| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_0839 |
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| Symbol | |
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| ID | 7268291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chloroflexus aggregans DSM 9485 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011831 |
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| Strand | + |
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| Start bp | 1043131 |
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| End bp | 1046754 |
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| Gene Length | 3624 bp |
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| Protein Length | 1207 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643565688 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_002462197 |
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| Protein GI | 219847764 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAACA TGTCTCCGAT CCAACGGCTG ATCCAAGCCT ATATCGGTGG TCTTATCCTG
ATCGCACTGG CGTCGATCGG TGGGTATTGG CTCTTGACCG TCCACTCACA ACGGCTGGAC
CAGTACGACC AGCTTCTCAA CACCACCCAC CAACAACAGA TTCGCGCACA GCAGATCGCC
TTGCTCGCCA ACGAGTTGGC ACTGTTTGCC GATGCCTCAC AAGCAGCTTC TCTTCGAGCT
GAACTGCATG TGCTCAGAGA CGAACTCTGG CAAACCCATC AGCGCTTGCT CGCCGACATA
CCGGCTGACG TGCTCGATCA TACAACCACA ACCCTCGAAC GATTCCTTAC CTACGTCGAC
AACCTTGTCG CCGCACCGCC TGCGTTGCTC AACCGCGACA ATACCGACCT CCGGGCGATT
CAGACCAACC TCATCGTCGT TCAGAGCGAT CTGAGCGCAA CGAGTAGCAT CTTGCTAATG
CAAAGCCAGG CGTTACGCGG TCAGATTACT TTGATCCAAG CCGGTGTTGT CGTGCTGATC
CTTTCACTAT TGATTGCCGG GGTTTTCCTG ATTATCCGAC CCTACGCCCG TAGAGCACGC
CGTGAAGCCG AGCAACTCCG CATGCTCTCA CTGGTAGCAC GTTATACCGA TAATGCGGTG
ATTATTACCG ACCGTACCGG ACGGATCGAA TGGGTGAACG AAGGTTTCAC CCGTATCTCC
GGCTACACCC TTGATGAAGT GCGTGGTGAG AAACTAGGTG ATCTCCTCCA AGGACCAGAA
ACAGACCAAG AAACGGTCGC AGCAATTAGC CGGGCGATTC GGAATGGTGA ATCGATCAAA
ACCGAAATCC TTAACTATAC AAAAAACGGT CATCCCTATT GGTTATCACT TGACATTTCA
CCGGTGTACG ATGAACAGCA CCATCTTACT CACTTCATCG CGATAGAATC AGACATTACC
CATCAGAAAG AGATGGAGCG CATGTTACGA TCGGCACTCA AAGAGAGCCG TGATATTATG
AATGCGCTCG ATCAATCGAC AATTTTATCA ATTGCCGATC CCGAAGGGCG TATTCTGGAA
GTAAATGAAC GTTTCTGTGC AATTACCGGC TATCGACCAG ATGAGTTGAT CGGGAAAGAT
CATCGTATCT TTAAATCAGG TGTTCATACA CCAGAGTTTT TTGCCGATTT GTGGAACACG
ATCAAGGCTG GCCGGATTTG GCGTAATGAG ATCTGCAACC GGGCTAAAGA TGGTCATTTG
TTCTGGGTAG ATACGACGAT TGTCCCGTTT ATCGGTGATA ACGGTCAGCC CGAACGTTAC
CTCGCCGTGC GCTTCGACAT CACCGGTCGT AAGAAGAGCG AAGAACAGTT GCGCGCCAGC
GAGACGCGCT ACCGTTCGGT GATTACGGCC ATGAGTGAGG GCATCGTCGT TATGAATAAA
TCTGGTGTGA TTGAGACGTG TAACACCAGC GCCGAACGCA TTCTCGGCCT CAGCTACGAT
CAACTCGTCG GGCGCACCGG TTTCGATCCG CGTTGGGAGG CAATCCACGA AGATGGCACG
CCGTTTCCCG GCGAAGAACA CCCGATTATG GTTTCGCTCA CCACCGGTCG CCCGCAAAGC
GATGTGGTGA TGGGTATCCG CAAACCAAGT GGTGAACTGA TCTGGATTTC GATCAACTCA
CAGCCACTCT GCGACGAGCA CGGGAATGTC TATGCTGCCG TCGCCAGTTT CCACGACATT
ACCGCCCGCC GGAATGCCGA ACAAGAGCTA CGTTTTCAAA AGACGTTGCT CGAATGCCAG
ACGGAAGCGT CACCTGATGG CGTATTGGTC GTTTCACCCG ATCGGCGTTG TCTCTATGCC
AACCAACGCT TCCGCGAGAT GTGGAAGATA ACCGGTTCCC CCATCGAGCA AGCGACATGC
GCTGCCAGTA TGGAACTCAT GCTTGCGCAG GTCTGCGATC CTGAGCGAGT ACGCAACGAA
ATTGAAGAGC TGTACGCGAA TCCAAACCTG ACCGGCAAAA CGGAAATTGA ATTGAAAGAC
GGTCGTACCT TCGAGCGCTA CAGCGCACCG GTGATCAGCA GTGAAGGTGA TTATTACGGA
CGAGTCTGGT TCTTCCGCGA TGTCACCGAA CGACGGGCAA TCGAGCGCAT GAAGAACGAG
TTCGTGGCCG TTGTGTCACA CGAGCTGCGC ACACCACTTA CGTCGATCCG CGGCTCCTTA
GGCCTGATTG CCGGTGGTGT GGCCGGGGAA TTGCCACCAC GCGCTGCGGC AATGATCGAT
ATTGCCTTGA AGAATAGCGA GCGTCTGGTA CGCCTCATTA ACGACATCCT CGACATCGAG
AAGATCGAAT CGGGTAAGAT GGTCTTTAAG ATGCAACCCG TCGTGCTCGA TGAACTGGTC
CGTCAGACCA TCGAGGCGAA CCGCGGTTTT GGTCAGCAGT ACAATGTTCA GATTGAACTC
ACCGCTACCT TGCCCGGTGT CCAGGTCTAC GTCGATCCCG ACCGGATGAC ACAGGTCATC
ACAAACCTGA TCTCGAATGC GGTGAAATTC TCCCCGCCGG GGTGCAAAGT CGAAGTCGCG
ATTGGCCGCG AACCGCAGGG ACGGGTACGG ATTACTGTTA CCGATCACGG GCCGGGTATT
CCTCCTGAGT TTCGTGATCG TATCTTCCAG AAGTTTGCGC AAGCCGATTC CTCGAACACT
CGCCAGCAAG GCGGTACCGG TCTTGGTCTG AGCATTAGTC GGGCGATTGT GGAGCGCCAT
GGCGGACAGA TCGGCTTCGT GACGGCAACC GGTGTCGGTA CCACGTTCTA CGTTGATTTG
GCCGAATATC GTCCCAATAC AACCAGTATG CCACCACTGC CAACGCGACA GCGTGCGCCA
CGCATCCTGA TTTGTGAAGA CGATCCAGAC ATCGGTGCCT TGCTGTCGTT GATATTACAA
CAGGCCGGCT ATGCTACCGA TGTAGCGCAT TCCCTCGACG AAGCGCGTGA CTTACTCACT
CAACACGACT ACCGGGCGAT GACTCTTGAT CTGATATGGC CTAACGACGA TGGGAAAACT
TTTATTCAAG AAGTACGCGC CAATGAAAAG GTTCGCGATT TGCCGATTAT CGTAGTATCG
GCCCGTGCTA GCGAAGCGCA GATCACGAGC GACGAGCAGC TTGATGTGGT AGACTGGTTA
CCCAAACCAA TCGATCAACA ACGTCTGCTC GCTGCTCTCC AACGCACAGC CCGCCGCAAG
AACACCGGTC GCCCACAAAT CTTGCACGTC GAAGACGATA ACGATGTCTT CACCGTGATA
AGCACGTTAC TGGCCGATAT TGCCGACGTT CATCAAGCGG CAACACTAAC TGACGCTCAA
CGTCTCCTAC AGGCGCAATC GTTTGATCTA GTTATTCTCG ATCAAAACCT GCCCGATGGA
AGCGGGATTG AACTCTTGCC TCTCATTGAA CAGCAACAAC CACCACTACC GGTCATTCTC
TTTTCGGTGC GTGATTTTGA GCCTGATGTT ACCGGTAGAA TCGCGGTCAC CCTCGTCAAA
TCACGCAACT CGAACACCGA ATTGCGGAAC ACTGTGGTGC GATTGCTCAA TCAGGCAGCG
GTACTGTCAT CGTCGAACAT GTGA
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| Protein sequence | MANMSPIQRL IQAYIGGLIL IALASIGGYW LLTVHSQRLD QYDQLLNTTH QQQIRAQQIA
LLANELALFA DASQAASLRA ELHVLRDELW QTHQRLLADI PADVLDHTTT TLERFLTYVD
NLVAAPPALL NRDNTDLRAI QTNLIVVQSD LSATSSILLM QSQALRGQIT LIQAGVVVLI
LSLLIAGVFL IIRPYARRAR REAEQLRMLS LVARYTDNAV IITDRTGRIE WVNEGFTRIS
GYTLDEVRGE KLGDLLQGPE TDQETVAAIS RAIRNGESIK TEILNYTKNG HPYWLSLDIS
PVYDEQHHLT HFIAIESDIT HQKEMERMLR SALKESRDIM NALDQSTILS IADPEGRILE
VNERFCAITG YRPDELIGKD HRIFKSGVHT PEFFADLWNT IKAGRIWRNE ICNRAKDGHL
FWVDTTIVPF IGDNGQPERY LAVRFDITGR KKSEEQLRAS ETRYRSVITA MSEGIVVMNK
SGVIETCNTS AERILGLSYD QLVGRTGFDP RWEAIHEDGT PFPGEEHPIM VSLTTGRPQS
DVVMGIRKPS GELIWISINS QPLCDEHGNV YAAVASFHDI TARRNAEQEL RFQKTLLECQ
TEASPDGVLV VSPDRRCLYA NQRFREMWKI TGSPIEQATC AASMELMLAQ VCDPERVRNE
IEELYANPNL TGKTEIELKD GRTFERYSAP VISSEGDYYG RVWFFRDVTE RRAIERMKNE
FVAVVSHELR TPLTSIRGSL GLIAGGVAGE LPPRAAAMID IALKNSERLV RLINDILDIE
KIESGKMVFK MQPVVLDELV RQTIEANRGF GQQYNVQIEL TATLPGVQVY VDPDRMTQVI
TNLISNAVKF SPPGCKVEVA IGREPQGRVR ITVTDHGPGI PPEFRDRIFQ KFAQADSSNT
RQQGGTGLGL SISRAIVERH GGQIGFVTAT GVGTTFYVDL AEYRPNTTSM PPLPTRQRAP
RILICEDDPD IGALLSLILQ QAGYATDVAH SLDEARDLLT QHDYRAMTLD LIWPNDDGKT
FIQEVRANEK VRDLPIIVVS ARASEAQITS DEQLDVVDWL PKPIDQQRLL AALQRTARRK
NTGRPQILHV EDDNDVFTVI STLLADIADV HQAATLTDAQ RLLQAQSFDL VILDQNLPDG
SGIELLPLIE QQQPPLPVIL FSVRDFEPDV TGRIAVTLVK SRNSNTELRN TVVRLLNQAA
VLSSSNM
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