Gene Ava_1562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1562 
Symbol 
ID3681105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1922707 
End bp1923816 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content40% 
IMG OID637716902 
Productresponse regulator receiver Signal transduction histidine kinase 
Protein accessionYP_322080 
Protein GI75907784 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.847548 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.236297 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGTTG TGGAAAATAA TCAAATTGAT CGAATTTTGG CTGTTGACGA CACTAAAGAT 
AACCTGATTT TAGTGCAAAC AATTTTAGAA AGTGAAGGCT ATGAAATTGA TTTAGCCAGT
GATGGCATTT CAGCTTTGCA AAAAGTAGAA CAGTCGCCAC CGGATTTAAT CTTATTAGAT
GTAATGATGC CGGGGATGGA TGGTTATGAA GTGACACGAC GCATCCGCAA TAACCCAGCC
TTAAGTTATG TACCAATATT ATTGATTACA GCTTTTCACG AATCGAGTGT TGTGGAAGGT
TTGGACGTAG GCGCGGATGA TTTCATTCGC AAACCATTTG ATACAGATGA ACTATTGGCT
AGAGTGCGAT CGCTCCTACG TCTCAAGCAC AGTCTGGACG AACAAAAAAA AATGGCACGC
CAAAGGGAAG ACTTTGTGTC ACGCCTAACC CACGATTTAC GCACACCGCT AGTAGCAGCA
GATCGGATGT TGGACTTGTT TCAACAAGAA GCCTTTTGCA AAATTTCACC AGAAATGAAA
CAGGCGATCG CTGTCATGAT TCGCAGCAAC CAAAATTTGA TGCAAATGGT TAATACCTTA
CTAGAAGTTT ATCGCTTTGA AGCCGGTAAG AAAACATTAA ATTATGAAAG CTGCAACTTA
AAAGAAATCG CTCAAGAAGT GGTTAGCGAA CTCACAACTC TAACTAATGA AAAAGGTATC
GCCTTAAAAA TAGATAGCAC TCAGATAGAT AACTTAGGCG AAAAAGCAGG TGTAGTTATG
GGTGATACCC TCGAACTACG GCGCGTGTTG TACAACTTAG TAGCAAATGC CATCAAGTTT
ACAGACACTG GCGGCATTGA AATTCGCTTT TTTGAACCAA ATAATCATTG GTTAACGATC
GAAATTGAAG ATACTGGTTA TGGTATTGCT CCCGAAGACC AAGCGACCAT TTTTGAGCGA
TTTCGTCAGG GAAGAAATAA ACGCTCAGGT AGCGGTTTAG GTTTGCATTT ATCCAGTCGT
ATCGTTGAAG CGCACGAAGG TATGATTAGT TTGGTTTCTG AAGTAGGTAA AGGTAGTAAA
TTCACAGTCA AACTACCTAA AAATATTTGA
 
Protein sequence
MSVVENNQID RILAVDDTKD NLILVQTILE SEGYEIDLAS DGISALQKVE QSPPDLILLD 
VMMPGMDGYE VTRRIRNNPA LSYVPILLIT AFHESSVVEG LDVGADDFIR KPFDTDELLA
RVRSLLRLKH SLDEQKKMAR QREDFVSRLT HDLRTPLVAA DRMLDLFQQE AFCKISPEMK
QAIAVMIRSN QNLMQMVNTL LEVYRFEAGK KTLNYESCNL KEIAQEVVSE LTTLTNEKGI
ALKIDSTQID NLGEKAGVVM GDTLELRRVL YNLVANAIKF TDTGGIEIRF FEPNNHWLTI
EIEDTGYGIA PEDQATIFER FRQGRNKRSG SGLGLHLSSR IVEAHEGMIS LVSEVGKGSK
FTVKLPKNI