Gene Gura_1221 details

Gene Information

• Locus tag: Gura_1221
• ID: 5164188
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter uraniireducens Rf4
• Kingdom: Bacteria
• Replicon accession: NC_009483
• Strand: -
• Start bp: 1440161
• End bp: 1442074
• Gene Length: 1914 bp
• Protein Length: 637 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 640548725
• Product: PAS/PAC sensor signal transduction histidine kinase
• Protein accession: YP_001229998
• Protein GI: 148263292
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG5002] Signal transduction histidine kinase
• TIGRFAM ID: [TIGR00229] PAS domain S-box

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTATCA AGCCCATTGG ATCCCCTCGA ACGAAGGCTA ACTTTATGCG GGCAAATCTT 
CTGAAACATT TCTTACGTAA AATGCGAGCC AAAGAGCGCA AGCAGATGGA AGAGGCTGAG 
AGTTATGCGC TCTTGCGTGT CATGTTCGAT CAGTCATCTT CATTAATAAG CGTATTGAAA 
CCGGATGGAA CTGTTCTGGA CATTAACTCT TCAGCTTTCG ATGTGATAGG AGGCACGAAA 
TCTGAAGCGA TCGGCAAACC TTTCTGGGAA ACTTTAGCCT GGGTTCATTC GCCTGAACTG 
CAAGAGCGGC TCCGCCAAGC CATCAAGTCT GCTGCCCAAG GCGAGTTCGT CAGTTTTGAA 
GCTACCCATC CAACTGCTGA TGGAAAGCTG ATTTACGTCG ATTTTTCGCT TAAACCGGTG 
AAGGATGATG ACGGAAATGT GGTCCTTCTG TTGCCGGAAG GACGCGACAT CACCAAACGC 
AGGGAGGCAG AAGAGGCTCT GCGGGAGGTC GCGGTCAAAT ACCGGATCGT CGCCGACAAC 
ACCTACAACT GGGAATTCTG GCTGAGCCCG GCAGACAGAT TCATTTACAC GTCGCCTTCC 
TGCCGGCGCA TCAGTGGTCA TGGGGCCGAA GAGTTCAATG CCGATCCCGG TTTGCTCCGG 
AGTATCATTC ACCCGGATGA CCGGCATCTT TGGACTGACC ACCGGCACGA TATCACCCAG 
ACCAAGGCCC TGGGCGAGCT CGAATTACGC ATCGTCCGTC CCGACGGAGA TATTCGCTGG 
GTCCACCATG TCTGCATCCC TGTTTTCGAC GACAACGGAA ATCATCTTGG CACACGGGGC 
AGCTTCTCGG ACATCACGGA ACGCAAACAG GCCGAGGAGA AAAACCTGCG GTTAGCGGTC 
ATGGTGGAGT CTTCCGATGA TGCGATCGTC GGTAAGACGC TTGATGGGAT AATCACCAGT 
TGGAATAGAG GCGCCGAAAA AATATTCGGT TACAGCGAGG ACGAAGTGCT CGGCAAACCG 
ATAACGATGC TGATCCCGGC TGAAAATGTA GATGAAGTGC TTCAGATGGA TGAAAGGCTC 
AGGCATGGAG AACACATCGA ACATTTCGAA ACCGTACGAA GGAGAAAGGA TGGGCAACTG 
ATTCACATGT CGCTTTCCTA TTCCCCTATC AGAGATGCGC AGGGAAGAGT AGTCGCCGTG 
TCGACCATAG GGCGCGACAT CACCGAGCGG AAAGAGATGG AGCAGATGAA GGACGAGATG 
ATTTCCGCCG TCAGCCATGA AATGCGCACC CCCCTTACCG CAATGCTGGG CTACACCGAA 
TTCATGCTGG ACAATGAGGT CCCCGCGGAC CAACAGAGGG AATACCTCCG GATCACCCTG 
CACGAATCCG AGAAACTGAA TGAGCTGATC GGCAATTTCC TCGACCTGCA GCGGTTAAGA 
TCCCGAAAGG AGACCGTCAC GTGGCGGCCA CTCCCCCTTC AACCGCTTCT GGAGGAAACC 
GTCGCCCTCT TCACACGGGT GTCGGAACGG CATCACATAA CCCTGGACTG TCCGTCCGAT 
CTCCCCCGGA TATGCGGCGA TAACAAGCAG CTCCGTCAGG TCTTCAACAA TCTCGTCTCC 
AATGCCGTGA AGTACTCCCC GAAGGGTGGA GCTGTCAGAG TGGCGGCACG CCGGGAAAAG 
GACTGTGTTG TCATCACCGT GAGAGACGAA GGGATAGGCA TTTCGCCGCA GGCTGTCGAG 
AGGATCTTCG AGAGATTTTA TCGCGTTAAC AACACCGCCT GCCGCGTATT CGGCGGAACC 
GGCCTGGGCC TTGCCCTCGT GCGGGAGATT GTCACGGCTC ATGGGGGGGA AGTATGGGTG 
GAAAGCACTC TCGGCAAGGG GAGCACGTTT TTTGTCTCTC TGCCGGTGGC ATGA 

 

Protein sequence

MFIKPIGSPR TKANFMRANL LKHFLRKMRA KERKQMEEAE SYALLRVMFD QSSSLISVLK 
PDGTVLDINS SAFDVIGGTK SEAIGKPFWE TLAWVHSPEL QERLRQAIKS AAQGEFVSFE 
ATHPTADGKL IYVDFSLKPV KDDDGNVVLL LPEGRDITKR REAEEALREV AVKYRIVADN 
TYNWEFWLSP ADRFIYTSPS CRRISGHGAE EFNADPGLLR SIIHPDDRHL WTDHRHDITQ 
TKALGELELR IVRPDGDIRW VHHVCIPVFD DNGNHLGTRG SFSDITERKQ AEEKNLRLAV 
MVESSDDAIV GKTLDGIITS WNRGAEKIFG YSEDEVLGKP ITMLIPAENV DEVLQMDERL 
RHGEHIEHFE TVRRRKDGQL IHMSLSYSPI RDAQGRVVAV STIGRDITER KEMEQMKDEM 
ISAVSHEMRT PLTAMLGYTE FMLDNEVPAD QQREYLRITL HESEKLNELI GNFLDLQRLR 
SRKETVTWRP LPLQPLLEET VALFTRVSER HHITLDCPSD LPRICGDNKQ LRQVFNNLVS 
NAVKYSPKGG AVRVAARREK DCVVITVRDE GIGISPQAVE RIFERFYRVN NTACRVFGGT 
GLGLALVREI VTAHGGEVWV ESTLGKGSTF FVSLPVA