| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3365 |
|---|
| Symbol | |
|---|
| ID | 5736907 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 4243949 |
|---|
| End bp | 4246150 |
|---|
| Gene Length | 2202 bp |
|---|
| Protein Length | 733 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641280512 |
|---|
| Product | multi-sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_001546129 |
|---|
| Protein GI | 159899882 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTGCGAT GGGCTACGAT GAAATCATTA ATTGCGCATA AATTAAATCG TTGGTTCATG
CTAGCAGCAC TTGTGATTAT CGTCAATGGC CTCCTTTCGT GGCAATATCT CCAAACGATT
CAAGCCAATA ATGCTAGTGT GATCGAATCG GAAACCATGA CCAATCGTTT GGATCGGCTG
TTATCGTTGT TGAAAGACGC TGAAACCGGC CAACGTGGGT TTATTATCAC TGGCAGCGAA
CAATATTTAG CTCCCTACCA AACCGCCCAA ACCGAACTCC CTAGCCTGCT TGCTGAGATT
GAAGCCTACA GCAGTCAACG CCCATTGTTT ATCGAACGCT TACCTGAGCT GAAAACCTTG
ATCGCTGAGC AGCAACAGGA GCTGAGCACG ACGATTGATT TGCGGCGCAG CCAAGGCTTT
GAAGCCGCCC AGGCGATTGT GCTGGAAAAT CAGGGCAAGC AGCACATGGA TAGCATTCGT
CAAATTATCG ATCAATTGCT TGATCGCGAA AATATTCGGG CGCTTGATAG AGCGGCTCAG
ACCAAACTCA ATGTGCAACG AGCAGGCCTT GCGCTGGCCT TTGCTACTTT GGTTGCCACA
GGCTTTGTGA TTGGCACAAT GGCCTTAACC GAGCGCGATG TGCGTCGCCG TGAGTTGGCT
GCCAACGAGT TGCGCAACCA GCGCGAATGG TTTGCAGTTA CCCTCGCTAG TATCGGCGAT
GCGGTGCTGA CCACCGATAT CGATGGCAAA ATTAGCTTTA TGAACCATAT TGCCACGACG
ATTACCGGCT GGCCTGAGCA ACAAGCGCTT GGTCAATCAA TTCATACAGT GGCAGCAATT
TTTGATCCAA TAACCAAGCA GGAGCTGGCC CATCCGGTCA ATACCGCTCT CGCACAGCGT
CAAATCGTCA CCTTGAGCAA TTCGGTGGTG ATGCGCCAAG GCAATGGCTA TGTGGCAATC
GAAGATAGCG CCGCGCCAAT TTACGACCGC GAACAGCAGG TGATTGGCGC GGTGATGGTT
TTTCGTGATG TAAGCGAACG CTATCGCGAT GAGTTTGGCC AACGCTTGTT ACGAACATTA
CATAATCGAT TGGCGGCGAC GATTGATTTA GCGCAAGTGC TAGAAACCAG CACTGCTGTG
CCAACTCCCA GTTTTAGCGC TGCCTGCGGT TTATATTTGC TGCTAGATGC CGATGAAGAG
CCTCTGAGCA GCTATAGCAG TGCCCATGAG CCATTGCTCA ATTGGCAGCA ACACCCAGCT
TTTGCCGCCG CGCTAGCTAA CAGCCAAGCC CAAATTATCG ATCAAGCCTT GCCTGAGCCA
TATCACTCGG CAATTATCAT CCCTTTTCGC GATCAACATC AGCTCAGCGG GGCAATCGTC
TTTTTGCACG ATCAACATCG ATTTGACCAA ATTGATGTTG AATTGGCCGA GGAGCTAAGT
CAGCGGATGG TCTTGGCGAT TGAGCAGGCC TATCTCTATC GTCAAGCCCA AAATGCTGTG
CGTTTGCGTG ATGTCTTTTT ATCGATTGCC TCGCACGAGT TGAAAAACCC ATTAACCACC
TTGCTTGGTC AATCGCAATT GAGTTTGCGC CGCCTAGAAC GACTGAATTT GGTCGATGAG
CGACTTCAGC GTTCGCTGCA AGCGATTGAA GCTCAGGCCA GCCGCATGAA TAAAATGGTG
ACCGCCTTGC TCGATGTTTC ACGCATCGAA ACAGGCCAGC TCGATATTCA GCATGATCAA
ATCGATTTGG CTCAGCTTTT ACAACAATTG GTCAACGATT TAGCCATCAC GATCGATCAT
CACCAGCTTA GTTACCACTG CACGAGCAGC CAGCCTATCC AAGTGGTGGG CGACCCAATT
CGCTTAGAGC AAGTATTTGT CAATTTGATC AACAATGCCA TGAAATATAG CCCCGAACAA
ACCGAAGTGC TGGTACGTGC TGATCGGAAT GCCCAACAAG CGATCGTCCA GATTCGCGAT
CATGGCATTG GCATTCCAGC AGAATCGATC CCCAACCTCT TTACCCGTTT TTATCGGGCC
AGCAATGCTG CGCGTAGCCA TGTAGCAGGG CTAGGCATTG GCCTATTTGT GGTCAAAGAA
ATTGTCGATC TGCATGGTGG CAGCATTGAA GTGAGCAGCC AAGTTGGCCA AGGTAGCCTG
TTCACGGTGT ATTTACCGCT GCAAACTGGA AATCCTCAAT AA
|
|---|
| Protein sequence | MLRWATMKSL IAHKLNRWFM LAALVIIVNG LLSWQYLQTI QANNASVIES ETMTNRLDRL
LSLLKDAETG QRGFIITGSE QYLAPYQTAQ TELPSLLAEI EAYSSQRPLF IERLPELKTL
IAEQQQELST TIDLRRSQGF EAAQAIVLEN QGKQHMDSIR QIIDQLLDRE NIRALDRAAQ
TKLNVQRAGL ALAFATLVAT GFVIGTMALT ERDVRRRELA ANELRNQREW FAVTLASIGD
AVLTTDIDGK ISFMNHIATT ITGWPEQQAL GQSIHTVAAI FDPITKQELA HPVNTALAQR
QIVTLSNSVV MRQGNGYVAI EDSAAPIYDR EQQVIGAVMV FRDVSERYRD EFGQRLLRTL
HNRLAATIDL AQVLETSTAV PTPSFSAACG LYLLLDADEE PLSSYSSAHE PLLNWQQHPA
FAAALANSQA QIIDQALPEP YHSAIIIPFR DQHQLSGAIV FLHDQHRFDQ IDVELAEELS
QRMVLAIEQA YLYRQAQNAV RLRDVFLSIA SHELKNPLTT LLGQSQLSLR RLERLNLVDE
RLQRSLQAIE AQASRMNKMV TALLDVSRIE TGQLDIQHDQ IDLAQLLQQL VNDLAITIDH
HQLSYHCTSS QPIQVVGDPI RLEQVFVNLI NNAMKYSPEQ TEVLVRADRN AQQAIVQIRD
HGIGIPAESI PNLFTRFYRA SNAARSHVAG LGIGLFVVKE IVDLHGGSIE VSSQVGQGSL
FTVYLPLQTG NPQ
|
|---|
| |