Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A2cp1_3864 |
Symbol | |
ID | 7297121 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
Kingdom | Bacteria |
Replicon accession | NC_011891 |
Strand | + |
Start bp | 4297997 |
End bp | 4299775 |
Gene Length | 1779 bp |
Protein Length | 592 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 643596673 |
Product | multi-sensor signal transduction histidine kinase |
Protein accession | YP_002494253 |
Protein GI | 220918949 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.130733 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCCGCCGA CTCCGGATCG CCGACGGCTC CTCGAACGGC TGGGCGCGCT GCTGGACGAC GCGGCGCGGA GGGGATCGCT CCCCGAGGCC GCCACGCTGC GCGACGGGCT GCGCACGCTC GCCGAGGACC AGGCGGTCGC CGAGGCGGTG GCGGACAGCG CCGGCACGCT GGTGGTGGTG CTCGATCGCG AGGGGCGCGT GGTCCGCTGG AACCGCACCT GCACGCGGGT GACCGGCTGG CGCGCGGGCG AGATCGTCGG CCGGCCGTTC TGGGACGTGC TGCTGCTGCC CGAGGAGCGC GACGGGATCC GCAAGGCGTT CTCGCGGATG CTCGCCCGGG ACTTCCCGAA CCAGCAGGAG GTGCACTGGC GCACCCGCGA CGGCGAGGCG CGCCTCATCG CCTGGTCCAA CGCCGCGCTG TTCGACGCCG CCGGCGAGGT GGACCGCATC GTCTCGACCG GCATCGACGT GACCGACCGC ACCCGGGCCG AGACGGCGCT GCGCCGGCAG GCGCGCCGGC TGGAGGCGCT GGCCGAGGCC TCCCGCGTGT TCGCGGCCGG GCTCGACTAC AAGACCACGC TCGACACCGT GGCGCGGCGG CTCTCCGAGC TCATCGGGGA CGGCGCGCTC ATCCGCGTGG TCTCCGAGGA CGGCGAGTGG CTGGTGCCGG TGGCCGTCTA CCACCCGTCC CCCGAGCGCG CCGCGCTGCG CCGCAGGGTG CTGCTCGCGT CCCCGCAGCG CACCGGCGAG GGCATCACCG CCGGCGTCCT CGCCTCCGGG AAGCCCCTGC GCATCCCGCA CCTCACCCGC GAGATCATCC GCAACGAGAT GAAGCCGGAG TACCTGCCCT ACCTCGAGGG CGTCTCCAGC CTGCTCATCG CGCCGCTGGA GCAGCGCCGC ACCGTGGTCG GGCACCTCAC GCTCATGCGC GACGCGGGCG GCGCCCCGTA CACCTCGGAG GACGAGGCGC TGCTCGAGGA CCTCGCCCAC CGGGCCGCGC AGGCGCTCGA GAACGCGCGG CTCTACGGCG AGGCGCAGGC GGCGGTGGCC GCCCGCGACG AGTTCCTCTC CATCGCCTCG CACGAGCTGC GCACCCCGCT CACCGCGCTG CGCCTCGCGC TCGAGAACAT GCGCCGGGTG GCGAGCCGCG AGGCGCTCGA GTCGCTCCCG GCCGCCTACG TCGAGCGCGT GCTCGCCACC GCCGAGCGGC AGGGGCAGCG GCTCGAGAAG CTGGTGGCCG CGCTGCTCGA CGTGTCGCGG ATCCACATGG GCCGGCTGGA GCTCGAGATC GAGGACGTGG ACCTCGGCCA CGCGGTGTCC GAGGCGGTCG CGCAGGTGGA GGACGAGGCG GCGCAGGCGG GCTCGCAGGT GACCGTGCAG GGGGAGCCGG TGCGCGGCCG CTGGGACCGG CTGCGCATCT CGCAGGTGGC GACGAACCTG CTCTCCAACG CGGTGAAGTA CGGGGCCGGC AAGCCGGTGG AGGTCTCGTT CGGCACGCGC GACGGGCGCG CGTACCTGCG GGTGCGCGAC CAGGGCATCG GCATCGACCC GGCCGACCAG CGGCAGATCT TCGAGCGCTT CGAGCGGGCG GTGTCGTCGC GCAACTACGG CGGGCTCGGG CTGGGCCTGT ACATCGTGAA GCGGATCGTG GAGGCGCACG GCGGGGCGGT CCGGGTCGAG AGCGCGCCGG GCGAGGGCGC CGCGTTCGAG GTGACGCTGC CGCTCCGGCC GGCCGTGCCG CTCCCGGGCG GCGAGGCCGC GCCGCCGGTG CAGCACTGA
|
Protein sequence | MPPTPDRRRL LERLGALLDD AARRGSLPEA ATLRDGLRTL AEDQAVAEAV ADSAGTLVVV LDREGRVVRW NRTCTRVTGW RAGEIVGRPF WDVLLLPEER DGIRKAFSRM LARDFPNQQE VHWRTRDGEA RLIAWSNAAL FDAAGEVDRI VSTGIDVTDR TRAETALRRQ ARRLEALAEA SRVFAAGLDY KTTLDTVARR LSELIGDGAL IRVVSEDGEW LVPVAVYHPS PERAALRRRV LLASPQRTGE GITAGVLASG KPLRIPHLTR EIIRNEMKPE YLPYLEGVSS LLIAPLEQRR TVVGHLTLMR DAGGAPYTSE DEALLEDLAH RAAQALENAR LYGEAQAAVA ARDEFLSIAS HELRTPLTAL RLALENMRRV ASREALESLP AAYVERVLAT AERQGQRLEK LVAALLDVSR IHMGRLELEI EDVDLGHAVS EAVAQVEDEA AQAGSQVTVQ GEPVRGRWDR LRISQVATNL LSNAVKYGAG KPVEVSFGTR DGRAYLRVRD QGIGIDPADQ RQIFERFERA VSSRNYGGLG LGLYIVKRIV EAHGGAVRVE SAPGEGAAFE VTLPLRPAVP LPGGEAAPPV QH
|
| |