| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4313 |
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| Symbol | |
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| ID | 5107087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4726085 |
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| End bp | 4728982 |
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| Gene Length | 2898 bp |
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| Protein Length | 965 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640505579 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_001189792 |
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| Protein GI | 146309327 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.975749 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACA GCATCACGCT ACGCCTGCAA CTGCTCGGAC AGTTGTTCAG CCGCGCCAAT
CTGCTGGCCT GGGGCGTGCT GGCGCTGGCC CTGGGCGCGA CCCTGCTGGC CTGGGACGGT
CTGCGCCAGA GCCAGACCGC GTCCGCCACG CGCCAGCTCG AACTGCTCGC CGACGAAATC
AGCGAGGCCA TCGTCCAGCG CATGCATGAC CAGGAAAGCA TCCTGCTGGG AGCCGCCGCA
ATGCTCGACG CCAGCGAGCA CGTCAGCCGC GATGACTGGC GCACCTATGC CCGCCGCCTG
AATCTGCAGG AACGCTACCC GGGCATCCAG GGCCTGGGGT TCAGTCAGGT GCTGCCCGCC
GAGCAATTGC ATGCCTTCGA AACCGAGCTA CGCACCGAGG GCTATCCCAA CTTCCGCGTG
CGCCCGCTGG GCCAGCGCGC GCTGTACAGC GCCATCCGCT TTATCGAGCC GTTCGCCGGG
CGCAACCTGG CCGCCTTCGG CTTCGACATG CTGTCCGAGC CAGTGCGCCA GGCGGCCATG
CTGAGCGCCG CCCGCAGCGG CCAGAGCCGT CTGTCCGGCC GTGTCACCCT GGTTCAGGAA
ACCCACGGCA AGGTGCAGCC TGGCCTGCTG CTGTACACCC CGGTGTATCA GCCCGGGCAG
CCACTGGACA CGCCCGAGCA GCGCCTGGCC GCGCTGCGTG GTTTTGCCTA CAGCCCCTAC
CGCACCCACG ATCTGATGCA CGGCATCCTC GGTGCGCGCC AACGTGACCT GGAGTTCGCC
CTCTACGCCA GCCCCGATAC CAGCACCGTC AACCTGCTCT ACAGCAGCAG TGACAGCATC
CTCGACACGC CGGTCGATAC CCAGCGGCAG CTGGACATGT TCGGTCAGCA GTGGCACCTG
AACTTCTACT ACGCCCCGGG TTTTCTCGAC GCTGCCCATC GCGGCGAGGG CTCGCTGCTG
GCCCTCGGCA TCTGCATCAG CCTGCTGCTG TTCTTCCTGA TCAGCAGCCT CAGCCTGCGC
CGTGAGCAGG TCCAGCAACT GGCCGAGCGC ATCACCGAGC AGCTGCACCG CAGCGAAGAG
CGCCTGGCCC TGGCCCTCAA GGGCAGCAAC GACGGCTGGT GGGACATCGA CGTCCAGGCC
GGCAGCTTCT TCGCCTCGGC GCGCGGCTGG CAGATGCTCG GCTACCCCGA GCAGGGCCCG
CCCGGCTTTG CCGACGATCC GCTGAGCTGG GAGCAGCTGG TGCACCCGGA AGACCTGCCG
GCCACCCGCG CGCAGGTGAA ACAGGTGCTG CGCGAGGGCA TCAGCAACTT CACCCTGGAA
TGCCGCCTGC TCTGCGCGGA CGGCCAGGTG CTGCCGATCC TGCTGCGTGG CTACATCCAG
CGCGACGCCA GCGGCTACCC GCTGCGCATC ACCGGTACCG CCATGGACCA GAGCGAGGTC
AAGCGCATCG AACGGCTGAA GAGCGAGTTC GTCTCCACCG TCAGCCACGA ACTGCGCACG
CCCCTGACCG CCATCGCCGG CTCGCTCGGC CTGATCAACG GCGGCGCCCT CGGTGTGGTG
CCGGAAGGCA TGCGCCAGAT GCTGAGCATC GCCCAGGCCA ACAGCCAGCG CCTCAGCCAT
CTGATCAACG ACCTGCTGGA CATGGACAAG CTGGAAGCCG GCAAGATGCA GTTCGATCTG
CAGCCCTGCG AACTCGCCGG CCAGCTCGAG GAGGCGCTGG CCAGCAACCA GGCCTACGCC
GCCCAGCGCC AGGTGCAGCT GCGCCTGCTC GACTGCCCGC CGGTGCGCGT ACGGGTCGAT
AACATGCGCC TGCAGCAGGT TCTGGCCAAC TTCATTTCCA ATGCCGTGAA GTACTCGCCA
CCCGCTGGTG AAGTGCTGCT GCGCGCCGAG CGCCGTGACA CCCGCGTGCG AGTCGAGGTC
AGCGACCAGG GCTCGGGCAT CGCCGCCGCC TTCCGTGATC GCATCTTCGC CAAGTTCTCC
CAGGCCGACG CCAGCGACAG CCGCGAGAAA GGCGGCACCG GCCTGGGCCT GGCGATCAGC
AAGGAACTGA TCGAGCGCAT GGGCGGGCAG ATCGGCTTCG ACTCGGTGGT CGGTCAGGGC
AGCACCTTCT GGTTCGAGCT GCCGCTTCTG CTCGAGGCCG GCCGCAGCGA GCCGGGCGAT
GGCCGCCCCA GCCTGCTGGT GGTGGAGGAC GAGCCGGACA TCGCCGCCCT GCTGCGCCAG
TTGCTCGAAG ATGCCGGCTA CCGTGTGCGC CTGGCCCACA GCCTGGCCGA GGCGCGCGCC
TGCCTGCACG AGGAAACGCC GGCGGCCATC AGCCTGGACC TGCGTCTGCC GGACGGCGAC
GGCCTGCAGC TGGTGCAGGA ACTGCGCGCC GACGAGCGCT ACCGCGACCT GCCGATTCTG
GTGGTATCGG CCGCCTGCGA GGAAGGTCGC CTGGCGCTCG AGGGTGTGCC GGCACTGGAC
TGGCTGAGCA AACCGATTGA TCCCCAGCGC CTGCTCGGCA GCCTCGCCCA GGCCCTGCAG
CACCTCCCTC ACAGCCCGCG CGTGCTGCAT GTCGAAGACG ACCACGACCT GCGCCTGGTC
GTCGCCGAAC AGGGGCGCGA CCTGGCCGAG TTCGTGCCCG CCGAGAGCCT GGCCGAAGCG
CGTCGCCTGC TCGCCGAACA GCGCTTCGAT CTGGTCCTGC TCGACCTCGG CCTGCCCGAC
GGCAACGGTC TGGAACTGGT CGACGAACTG CAGCGCCAGC GCCCGCGTCT ACCGGTGGCG
GTGCTCTCGG CCAGCGAGCT GGACGGCCGC CAACTCGCCG GCGTGAGCGC CGCGCTGGCC
AAATCGCGCA ATGATGGGCA ACACTTCCTG CACACGCTCA CCCGCCTGCT ACCTGCCAAG
GAGACCGGCC ATGACTGA
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| Protein sequence | MSDSITLRLQ LLGQLFSRAN LLAWGVLALA LGATLLAWDG LRQSQTASAT RQLELLADEI
SEAIVQRMHD QESILLGAAA MLDASEHVSR DDWRTYARRL NLQERYPGIQ GLGFSQVLPA
EQLHAFETEL RTEGYPNFRV RPLGQRALYS AIRFIEPFAG RNLAAFGFDM LSEPVRQAAM
LSAARSGQSR LSGRVTLVQE THGKVQPGLL LYTPVYQPGQ PLDTPEQRLA ALRGFAYSPY
RTHDLMHGIL GARQRDLEFA LYASPDTSTV NLLYSSSDSI LDTPVDTQRQ LDMFGQQWHL
NFYYAPGFLD AAHRGEGSLL ALGICISLLL FFLISSLSLR REQVQQLAER ITEQLHRSEE
RLALALKGSN DGWWDIDVQA GSFFASARGW QMLGYPEQGP PGFADDPLSW EQLVHPEDLP
ATRAQVKQVL REGISNFTLE CRLLCADGQV LPILLRGYIQ RDASGYPLRI TGTAMDQSEV
KRIERLKSEF VSTVSHELRT PLTAIAGSLG LINGGALGVV PEGMRQMLSI AQANSQRLSH
LINDLLDMDK LEAGKMQFDL QPCELAGQLE EALASNQAYA AQRQVQLRLL DCPPVRVRVD
NMRLQQVLAN FISNAVKYSP PAGEVLLRAE RRDTRVRVEV SDQGSGIAAA FRDRIFAKFS
QADASDSREK GGTGLGLAIS KELIERMGGQ IGFDSVVGQG STFWFELPLL LEAGRSEPGD
GRPSLLVVED EPDIAALLRQ LLEDAGYRVR LAHSLAEARA CLHEETPAAI SLDLRLPDGD
GLQLVQELRA DERYRDLPIL VVSAACEEGR LALEGVPALD WLSKPIDPQR LLGSLAQALQ
HLPHSPRVLH VEDDHDLRLV VAEQGRDLAE FVPAESLAEA RRLLAEQRFD LVLLDLGLPD
GNGLELVDEL QRQRPRLPVA VLSASELDGR QLAGVSAALA KSRNDGQHFL HTLTRLLPAK
ETGHD
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