| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3370 |
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| Symbol | |
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| ID | 8254489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4003888 |
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| End bp | 4006029 |
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| Gene Length | 2142 bp |
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| Protein Length | 713 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644937022 |
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| Product | PAS sensor protein |
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| Protein accession | YP_003093626 |
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| Protein GI | 255533254 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.277761 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAAA TCAACAAACC CTCCAAGGAC ACGCTTTCGG CGCTTGAAAC GGCGCCTAAT
ATGTATTTAA TTCTCTCTCC TGATCTGTAT ATCTTGACAG CAAGCGATTT ATACCTGCAG
GCCACAAAAA CGACGCGGGA TGCAATTAAA GGCAAACATA TTTTTGAGGC TTTTCCGGAC
AACCCAGATC TGCCAGATGC GGATGGTGTT CAGAATATAA ATGCATCACT TCAGGTGGTA
CTTCGCACTA AAAAACCAGA TCAAATGCCA ATACAGCGAT ATGATGTCCC CGATATGGAA
AACCCGGGCA AATTTATCCG GCGGTACTGG GACCCCTGCC ATTCACCTGT GCTGGACAGT
GAGGGTAATA TTTCTTATAT CATCCAGTTG GCTACCAATG TGACAGACAA AATACTGGCC
GAACGCGCTC TACATCAAAG TCATCTGGAA AATCTGGAAA CGACCGAACA GGTCAGCGCG
CTCAATGCTG AACTTCTTGC CACCAATGTC GAGTTACGGG AGACCCAGCG TCAGCTAACC
CTGTTGAACG AGCAGCTGGA GGGGCGTGTA GCCAAACGAA CGGATGAACT TCGGCAGGCC
GTAGAGGAGC AGGCGGCTGT TAATGAAGAG ATGGAGGCTA CAAACGAGGA GCTAATCCAA
ATCCAGCAAA ATCTGGAGCA AATCAACAGG GAGCTGACAG CCGGAGAATC ACGCTTCCGT
ATGGCTGTAG AATCGACAGG TCTGGGTACC TGGGATTATA TTCCGGCCAC GGGGGAACTT
CAATGGTCCA AAGAATGCCG GATGATATTC GGCCTTGATG GCGATCAGCC TGTGGATTTT
GAAACCTATA CGCGACACAT ATTTCCGGAA GACCGTCAAT TTGTAGCTTC CAGAATAAAT
TCCAGCCTTC AGTCTAAGTT TTCGGGCCGA TATGAAATCA CGCACCGGAT CATTCGTTTT
GATAATAAGG AGGTTCGTTG GGTAAAGGCG CAGGGTACGG TCCAGTTTCA GGCTGGAAAA
GCTTCACGGT TTTTAGGTAC TGTACTGGAT ATCACTGAGC TCAAACAGGT AGAAGAAAAA
AGTGCCAGGC TAGCAGCGAT TGTAGCCACA TCAAATGATG CTATTATAAG TAAGACCCTG
GAAAGTGTAA TCACCAGCTG GAATGATTCT GCGGAACGCA TGTTTGGTTA TACTTCGACT
GAGATAATAG GGGAAACTAT CTATAAGCTT ATACCAGCTG ACCGCCAGGA TGAAGAGCCG
ATGATCCTCA CGCGGTTAAA AGCAGGAGAG CGCGTAGAGC ACTTTGAGAC GAAAAGGCAA
ACCAAAGATG GCCGGCTGAT TGATGTTTCT CTTACGATAT CGCCCATCAA GGACAGCCAC
GGGAATATTA CTGGCTTCTC CAAGATAGCC CGGGATATCT CAGAACGCAA GCAGAATGAT
ATCCGCAAGA ATGACTTTAT CGCTATGGTC AGTCACGAAA TAAAAACGCC GCTTACCTCT
ATGAGCGCAA TCTTACAAAT GCTGCAGCGG AAGTTTGCTG AAAGTGAAGA TGTTCTGGTA
TCCCAGCTAC TGGACCGCGC GAATCTGCAG GTGAAAAAAA TGAATAAGAT GATCAGCGGC
TTTCTGAATA TCTCCAGATT GGAGTCTGGT AAGATTCAGA TCAACAGGCA AGTCTTTAAC
ATCTGCGAAC TGATCAAAGA GGTAGTTGCT GAAATCAATC TTACCGGCAT TAACCACATC
ATCAACATCC GGGAATGTGA AGATGCTGTA GTCATGGCGG ACCGGGAAAA AATAGATTCT
GTACTCAGTA ACCTTTTAGG CAATGCGATC AAATATTCTC CCAAAGGCTC CGAGGTTACC
ATAGATTGCT ATAAACAGGA TTCATATGTG TGTATTCGGG TGAGCGACCG GGGATTGGGG
ATTAGTGAAG CTGATTGCGG GCACGTATTC GACCGTTATT ATCGCGTCGA AAGTGATCCC
ATCAGTCAGG CCTCCGGGTT CGGGATTGGA CTTTATTTAA GCGCTGAGAT TGTTCATCGC
CACGACGGCA AAATTTGGGT AGAGAGTGAA ATTGGGAAGG GTTCGCAGTT TTATTTTAGT
TTGCCCCTTG AAGGAATCAG GAAGCCAGAG GTTGGTGATT AA
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| Protein sequence | MAEINKPSKD TLSALETAPN MYLILSPDLY ILTASDLYLQ ATKTTRDAIK GKHIFEAFPD
NPDLPDADGV QNINASLQVV LRTKKPDQMP IQRYDVPDME NPGKFIRRYW DPCHSPVLDS
EGNISYIIQL ATNVTDKILA ERALHQSHLE NLETTEQVSA LNAELLATNV ELRETQRQLT
LLNEQLEGRV AKRTDELRQA VEEQAAVNEE MEATNEELIQ IQQNLEQINR ELTAGESRFR
MAVESTGLGT WDYIPATGEL QWSKECRMIF GLDGDQPVDF ETYTRHIFPE DRQFVASRIN
SSLQSKFSGR YEITHRIIRF DNKEVRWVKA QGTVQFQAGK ASRFLGTVLD ITELKQVEEK
SARLAAIVAT SNDAIISKTL ESVITSWNDS AERMFGYTST EIIGETIYKL IPADRQDEEP
MILTRLKAGE RVEHFETKRQ TKDGRLIDVS LTISPIKDSH GNITGFSKIA RDISERKQND
IRKNDFIAMV SHEIKTPLTS MSAILQMLQR KFAESEDVLV SQLLDRANLQ VKKMNKMISG
FLNISRLESG KIQINRQVFN ICELIKEVVA EINLTGINHI INIRECEDAV VMADREKIDS
VLSNLLGNAI KYSPKGSEVT IDCYKQDSYV CIRVSDRGLG ISEADCGHVF DRYYRVESDP
ISQASGFGIG LYLSAEIVHR HDGKIWVESE IGKGSQFYFS LPLEGIRKPE VGD
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