| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0394 |
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| Symbol | |
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| ID | 8223960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 450931 |
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| End bp | 452526 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644928271 |
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| Product | response regulator receiver sensor signal transduction histidine kinase |
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| Protein accession | YP_003084828 |
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| Protein GI | 255034207 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.549141 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCTAA TTGTCGACGA CAGGCCGGAA AACATTCTAC CGCTTAAAAA AATCCTGGAA
CTCCACAATT TCAAAACGGA CACTGCCGGT TCGGGTGAGG AAGCTTTGAA AAAAGTCCTC
AAAACGACTT ATTCGGTGAT TATCCTGGAT GTGCAAATGC CGGGAATGGA TGGTTTCGAA
GTGGCGGAAG CCATTGCAGG TTTTGGAAAA GCGCGCGATA CGCCCATCAT TTTCCTGTCG
GCCGTTAATA AGGAAAAGAA GTTTATCACC AGAGGCTACA CATCGGGCGG GATCGATTAC
CTCACCAAGC CCGTCGACCC GGATATTCTT TTATTAAAAG TGAAAACATT CTACCGGCTT
TTTGAGCAGC AGCAGGAACT GAAAGCGATC CAGGAATCGC TGCGCCAGGA GATCGATACC
CGCAAGCATG CGCAGGAAGA ACTGGCGGCG CGAGCGGATG AGCTGCGTTT TATTCTCGAA
TCCCTGCCGC AAATCGCCTT CACGATCCGG ACCGACGGTA AGATTGAATA TGTAAACAAG
CATTGGTTCC AATATTCCCC CGACGCCGCC ACATTCCCGG AAACGCATCC CGACGACCGG
AGCTACGATC TTTGGAAAGA ACATTTCAAA AACAATTTCG AATTTTCGGT AGAAACCAGG
CTGAAACAAC TTGGATCGGG GCTATACCGG TATTTCCTGC TCAAAATCAT CCCTGTCCTG
CAAAATGGAA CGGTTGTACG CTGGGTGGGC ACTTTCACGG ACATTCATCA GCAGAAAATG
GCCAATGAGG TGCTGGAACA TAAGGTGGAG GTCCGTACCA AAGAACTTAC CGATAAAAAT
TCGGAGCTCG AAACGACCAA CCACGAGTTG CAGCAATTCG CCTGGGTGGT ATCGCACGAT
TTGAAGGAGC CGCTGCGTAA GATTCAGACA TTCAGCCATT TGATCAAGGA CAAATACCTG
ACCGGAAACG ACGAGGCAAT TTCTTATCTC AACCGGTCGA TCAGCTCTTC GGCGCGTATG
TCGCGGCTGA TCAGCGACCT GCTGGATTAT TCGCGCCTGT CGGTAACGGC GCATTTCCAG
CCTACCGACC TGAATGCGCT GGTGGAAGAG CTGCTCGCGG ATTTCGACGA AACCATTCGC
GAGAAACGGG GAAGCATCCG CAAAGATCAC CTCCCGGTAG TGGAAACGAT CCCGAGCCAG
ATCCGCCAGG TGTTTCAGAA CCTGATCAGC AATGCATTGA AATTTTCGAG ACCGGAGATC
GCACCGGTAA TTGATATATG CTACGAGACG ATCGGCGAGA AAGATGTCGA CGGCCCTGCA
TTGCCGGGCG GGCCCTATTG CAGGATCACG ATCGCAGACA ATGGCATCGG GTTCGACGAG
AAGTTCCTCG ACCGGATTTT CGTCATTTTC CAGCGGCTTA ATAATATGAA TGCTTACGAA
GGGACCGGCA TCGGCCTGGC AATCGCGAAG AAGATCATGG ATAAGCACAA TGGCCTCATA
TCCGCCCGGA GCATTGAAAA CCAGGGTTCC GAGTTTGTAC TTGTGCTGCC ATTCAGCCAG
GAGCACGTGC TGGCACCCAT TAAAACCGAT AATTAG
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| Protein sequence | MILIVDDRPE NILPLKKILE LHNFKTDTAG SGEEALKKVL KTTYSVIILD VQMPGMDGFE
VAEAIAGFGK ARDTPIIFLS AVNKEKKFIT RGYTSGGIDY LTKPVDPDIL LLKVKTFYRL
FEQQQELKAI QESLRQEIDT RKHAQEELAA RADELRFILE SLPQIAFTIR TDGKIEYVNK
HWFQYSPDAA TFPETHPDDR SYDLWKEHFK NNFEFSVETR LKQLGSGLYR YFLLKIIPVL
QNGTVVRWVG TFTDIHQQKM ANEVLEHKVE VRTKELTDKN SELETTNHEL QQFAWVVSHD
LKEPLRKIQT FSHLIKDKYL TGNDEAISYL NRSISSSARM SRLISDLLDY SRLSVTAHFQ
PTDLNALVEE LLADFDETIR EKRGSIRKDH LPVVETIPSQ IRQVFQNLIS NALKFSRPEI
APVIDICYET IGEKDVDGPA LPGGPYCRIT IADNGIGFDE KFLDRIFVIF QRLNNMNAYE
GTGIGLAIAK KIMDKHNGLI SARSIENQGS EFVLVLPFSQ EHVLAPIKTD N
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