.9999999999999997e-32  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.543575 
 
 
-
 
NC_011891  A2cp1_4275  multi-sensor signal transduction histidine kinase  35.1 
 
 
712 aa  140  3.9999999999999997e-32  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2563  multi-sensor signal transduction histidine kinase  35.83 
 
 
543 aa  140  4.999999999999999e-32  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_0134  histidine kinase  26.7 
 
 
547 aa  139  7e-32  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_0037  response regulator receiver sensor signal transduction histidine kinase  29.01 
 
 
387 aa  139  7e-32  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011729  PCC7424_1421  response regulator receiver sensor signal transduction histidine kinase  26.47 
 
 
404 aa  139  7.999999999999999e-32  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011729  PCC7424_1422  response regulator receiver sensor signal transduction histidine kinase  28.64 
 
 
361 aa  139  8.999999999999999e-32  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_010506  Swoo_1964  response regulator receiver sensor signal transduction histidine kinase  27.44 
 
 
427 aa  139  1e-31  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.00543356  normal  0.092514 
 
 
-
 
NC_007760  Adeh_0755  GAF sensor signal transduction histidine kinase  37.71 
 
 
588 aa  138  1e-31  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.452305  n/a   
 
 
-
 
NC_007912  Sde_0404  Signal transduction histidine kinase-like  35.02 
 
 
498 aa  139  1e-31  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
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