Gene Phep_4249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_4249 
Symbol 
ID8255385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp5126560 
End bp5127684 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content40% 
IMG OID644937915 
ProductATP-binding region ATPase domain protein 
Protein accessionYP_003094502 
Protein GI255534130 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATATTAA TAGTAGATGA TACCCCCGAG AACCTGATTT CATTAAAGAA GGTTCTGGAG 
AGACATAACT TTGAAGTTGA TACTGCATCA TCAGGCGAAG AAGCCTTAAA AAAAGTACTT
AAAAATGAAT ATGTACTGAT CATTCTGGAT GTTCAGATGC CCGGAATGGA TGGCTTTGAA
GTAGCAGAAG CAATTTCTGG CTATAGCAAG GCGAAAGAAA CAGCGATCAT CTTTTTATCT
GCAGCAAATA CAGAGCTTAA ATTTATTACC AAGGGCTATT CATCAGGTGG ACTGGATTAC
ATTACCAAGC CTGTAGATAT GGGGGTTTTA CTGTTAAAAG TGAAAACATT TTACCGGATT
TATGAACAGA GCCGGAAACT GATAGAAATA CAAAAAGCCT TGCTGGATGA AATTGAGTTC
AGAAAAATGG CAGAAAGGAA AAAGGATGAA TTTATCAGCA TTGCGAGCCA CGAATTAAAA
ACCCCGCTTA CCAGTGTTAA AGGTTATGTG CAGTTGCTGG GCAGGAGCGT AGATAAGGGA
GATATCCCTA CGGTAAAAAA ACACCTGGCC AAGGCGCAGG TACAGCTGGA AAAGTTAAAT
GAGCTGATTG CAGATTTGCT GGACATTTCA AAAATAGAAA GCGGAAAATT AAAGTTCAAC
AAAAAGTATT TTGTACTTGA TGCCTTGCTT GACGGGGTAT TGGAAGTGAT TCATCAGGCG
AACCCGACCT TCAACATCAT CAGAAAGGGG AATGCCCCAC AAGAAATTTA TGCAGATGAA
ATGCGCATTG AACAGGTAAT TGTTAATTTT TTAACCAATG CCATAAAATA TTCGCCGGGA
ACAAATGAGA TAGAAGTTAA TGTGAAGGTG GGAGAAGGCC AATTGTACCT TGGTGTCCGT
GATTTTGGGA TAGGTATAGC ACCTGAACTA CAAAAAAATG TATTTGAGAA ATTTTATAGG
GTAGAAGAAA CAGCAATTCA TTTTCAGGGG CTGGGTATAG GCTTATATAT TTCGGCCGAA
ATTATTAACA GGCATGGAGG AGAGGTAGGG GTGAAGAGCA AGCCCGGAGA GGGATCGGAG
TTTTATTTTA CCCTGCCGTT AAATGCTGTT CCTGAAGCAG ATTAA
 
Protein sequence
MILIVDDTPE NLISLKKVLE RHNFEVDTAS SGEEALKKVL KNEYVLIILD VQMPGMDGFE 
VAEAISGYSK AKETAIIFLS AANTELKFIT KGYSSGGLDY ITKPVDMGVL LLKVKTFYRI
YEQSRKLIEI QKALLDEIEF RKMAERKKDE FISIASHELK TPLTSVKGYV QLLGRSVDKG
DIPTVKKHLA KAQVQLEKLN ELIADLLDIS KIESGKLKFN KKYFVLDALL DGVLEVIHQA
NPTFNIIRKG NAPQEIYADE MRIEQVIVNF LTNAIKYSPG TNEIEVNVKV GEGQLYLGVR
DFGIGIAPEL QKNVFEKFYR VEETAIHFQG LGIGLYISAE IINRHGGEVG VKSKPGEGSE
FYFTLPLNAV PEAD