| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_4061 |
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| Symbol | |
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| ID | 5735919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 5186106 |
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| End bp | 5188763 |
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| Gene Length | 2658 bp |
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| Protein Length | 885 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641281212 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_001546821 |
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| Protein GI | 159900574 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.193403 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCCGCA ACTCGTCTTT TCGCATTTGG CTAACTCGTA TTCGTCCTCT AGCTTGGGCC
TTAGCTTGCT TTGCGCTCGT GCTCTTCGGC TACACCTTTA CCACCACGAT TCCGACGGAT
CGCCTGACGG TGATTGCGAG TATTTTGGGG GTAGCGGCGC TAGCCTTGCC ATGGTTGTTT
AATCCTGAGG GCGATTGGCG CGAGTTGCGC ACGCTGGGAA TTTTGGCCTT GCCCTTGAGC
GTGGCGATTC TCAGCGAGGG CTATAATACG GCGCTCTGGT CGGTGCTCTT GATTCCAGCG
ATTGCGATTC CGCAAATGTT GCCGCCGCGT TGGGCTTTTA GCGCAATTGC CTTGATGGTG
ATTGCTTGGG CGGTCAGCAA TGTGTTAGTT CCAGCTGTCG CGGTCGAAAC TGTGGCGATT
GAAGTTGGCT TGCGAAGTTT GGGCTTTGTG CTGGTGGCGA TTGCGGTGTG GTTGGCGGCT
CGACCACGTT TTGATTATCC GGCCATGCTG CCCGAAGCGC CAATTCGTCG TGCTACACGC
GCTGCTGAGC GCTTGCGTGG CTCGCTTAGC CCCGAAGAAA CTCTCGAAGA ATTAGCCAGC
GCCGCCAAAG CGTGCGGCCC GTTTATTTTC GCCAGCGCCT CAACCGTCGA TTGGCGGGCA
CGAGTGCTGC GTATGGCTGT GGCGATTGGG GGTAGTGGCC GCACCCTCGG CGCAACCGAA
ATGCTCTCAA TTCCATGGGA TGAAATTACG GTGTTGCTGC GCGATGATCG GCGCATTGGC
GATAATGCCT ATCTTGCCGA TTCGCTGCCC TTCCGCGATA TTGCTGGCGA ACACTATATG
CTGGTGCCAG TCCGCACTGC GACTGGCGAG ATTTGTGGTT TGCTGACGGT TGGCGATGAT
GACCCCAAAG CCCGCAAGCG CCTGACTGAA ACTGCGCCAT TGCTTGAATT ATTGGCTTCG
CAAGCCGCCG CTGTGCTCGA AAACGCGGCG CTCCAAAACA CGCTTGCCCA ACGAATCGAA
GCCACAACCG CCGAAATGGG CCGCACCGCC GAAGATGCAA TGCGGGCACG CACTCGGGCC
GAAAGCATGT ATCAGATTGT GCGGGCACTC AGCGGCACGC TCGAACCGCA GCCATTGCTT
GATCAAGCCC TGTTGTTGAT TGCCCAAGCT ACCCAAGCCG AGCGCGGCGG GATTATGTTG
ATCGATCATA AAAATGGGCG TTTGGCTTTC AGCACCAACC TTGATCGTAA TATCACCCGT
ACCGAGGCGA TTTCCTTGGA GCGTGGCCAA GGCTTGGCAG GCTGGGTTGT TGAGCATCGT
GCACCCGTGA TTATTCCCAA TACTGCCGAA GATAGCCGTT GGATGGTGCG CACCGATTAC
GACAAAAAAG GTCGTTCAGC GCTGGCCGTG CCGATGGAGC AAGATGGGCG AGTCGCTGGG
GTGATTGTGC TGATCAACAG CCGCATCAAT CACTTTACCC AAGAGCATAT TCAATTTGTG
CAGGTCATTG GCGATCAAGT GATGACAATG CTCAGCAATG TGCAGCTGTA TCGTGCCACG
ACCGAGCAAG CTCGCCGTTT GAGCCAAGCT CTTGAACAAC GTGAAGAAGA AGTTAGCCGT
AGTTTGGCAA TTGTACGTTC GATTGGCGAT GGTGTAGTGG TTGGCGATCG GGTTGGTCGG
ATTCGCTTGA TTAATCCGGC TGCCGAGCAA TTGCTGAATA TCGAAGCTGC TGAATGGTTG
GGCAAGCCCT TGATGAGCCT GCCTGGTGCG CCCGAGAGTG AGCCACGCCT GACCGAAAAG
CAAACCTACC AGCAATTTGA GCTAAGCGGG CGCATGATTC GCGCTTCGAG CACGCCAGTC
TTTACTTCGC AAAGCGAATG GCTGGGCAGT GTGGTGGTCT ATCACGATAT TACAGCGTCA
GAATTGGCTG ATCGCATGAA AACTGAGTTT GTGGCGACGG CCTCGCACGA ATTGCGTACC
CCATTGACCT CAATTAGCGG CTACATTGAT TTGCTGATGT TAAACACGCT TGGTCCCTTG
ACCGAGCAAC AACGCCAATT TTTGAGCGTG GTCAAGAACA ACATCGAACG TTTGAATGCG
ATTCTCAACG ATTTGCTCGA TGTTTCACGC ATCGAATCGG GCAAAGTGCG GTTGCAACGC
AAGCCAATTA ACCTTGATGA ACTGATTCAA TCAACAGTGA TGTCAATTCA TCAACAATGG
AGTGGCAAGC AAATTTCCTT GGCGCTCGAT GTGCCCGATG ATTTGCCGCC AATGATTGCC
GACCCCGAAC GCATGCGCCA GATCGTCACC AATTTGATCT CAAATGCCTA CAAATATACC
CGCGACGGCG GCAGAATTGA TGTTGTAGTC AGCAATGGCG GCGATTCGGT GACCTTAGCG
GTCAAAGATA GCGGCGTGGG CATCGCTGCT GATGATCAAA AGCATATTTT TACGCGCTTC
TTCCGCTCGG AAAACCCGCT CAAGGAGCAG GCTGGTGGCA CGGGCTTGGG CTTGAACATC
ACCAAATCGC TGGTTGAGCT GCACGGTGGC AAAATCTGGT TTGATAGCGA AGAAGGTCGC
GGCACAACCT TTAATGTCCA ACTGCCGGTC GGCGGCGATT CCGACTGGAC TCCCGCTTCA
TGGCTTGAAG GAGTGTAA
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| Protein sequence | MGRNSSFRIW LTRIRPLAWA LACFALVLFG YTFTTTIPTD RLTVIASILG VAALALPWLF
NPEGDWRELR TLGILALPLS VAILSEGYNT ALWSVLLIPA IAIPQMLPPR WAFSAIALMV
IAWAVSNVLV PAVAVETVAI EVGLRSLGFV LVAIAVWLAA RPRFDYPAML PEAPIRRATR
AAERLRGSLS PEETLEELAS AAKACGPFIF ASASTVDWRA RVLRMAVAIG GSGRTLGATE
MLSIPWDEIT VLLRDDRRIG DNAYLADSLP FRDIAGEHYM LVPVRTATGE ICGLLTVGDD
DPKARKRLTE TAPLLELLAS QAAAVLENAA LQNTLAQRIE ATTAEMGRTA EDAMRARTRA
ESMYQIVRAL SGTLEPQPLL DQALLLIAQA TQAERGGIML IDHKNGRLAF STNLDRNITR
TEAISLERGQ GLAGWVVEHR APVIIPNTAE DSRWMVRTDY DKKGRSALAV PMEQDGRVAG
VIVLINSRIN HFTQEHIQFV QVIGDQVMTM LSNVQLYRAT TEQARRLSQA LEQREEEVSR
SLAIVRSIGD GVVVGDRVGR IRLINPAAEQ LLNIEAAEWL GKPLMSLPGA PESEPRLTEK
QTYQQFELSG RMIRASSTPV FTSQSEWLGS VVVYHDITAS ELADRMKTEF VATASHELRT
PLTSISGYID LLMLNTLGPL TEQQRQFLSV VKNNIERLNA ILNDLLDVSR IESGKVRLQR
KPINLDELIQ STVMSIHQQW SGKQISLALD VPDDLPPMIA DPERMRQIVT NLISNAYKYT
RDGGRIDVVV SNGGDSVTLA VKDSGVGIAA DDQKHIFTRF FRSENPLKEQ AGGTGLGLNI
TKSLVELHGG KIWFDSEEGR GTTFNVQLPV GGDSDWTPAS WLEGV
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