| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_3338 |
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| Symbol | |
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| ID | 8359504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 4102256 |
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| End bp | 4103836 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644965511 |
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| Product | response regulator receiver sensor signal transduction histidine kinase |
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| Protein accession | YP_003123006 |
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| Protein GI | 256422353 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.00782598 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATATTAA TTGTAGATGA TAAACCGGAA AACATCTTAT CCCTGCGAAA GGTCCTGGAA
TTGCATGATT TTGAAGTAGA TACGGCGTCC TCCGGTGAAG AAGCATTGAA GAAGATACTA
AGGAATAACT ACGCGCTCAT CATACTGGAT GTACAGATGC CCAGTATGGA CGGCTTTGAA
GTTGCAGAAA CCATTTCCGG CTATAGTAAA GCAAAGGATG TACCCATCCT TTTCCTGTCA
GCAGTCAATA AAGACAAAAA ATTTATTGCC AAAGGCTACG CCTCCGGCGG ATTGGACTAC
ATTACCAAAC CCGTCGATCC GGATATCCTG CTGATGAAGG TGAAAACCTT TATTCGTTTA
TACGAGCAAA ACAGGCAATT GCAGGTCATG CACGCCTCTC TCCAACAGGA AGTAGAGGTA
CGTAAACGTG CGCAGGCAGC TCTGAATGCC AAAGTACAGG AACAACATTC CATTCTTGAA
TCACTACCAC AGGTCGCCTT TACGGCCCGG GCGGATGGTG CGGTAGAATA TGCGAACCGT
TTCTGGTTCC ACTACTCTCC TTCCCTCGGA CAATTCCCTG TCACATACGA CCAGGAGCAG
GCGCCCATCT CGGTATGGGA ACATGCCATC AAAGCAGGCC TCCCGCTGGA GAAAGAAGTC
TATCTCCATC ACCGCCTGCA TAACCATTTC CGTTGCCACC TTCTCAGGGC GATCCCCCTG
GAAGAAGATG GCCAGATTGT GAAATGGGTA GGTACTTTCA CCGATATCGC CCATCAGAAA
CAGGCCAACG AAATACTGGA GCAAAGGGTG ATAGAACGTA CACACGAACT ACAGGAAATG
AATCAGGCCC TGGAAGCCAG TAACCACGAG TTACAGCAGT TTGCTTCCGT CGCTTCTCAT
GACCTGAAAG AACCACTGCG TAAAATACAG TTATTCGGTA CCATTCTGCG TGACCGTCAT
ATCGGGACCA ATCCCGATGC CATGCAATAT ATGGAGCGTA TCGTCAGTTC TTCAGAACGC
ATGACAAGGC TGATCAACGA CCTGCTGCGC TATTCCAGGC TTTCTGCCGA TGTCTCTTTT
GAACCGGTGA ACATCAATGT AATTATCAAA GAAATACTGG CTGACCTGGA ACTGTCTGTG
CGGGATGCCT GTGCAGAGAT CACCGCCAAT GAGTTTCCGG TATTGGAAGC CGTACCAGGA
CAAATCAGAC AGGCATTACA GAACATCATC AGCAATGCAT TAAAGTTCAG TCGCGAGGGA
GTAGCGCCCT GCATCCGGAT CCATGCGGAA CGTGTCGTGG AAAAGGAATT TGATAGTCAG
CCTGCTGAAG AAGGGGCCTA TTGCCGGATT ACCATCAGCG ATAATGGCAT CGGGTTTAAT
GAGCTGTATC TGCCAAAAAT CTTTACACTG TTCCAGCGAC TGCATAGCCA TGAAGTGTAT
GAGGGAACCG GTATCGGATT GGCCATCGCA AAGAAAGTGG TCGAAAGACA TCAGGGGATT
ATTGGGGCCA GCAGTAAGGA AAATGAAGGG GCTACGTTTA TCATCGTATT GCCATTGGAG
CAAAGGCAGA TGGTTAGTTA G
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| Protein sequence | MILIVDDKPE NILSLRKVLE LHDFEVDTAS SGEEALKKIL RNNYALIILD VQMPSMDGFE
VAETISGYSK AKDVPILFLS AVNKDKKFIA KGYASGGLDY ITKPVDPDIL LMKVKTFIRL
YEQNRQLQVM HASLQQEVEV RKRAQAALNA KVQEQHSILE SLPQVAFTAR ADGAVEYANR
FWFHYSPSLG QFPVTYDQEQ APISVWEHAI KAGLPLEKEV YLHHRLHNHF RCHLLRAIPL
EEDGQIVKWV GTFTDIAHQK QANEILEQRV IERTHELQEM NQALEASNHE LQQFASVASH
DLKEPLRKIQ LFGTILRDRH IGTNPDAMQY MERIVSSSER MTRLINDLLR YSRLSADVSF
EPVNINVIIK EILADLELSV RDACAEITAN EFPVLEAVPG QIRQALQNII SNALKFSREG
VAPCIRIHAE RVVEKEFDSQ PAEEGAYCRI TISDNGIGFN ELYLPKIFTL FQRLHSHEVY
EGTGIGLAIA KKVVERHQGI IGASSKENEG ATFIIVLPLE QRQMVS
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